RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
DNMT3A-208ENST00000466601 PKIGQ9Y2B9 76 aa9.26□□□□□ -0.93
DNMT3A-208ENST00000466601 HERC2O95714 4834 aa9.25□□□□□ -0.93
DNMT3A-208ENST00000466601 COX7B2Q8TF08 81 aa9.25□□□□□ -0.93
DNMT3A-208ENST00000466601 C6orf48Q9UBA6 75 aa9.25□□□□□ -0.93
DNMT3A-208ENST00000466601 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.25□□□□□ -0.93
DNMT3A-208ENST00000466601 LOC107984640A0A0U1RRK4 108 aa9.24□□□□□ -0.93
DNMT3A-208ENST00000466601 PANO1I0J062 215 aa9.24□□□□□ -0.93
DNMT3A-208ENST00000466601 CHTF8P0CG12 524 aa9.24□□□□□ -0.93
DNMT3A-208ENST00000466601 IGLV5-39A0A0G2JS06 123 aa9.23□□□□□ -0.93
DNMT3A-208ENST00000466601 TRBV30A0A0K0K1B3 111 aa9.23□□□□□ -0.93
DNMT3A-208ENST00000466601 CXCL5P42830 114 aa9.23□□□□□ -0.93
DNMT3A-208ENST00000466601 CIRBPQ14011 172 aaKnown RBP9.23□□□□□ -0.93
DNMT3A-208ENST00000466601 SCXQ7RTU7 201 aa9.23□□□□□ -0.93
DNMT3A-208ENST00000466601 A0A096LNI7 61 aa9.22□□□□□ -0.93
DNMT3A-208ENST00000466601 IGKV2-24A0A0C4DH68 120 aa9.22□□□□□ -0.93
DNMT3A-208ENST00000466601 TMEM223A0PJW6 202 aa9.22□□□□□ -0.93
DNMT3A-208ENST00000466601 SYS1-DBNDD2H3BUS1 97 aa9.22□□□□□ -0.93
DNMT3A-208ENST00000466601 CIRBP-AS1Q8TBR5 109 aa9.22□□□□□ -0.93
DNMT3A-208ENST00000466601 DPH3Q96FX2 82 aa9.22□□□□□ -0.93
DNMT3A-208ENST00000466601 PMCHL2Q9BQD1 86 aa9.22□□□□□ -0.93
DNMT3A-208ENST00000466601 HSPG2P98160 4391 aa9.21□□□□□ -0.93
DNMT3A-208ENST00000466601 DPM2O94777 84 aa9.21□□□□□ -0.94
DNMT3A-208ENST00000466601 S100A6P06703 90 aa9.21□□□□□ -0.94
DNMT3A-208ENST00000466601 PLNP26678 52 aa9.21□□□□□ -0.94
DNMT3A-208ENST00000466601 GAGE2BQ13066 116 aa9.21□□□□□ -0.94
DNMT3A-208ENST00000466601 SPACA4Q8TDM5 124 aa9.21□□□□□ -0.94
DNMT3A-208ENST00000466601 IGKCP01834 107 aa9.2□□□□□ -0.94
DNMT3A-208ENST00000466601 TLX1NBP0CAT3 122 aa9.2□□□□□ -0.94
DNMT3A-208ENST00000466601 PTTG1IPP53801 180 aa9.2□□□□□ -0.94
DNMT3A-208ENST00000466601 RPL18AQ02543 176 aaKnown RBP9.2□□□□□ -0.94
DNMT3A-208ENST00000466601 MAJINQ3KP22 176 aa9.2□□□□□ -0.94
DNMT3A-208ENST00000466601 PET117Q6UWS5 81 aa9.2□□□□□ -0.94
DNMT3A-208ENST00000466601 LINC00474Q9P2X8 69 aa9.2□□□□□ -0.94
DNMT3A-208ENST00000466601 C3orf79P0CE67 100 aa9.19□□□□□ -0.94
DNMT3A-208ENST00000466601 C9orf116Q5BN46 136 aaPredicted RBP9.19□□□□□ -0.94
DNMT3A-208ENST00000466601 HIST3H2BBQ8N257 126 aa9.19□□□□□ -0.94
DNMT3A-208ENST00000466601 A0A087WYN8 130 aa9.18□□□□□ -0.94
DNMT3A-208ENST00000466601 SMR3BP02814 79 aaPredicted RBP9.18□□□□□ -0.94
DNMT3A-208ENST00000466601 KRTDAPP60985 99 aa9.18□□□□□ -0.94
DNMT3A-208ENST00000466601 Q6ZRP5 223 aa9.18□□□□□ -0.94
DNMT3A-208ENST00000466601 PCLOQ9Y6V0 5065 aa9.18□□□□□ -0.94
DNMT3A-208ENST00000466601 S100A2P29034 98 aa9.17□□□□□ -0.94
DNMT3A-208ENST00000466601 LINC01545Q5VT33 79 aa9.17□□□□□ -0.94
DNMT3A-208ENST00000466601 STPG4Q8N801 248 aa9.17□□□□□ -0.94
DNMT3A-208ENST00000466601 NDUFC2-KCTD14E9PQ53 114 aa9.16□□□□□ -0.94
DNMT3A-208ENST00000466601 SNRPEP62304 92 aaKnown RBP9.16□□□□□ -0.94
DNMT3A-208ENST00000466601 GAGE2EQ4V326 116 aa9.16□□□□□ -0.94
DNMT3A-208ENST00000466601 Q8N1X5 172 aa9.16□□□□□ -0.94
DNMT3A-208ENST00000466601 PLAC8Q9NZF1 115 aa9.16□□□□□ -0.94
DNMT3A-208ENST00000466601 GAGE2DQ9UEU5 116 aa9.16□□□□□ -0.94
DNMT3A-208ENST00000466601 HERVK_113P61574 105 aa9.15□□□□□ -0.94
DNMT3A-208ENST00000466601 HIST1H2BLQ99880 126 aa9.15□□□□□ -0.94
DNMT3A-208ENST00000466601 SFTA2Q6UW10 78 aa9.14□□□□□ -0.95
DNMT3A-208ENST00000466601 C20orf202A1L168 122 aa9.13□□□□□ -0.95
DNMT3A-208ENST00000466601 LEPROTO15243 131 aa9.13□□□□□ -0.95
DNMT3A-208ENST00000466601 PLEKHB2Q96CS7 222 aa9.13□□□□□ -0.95
DNMT3A-208ENST00000466601 ZNF625Q96I27 306 aaPredicted RBP9.13□□□□□ -0.95
DNMT3A-208ENST00000466601 C5orf52A6NGY3 159 aa9.12□□□□□ -0.95
DNMT3A-208ENST00000466601 FAM229AH3BQW9 127 aa9.12□□□□□ -0.95
DNMT3A-208ENST00000466601 LINC00528Q8N1L1 170 aa9.12□□□□□ -0.95
DNMT3A-208ENST00000466601 A0A1W2PNN7 141 aa9.11□□□□□ -0.95
DNMT3A-208ENST00000466601 EPM2AB3EWF7 344 aa9.11□□□□□ -0.95
DNMT3A-208ENST00000466601 ERG28Q9UKR5 140 aa9.11□□□□□ -0.95
DNMT3A-208ENST00000466601 J3QQQ9 107 aa9.1□□□□□ -0.95
DNMT3A-208ENST00000466601 PFN2P35080 140 aa9.1□□□□□ -0.95
DNMT3A-208ENST00000466601 TSPEAR-AS2P59090 65 aa9.1□□□□□ -0.95
DNMT3A-208ENST00000466601 C9orf129Q5T035 196 aaKnown RBP9.1□□□□□ -0.95
DNMT3A-208ENST00000466601 Q5VSD8 79 aa9.1□□□□□ -0.95
DNMT3A-208ENST00000466601 NDUFA12Q9UI09 145 aa9.1□□□□□ -0.95
DNMT3A-208ENST00000466601 FAT1Q14517 4588 aa9.1□□□□□ -0.95
DNMT3A-208ENST00000466601 MYMXA0A1B0GTQ4 84 aa9.09□□□□□ -0.95
DNMT3A-208ENST00000466601 E9PLD3 99 aa9.09□□□□□ -0.95
DNMT3A-208ENST00000466601 HERV-K104P63124 156 aa9.09□□□□□ -0.95
DNMT3A-208ENST00000466601 COX17Q14061 63 aa9.09□□□□□ -0.95
DNMT3A-208ENST00000466601 XAGE1AQ9HD64 81 aa9.09□□□□□ -0.95
DNMT3A-208ENST00000466601 FAM168BA1KXE4 195 aa9.08□□□□□ -0.96
DNMT3A-208ENST00000466601 LGALS3P17931 250 aaKnown RBP9.08□□□□□ -0.96
DNMT3A-208ENST00000466601 AKR1D1P51857 326 aa9.08□□□□□ -0.96
DNMT3A-208ENST00000466601 FAM19A5Q7Z5A7 132 aaPredicted RBP9.07□□□□□ -0.96
DNMT3A-208ENST00000466601 C7orf33Q8WU49 177 aa9.07□□□□□ -0.96
DNMT3A-208ENST00000466601 KRTAP4-5Q9BYR2 181 aa9.07□□□□□ -0.96
DNMT3A-208ENST00000466601 PLA2G1BP04054 148 aaKnown RBP9.06□□□□□ -0.96
DNMT3A-208ENST00000466601 NMUP48645 174 aa9.06□□□□□ -0.96
DNMT3A-208ENST00000466601 LINC00158P58513 81 aa9.06□□□□□ -0.96
DNMT3A-208ENST00000466601 MEIG1Q5JSS6 88 aa9.06□□□□□ -0.96
DNMT3A-208ENST00000466601 ATOH7Q8N100 152 aa9.06□□□□□ -0.96
DNMT3A-208ENST00000466601 LINC00587B1AMM8 73 aa9.05□□□□□ -0.96
DNMT3A-208ENST00000466601 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
DNMT3A-208ENST00000466601 A0A0U1RRA0 63 aa9.04□□□□□ -0.96
DNMT3A-208ENST00000466601 SMIM13P0DJ93 91 aa9.04□□□□□ -0.96
DNMT3A-208ENST00000466601 RPL37AP61513 92 aaKnown RBP9.04□□□□□ -0.96
DNMT3A-208ENST00000466601 PHF5AQ7RTV0 110 aaKnown RBP9.04□□□□□ -0.96
DNMT3A-208ENST00000466601 SND1-IT1Q9HBX3 110 aa9.04□□□□□ -0.96
DNMT3A-208ENST00000466601 IGKV2D-26A0A0A0MRZ7 120 aa9.03□□□□□ -0.96
DNMT3A-208ENST00000466601 SERTAD4-AS1Q5TG53 156 aa9.03□□□□□ -0.96
DNMT3A-208ENST00000466601 TMA7Q9Y2S6 64 aaKnown RBP9.03□□□□□ -0.96
DNMT3A-208ENST00000466601 M0QXV9 152 aa9.02□□□□□ -0.97
DNMT3A-208ENST00000466601 PLA2G2DQ9UNK4 145 aa9.02□□□□□ -0.97
DNMT3A-208ENST00000466601 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms