RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
PTPRU-206ENST00000465525 C2orf82Q6UX34 121 aa11.31□□□□□ -0.6
PTPRU-206ENST00000465525 PLEKHB2Q96CS7 222 aa11.31□□□□□ -0.6
PTPRU-206ENST00000465525 TP73-AS1Q9UF72 201 aa11.31□□□□□ -0.6
PTPRU-206ENST00000465525 C6orf226Q5I0X4 101 aa11.3□□□□□ -0.6
PTPRU-206ENST00000465525 CFAP161Q6P656 301 aa11.3□□□□□ -0.6
PTPRU-206ENST00000465525 PCP2Q8IVA1 136 aa11.3□□□□□ -0.6
PTPRU-206ENST00000465525 DLEU1O43261 78 aa11.3□□□□□ -0.6
PTPRU-206ENST00000465525 LGALS3P17931 250 aaKnown RBP11.3□□□□□ -0.6
PTPRU-206ENST00000465525 COL5A1-AS1Q5SY13 56 aa11.3□□□□□ -0.6
PTPRU-206ENST00000465525 GVQW2A0A096LPI5 108 aaPredicted RBP11.29□□□□□ -0.6
PTPRU-206ENST00000465525 ZNF561-AS1K7EIQ3 104 aa11.29□□□□□ -0.6
PTPRU-206ENST00000465525 BATFQ16520 125 aa11.29□□□□□ -0.6
PTPRU-206ENST00000465525 LINC00336Q6ZUF6 198 aa11.29□□□□□ -0.6
PTPRU-206ENST00000465525 Q8IZM0 81 aa11.29□□□□□ -0.6
PTPRU-206ENST00000465525 TNP2Q05952 138 aa11.28□□□□□ -0.6
PTPRU-206ENST00000465525 A0A1B0GV90 55 aa11.27□□□□□ -0.6
PTPRU-206ENST00000465525 BOD1L2Q8IYS8 172 aa11.27□□□□□ -0.6
PTPRU-206ENST00000465525 ZNF625Q96I27 306 aaPredicted RBP11.27□□□□□ -0.6
PTPRU-206ENST00000465525 FRAS1Q86XX4 4008 aa11.27□□□□□ -0.61
PTPRU-206ENST00000465525 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.27□□□□□ -0.61
PTPRU-206ENST00000465525 A0A087WTM6 91 aa11.27□□□□□ -0.61
PTPRU-206ENST00000465525 CKS1BP61024 79 aa11.27□□□□□ -0.61
PTPRU-206ENST00000465525 C10orf25Q5T742 122 aa11.27□□□□□ -0.61
PTPRU-206ENST00000465525 NTN5Q8WTR8 489 aaPredicted RBP11.27□□□□□ -0.61
PTPRU-206ENST00000465525 NDUFA12Q9UI09 145 aa11.27□□□□□ -0.61
PTPRU-206ENST00000465525 UNQ6190/PRO20217Q6UXQ8 127 aa11.26□□□□□ -0.61
PTPRU-206ENST00000465525 ZNF815PA8K554 130 aa11.25□□□□□ -0.61
PTPRU-206ENST00000465525 FUSP35637 526 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTPRU-206ENST00000465525 HINT1P49773 126 aaPredicted RBP11.25□□□□□ -0.61
PTPRU-206ENST00000465525 CAMK2N2Q96S95 79 aa11.25□□□□□ -0.61
PTPRU-206ENST00000465525 DNAH17Q9UFH2 4485 aa11.25□□□□□ -0.61
PTPRU-206ENST00000465525 SLPIP03973 132 aa11.24□□□□□ -0.61
PTPRU-206ENST00000465525 NDUFA1O15239 70 aa11.24□□□□□ -0.61
PTPRU-206ENST00000465525 Q6ZRU5 148 aa11.23□□□□□ -0.61
PTPRU-206ENST00000465525 Q8N814 137 aa11.23□□□□□ -0.61
PTPRU-206ENST00000465525 MYMXA0A1B0GTQ4 84 aa11.22□□□□□ -0.61
PTPRU-206ENST00000465525 C14orf177Q52M58 125 aa11.22□□□□□ -0.61
PTPRU-206ENST00000465525 C9orf116Q5BN46 136 aaPredicted RBP11.22□□□□□ -0.61
PTPRU-206ENST00000465525 C2orf91Q6ZV80 131 aa11.22□□□□□ -0.61
PTPRU-206ENST00000465525 SYCNQ0VAF6 134 aa11.21□□□□□ -0.61
PTPRU-206ENST00000465525 C2orf48Q96LS8 159 aa11.21□□□□□ -0.61
PTPRU-206ENST00000465525 CXCL5P42830 114 aa11.2□□□□□ -0.62
PTPRU-206ENST00000465525 C6orf48Q9UBA6 75 aa11.2□□□□□ -0.62
PTPRU-206ENST00000465525 A0A0U1RRA0 63 aa11.2□□□□□ -0.62
PTPRU-206ENST00000465525 BVES-AS1Q5T3Y7 98 aa11.2□□□□□ -0.62
PTPRU-206ENST00000465525 CARD19Q96LW7 228 aa11.2□□□□□ -0.62
PTPRU-206ENST00000465525 A0A0J9YXY3 114 aa11.19□□□□□ -0.62
PTPRU-206ENST00000465525 HIGD1BQ9P298 99 aa11.19□□□□□ -0.62
PTPRU-206ENST00000465525 HSD52Q0P140 79 aa11.18□□□□□ -0.62
PTPRU-206ENST00000465525 FAT2Q9NYQ8 4349 aa11.18□□□□□ -0.62
PTPRU-206ENST00000465525 PFN2P35080 140 aa11.17□□□□□ -0.62
PTPRU-206ENST00000465525 MEIG1Q5JSS6 88 aa11.17□□□□□ -0.62
PTPRU-206ENST00000465525 SCGB1D4Q6XE38 83 aa11.17□□□□□ -0.62
PTPRU-206ENST00000465525 HERV-K104P63124 156 aa11.17□□□□□ -0.62
PTPRU-206ENST00000465525 LINC01620Q4KN68 170 aa11.17□□□□□ -0.62
PTPRU-206ENST00000465525 SMIM13P0DJ93 91 aa11.16□□□□□ -0.62
PTPRU-206ENST00000465525 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
PTPRU-206ENST00000465525 CNBPP62633 177 aaKnown RBP11.15□□□□□ -0.62
PTPRU-206ENST00000465525 F8WDY8 70 aa11.14□□□□□ -0.63
PTPRU-206ENST00000465525 SFTA2Q6UW10 78 aa11.14□□□□□ -0.63
PTPRU-206ENST00000465525 DAND5Q8N907 189 aa11.14□□□□□ -0.63
PTPRU-206ENST00000465525 TRBV30A0A0K0K1B3 111 aa11.14□□□□□ -0.63
PTPRU-206ENST00000465525 LINC00158P58513 81 aa11.14□□□□□ -0.63
PTPRU-206ENST00000465525 KRTAP10-2P60368 255 aa11.14□□□□□ -0.63
PTPRU-206ENST00000465525 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.13□□□□□ -0.63
PTPRU-206ENST00000465525 A0A1B0GVY2 172 aa11.13□□□□□ -0.63
PTPRU-206ENST00000465525 ADAMTSL4-AS1Q5T5F5 129 aa11.13□□□□□ -0.63
PTPRU-206ENST00000465525 PGPEP1Q9NXJ5 209 aa11.13□□□□□ -0.63
PTPRU-206ENST00000465525 A6NDN8 102 aa11.12□□□□□ -0.63
PTPRU-206ENST00000465525 LITAFQ99732 161 aa11.12□□□□□ -0.63
PTPRU-206ENST00000465525 PKD1P98161 4303 aa11.11□□□□□ -0.63
PTPRU-206ENST00000465525 IGLV5-52A0A0A0MRZ9 124 aa11.11□□□□□ -0.63
PTPRU-206ENST00000465525 NPC2P61916 151 aa11.11□□□□□ -0.63
PTPRU-206ENST00000465525 TAL2Q16559 108 aa11.11□□□□□ -0.63
PTPRU-206ENST00000465525 DNAH11Q96DT5 4516 aa11.1□□□□□ -0.63
PTPRU-206ENST00000465525 RPL18AQ02543 176 aaKnown RBP11.1□□□□□ -0.63
PTPRU-206ENST00000465525 CIRBPQ14011 172 aaKnown RBP11.09□□□□□ -0.63
PTPRU-206ENST00000465525 RNF151Q2KHN1 245 aa11.09□□□□□ -0.63
PTPRU-206ENST00000465525 MIR7-3HGQ8N6C7 128 aa11.09□□□□□ -0.63
PTPRU-206ENST00000465525 C9orf163Q8N9P6 203 aa11.09□□□□□ -0.63
PTPRU-206ENST00000465525 GAGE2EQ4V326 116 aa11.08□□□□□ -0.64
PTPRU-206ENST00000465525 Q6ZRP5 223 aa11.08□□□□□ -0.64
PTPRU-206ENST00000465525 GAGE2DQ9UEU5 116 aa11.08□□□□□ -0.64
PTPRU-206ENST00000465525 TIMM17BO60830 172 aa11.08□□□□□ -0.64
PTPRU-206ENST00000465525 TMEM238C9JI98 176 aa11.07□□□□□ -0.64
PTPRU-206ENST00000465525 NDUFC2-KCTD14E9PQ53 114 aa11.07□□□□□ -0.64
PTPRU-206ENST00000465525 GAGE2BQ13066 116 aa11.07□□□□□ -0.64
PTPRU-206ENST00000465525 COX17Q14061 63 aa11.07□□□□□ -0.64
PTPRU-206ENST00000465525 XAGE1AQ9HD64 81 aa11.07□□□□□ -0.64
PTPRU-206ENST00000465525 HECTD4Q9Y4D8 3996 aa11.06□□□□□ -0.64
PTPRU-206ENST00000465525 LOC107984640A0A0U1RRK4 108 aa11.06□□□□□ -0.64
PTPRU-206ENST00000465525 TAX1BP3O14907 124 aa11.06□□□□□ -0.64
PTPRU-206ENST00000465525 EIF4EBP3O60516 100 aaPredicted RBP11.06□□□□□ -0.64
PTPRU-206ENST00000465525 SRSF9Q13242 221 aaKnown RBP eCLIP11.05□□□□□ -0.64
PTPRU-206ENST00000465525 SND1-IT1Q9HBX3 110 aa11.05□□□□□ -0.64
PTPRU-206ENST00000465525 A0A096LNI7 61 aa11.04□□□□□ -0.64
PTPRU-206ENST00000465525 IGKV2-24A0A0C4DH68 120 aa11.04□□□□□ -0.64
PTPRU-206ENST00000465525 CHTF8P0CG12 524 aa11.04□□□□□ -0.64
PTPRU-206ENST00000465525 GCSHP23434 173 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms