RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 PNRC1Q12796 327 aaPredicted RBP13.57□□□□□ -0.24
USP42-205ENST00000465073 PAPPA-AS1Q5QFB9 102 aa13.57□□□□□ -0.24
USP42-205ENST00000465073 ANAPC16Q96DE5 110 aa13.57□□□□□ -0.24
USP42-205ENST00000465073 XAGE1AQ9HD64 81 aa13.57□□□□□ -0.24
USP42-205ENST00000465073 HERVK_113P63121 156 aa13.56□□□□□ -0.24
USP42-205ENST00000465073 NXT2Q9NPJ8 142 aaKnown RBP13.56□□□□□ -0.24
USP42-205ENST00000465073 F8VRH5 84 aa13.55□□□□□ -0.24
USP42-205ENST00000465073 G0S2P27469 103 aa13.55□□□□□ -0.24
USP42-205ENST00000465073 CTDSP1Q9GZU7 261 aa13.55□□□□□ -0.24
USP42-205ENST00000465073 TP73-AS1Q9UF72 201 aa13.55□□□□□ -0.24
USP42-205ENST00000465073 CDKN2A-AS1Q9UH64 79 aa13.55□□□□□ -0.24
USP42-205ENST00000465073 GEMIN7Q9H840 131 aaKnown RBP13.54□□□□□ -0.24
USP42-205ENST00000465073 MRPL55Q7Z7F7 128 aaKnown RBP13.52□□□□□ -0.25
USP42-205ENST00000465073 TIMM17AQ99595 171 aa13.52□□□□□ -0.25
USP42-205ENST00000465073 CXCL5P42830 114 aa13.51□□□□□ -0.25
USP42-205ENST00000465073 RPL28P46779 137 aaKnown RBP13.5□□□□□ -0.25
USP42-205ENST00000465073 TOMM6Q96B49 74 aa13.49□□□□□ -0.25
USP42-205ENST00000465073 BCE1O60756 84 aa13.48□□□□□ -0.25
USP42-205ENST00000465073 TSPAN13O95857 204 aa13.46□□□□□ -0.25
USP42-205ENST00000465073 ERASQ7Z444 233 aa13.46□□□□□ -0.25
USP42-205ENST00000465073 SMIM1B2RUZ4 78 aa13.44□□□□□ -0.26
USP42-205ENST00000465073 CRYGAP11844 174 aa13.44□□□□□ -0.26
USP42-205ENST00000465073 PDZD11Q5EBL8 140 aa13.44□□□□□ -0.26
USP42-205ENST00000465073 LINC00167Q96N53 147 aa13.44□□□□□ -0.26
USP42-205ENST00000465073 SCGB3A1Q96QR1 104 aa13.44□□□□□ -0.26
USP42-205ENST00000465073 A0A087X002 238 aa13.43□□□□□ -0.26
USP42-205ENST00000465073 TINCRA0A1B0GVN0 87 aa13.42□□□□□ -0.26
USP42-205ENST00000465073 RPL37AP8A6NKH3 93 aa13.42□□□□□ -0.26
USP42-205ENST00000465073 TYMSOSQ8TAI1 123 aa13.42□□□□□ -0.26
USP42-205ENST00000465073 COX7B2Q8TF08 81 aa13.42□□□□□ -0.26
USP42-205ENST00000465073 MUC2Q02817 5179 aa13.41□□□□□ -0.26
USP42-205ENST00000465073 IGLV5-45A0A087WSX0 123 aa13.41□□□□□ -0.26
USP42-205ENST00000465073 RAB14P61106 215 aa13.41□□□□□ -0.26
USP42-205ENST00000465073 KIAA1644Q3SXP7 199 aa13.41□□□□□ -0.26
USP42-205ENST00000465073 LINC01549A6NIU2 74 aa13.4□□□□□ -0.26
USP42-205ENST00000465073 A0A0U1RQV1 116 aa13.39□□□□□ -0.27
USP42-205ENST00000465073 ADCYAP1P18509 176 aa13.39□□□□□ -0.27
USP42-205ENST00000465073 IGLV5-37A0A075B6J1 123 aa13.38□□□□□ -0.27
USP42-205ENST00000465073 GAGE10A6NGK3 116 aa13.38□□□□□ -0.27
USP42-205ENST00000465073 CST9LQ9H4G1 147 aa13.37□□□□□ -0.27
USP42-205ENST00000465073 RAB5BP61020 215 aa13.36□□□□□ -0.27
USP42-205ENST00000465073 NKAPP1Q8N9T2 125 aa13.36□□□□□ -0.27
USP42-205ENST00000465073 TRAV9-1A0A075B6T8 112 aa13.36□□□□□ -0.27
USP42-205ENST00000465073 LINC01546A6NGU7 62 aa13.36□□□□□ -0.27
USP42-205ENST00000465073 SPINK8P0C7L1 97 aa13.35□□□□□ -0.27
USP42-205ENST00000465073 UBE2AP49459 152 aa13.35□□□□□ -0.27
USP42-205ENST00000465073 KRTAP13-1Q8IUC0 172 aa13.35□□□□□ -0.27
USP42-205ENST00000465073 MRPL18Q9H0U6 180 aaKnown RBP13.34□□□□□ -0.27
USP42-205ENST00000465073 ANAPC11Q9NYG5 84 aa13.34□□□□□ -0.27
USP42-205ENST00000465073 PMVKQ15126 192 aa13.33□□□□□ -0.28
USP42-205ENST00000465073 ATP5LO75964 103 aa13.31□□□□□ -0.28
USP42-205ENST00000465073 FAM229BQ4G0N7 80 aa13.31□□□□□ -0.28
USP42-205ENST00000465073 KRTAP13-2Q52LG2 175 aa13.31□□□□□ -0.28
USP42-205ENST00000465073 H3BRM9 83 aa13.3□□□□□ -0.28
USP42-205ENST00000465073 GNB1LQ9BYB4 327 aa13.3□□□□□ -0.28
USP42-205ENST00000465073 IGKV2-28A0A075B6P5 120 aa13.28□□□□□ -0.28
USP42-205ENST00000465073 IGKV2D-28P01615 120 aa13.28□□□□□ -0.28
USP42-205ENST00000465073 CLLU1Q5K131 121 aa13.27□□□□□ -0.29
USP42-205ENST00000465073 FA2HQ7L5A8 372 aa13.27□□□□□ -0.29
USP42-205ENST00000465073 S100PP25815 95 aa13.26□□□□□ -0.29
USP42-205ENST00000465073 LINC00304Q8N9R0 145 aa13.26□□□□□ -0.29
USP42-205ENST00000465073 SCO1O75880 301 aa13.25□□□□□ -0.29
USP42-205ENST00000465073 PFN2P35080 140 aa13.25□□□□□ -0.29
USP42-205ENST00000465073 SMCO4Q9NRQ5 59 aa13.25□□□□□ -0.29
USP42-205ENST00000465073 IGKV2D-26A0A0A0MRZ7 120 aa13.24□□□□□ -0.29
USP42-205ENST00000465073 IGLV5-39A0A0G2JS06 123 aa13.24□□□□□ -0.29
USP42-205ENST00000465073 TMEM218A2RU14 115 aa13.24□□□□□ -0.29
USP42-205ENST00000465073 UQCC3Q6UW78 93 aa13.24□□□□□ -0.29
USP42-205ENST00000465073 IGLC3P0DOY3 106 aa13.23□□□□□ -0.29
USP42-205ENST00000465073 COX19Q49B96 90 aa13.23□□□□□ -0.29
USP42-205ENST00000465073 VPREB1P12018 145 aa13.23□□□□□ -0.29
USP42-205ENST00000465073 CTAG1AP78358 180 aa13.22□□□□□ -0.29
USP42-205ENST00000465073 RETNLBQ9BQ08 111 aa13.22□□□□□ -0.29
USP42-205ENST00000465073 SND1-IT1Q9HBX3 110 aa13.22□□□□□ -0.29
USP42-205ENST00000465073 PRLHP81277 87 aa13.21□□□□□ -0.3
USP42-205ENST00000465073 RPL24P83731 157 aaKnown RBP13.21□□□□□ -0.3
USP42-205ENST00000465073 COX17Q14061 63 aa13.21□□□□□ -0.3
USP42-205ENST00000465073 FAM19A1Q7Z5A9 133 aa13.21□□□□□ -0.3
USP42-205ENST00000465073 TMEM126AQ9H061 195 aa13.21□□□□□ -0.3
USP42-205ENST00000465073 ERG28Q9UKR5 140 aa13.21□□□□□ -0.3
USP42-205ENST00000465073 FABP9Q0Z7S8 132 aa13.2□□□□□ -0.3
USP42-205ENST00000465073 NDUFA6P56556 154 aa13.19□□□□□ -0.3
USP42-205ENST00000465073 TMEM238C9JI98 176 aa13.18□□□□□ -0.3
USP42-205ENST00000465073 ZNF22P17026 224 aaPredicted RBP13.18□□□□□ -0.3
USP42-205ENST00000465073 SEC11CQ9BY50 192 aa13.17□□□□□ -0.3
USP42-205ENST00000465073 M0R378 163 aa13.16□□□□□ -0.3
USP42-205ENST00000465073 TPRXLQ17RH7 258 aa13.16□□□□□ -0.3
USP42-205ENST00000465073 CDIP1Q9H305 208 aa13.16□□□□□ -0.3
USP42-205ENST00000465073 PLEKHB2Q96CS7 222 aa13.16□□□□□ -0.3
USP42-205ENST00000465073 IGLV7-46A0A075B6I9 117 aa13.15□□□□□ -0.3
USP42-205ENST00000465073 SFTA2Q6UW10 78 aa13.15□□□□□ -0.3
USP42-205ENST00000465073 A0A096LNJ9 63 aa13.14□□□□□ -0.31
USP42-205ENST00000465073 LCE2AQ5TA79 106 aaPredicted RBP13.14□□□□□ -0.31
USP42-205ENST00000465073 ZNF625Q96I27 306 aaPredicted RBP13.14□□□□□ -0.31
USP42-205ENST00000465073 CBLN2Q8IUK8 224 aa13.13□□□□□ -0.31
USP42-205ENST00000465073 Q8NDZ9 215 aa13.12□□□□□ -0.31
USP42-205ENST00000465073 KRTAP9-2Q9BYQ4 174 aa13.12□□□□□ -0.31
USP42-205ENST00000465073 LINC00614P0C842 121 aa13.11□□□□□ -0.31
USP42-205ENST00000465073 FAT4Q6V0I7 4981 aa13.11□□□□□ -0.31
USP42-205ENST00000465073 HBDP02042 147 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms