RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 C9JQL5 133 aa10.1□□□□□ -0.79
HMGN1-210ENST00000464078 F8VRH5 84 aa10.09□□□□□ -0.79
HMGN1-210ENST00000464078 C2orf66Q6UXQ4 117 aa10.09□□□□□ -0.79
HMGN1-210ENST00000464078 ALKBH7Q9BT30 221 aaPredicted RBP10.09□□□□□ -0.79
HMGN1-210ENST00000464078 TPRXLQ17RH7 258 aa10.08□□□□□ -0.8
HMGN1-210ENST00000464078 ZC2HC1BQ5TFG8 222 aa10.08□□□□□ -0.8
HMGN1-210ENST00000464078 VCX2Q9H322 139 aa10.08□□□□□ -0.8
HMGN1-210ENST00000464078 FAM229BQ4G0N7 80 aa10.07□□□□□ -0.8
HMGN1-210ENST00000464078 KRTAP13-2Q52LG2 175 aa10.07□□□□□ -0.8
HMGN1-210ENST00000464078 KRTAP13-1Q8IUC0 172 aa10.07□□□□□ -0.8
HMGN1-210ENST00000464078 MAP1LC3AQ9H492 121 aa10.07□□□□□ -0.8
HMGN1-210ENST00000464078 IGIPA6NJ69 53 aa10.06□□□□□ -0.8
HMGN1-210ENST00000464078 CXCL5P42830 114 aa10.06□□□□□ -0.8
HMGN1-210ENST00000464078 HERVK_113P63121 156 aa10.06□□□□□ -0.8
HMGN1-210ENST00000464078 SEC11AP67812 179 aa10.06□□□□□ -0.8
HMGN1-210ENST00000464078 CDKN2A-AS1Q9UH64 79 aa10.06□□□□□ -0.8
HMGN1-210ENST00000464078 MUC17Q685J3 4493 aa10.06□□□□□ -0.8
HMGN1-210ENST00000464078 K7EMI3 77 aa10.05□□□□□ -0.8
HMGN1-210ENST00000464078 ORMDL2Q53FV1 153 aa10.05□□□□□ -0.8
HMGN1-210ENST00000464078 Q8N8P6 123 aa10.05□□□□□ -0.8
HMGN1-210ENST00000464078 LINC00167Q96N53 147 aa10.05□□□□□ -0.8
HMGN1-210ENST00000464078 RETNLBQ9BQ08 111 aa10.05□□□□□ -0.8
HMGN1-210ENST00000464078 LOC389332A0A1B0GUA5 103 aa10.04□□□□□ -0.8
HMGN1-210ENST00000464078 CTAG1AP78358 180 aa10.04□□□□□ -0.8
HMGN1-210ENST00000464078 SRSF3P84103 164 aaKnown RBP10.04□□□□□ -0.8
HMGN1-210ENST00000464078 LINC00304Q8N9R0 145 aa10.04□□□□□ -0.8
HMGN1-210ENST00000464078 IGLV5-37A0A075B6J1 123 aa10.03□□□□□ -0.8
HMGN1-210ENST00000464078 PEA15Q15121 130 aa10.03□□□□□ -0.8
HMGN1-210ENST00000464078 PAPPA-AS1Q5QFB9 102 aa10.03□□□□□ -0.8
HMGN1-210ENST00000464078 CDIP1Q9H305 208 aa10.03□□□□□ -0.8
HMGN1-210ENST00000464078 ANAPC11Q9NYG5 84 aa10.03□□□□□ -0.8
HMGN1-210ENST00000464078 RPL37AP8A6NKH3 93 aa10.02□□□□□ -0.81
HMGN1-210ENST00000464078 GEMIN7Q9H840 131 aaKnown RBP10.01□□□□□ -0.81
HMGN1-210ENST00000464078 TIMM17AQ99595 171 aa10□□□□□ -0.81
HMGN1-210ENST00000464078 IGLV7-46A0A075B6I9 117 aa9.99□□□□□ -0.81
HMGN1-210ENST00000464078 SMIM1B2RUZ4 78 aa9.99□□□□□ -0.81
HMGN1-210ENST00000464078 UBE2AP49459 152 aa9.99□□□□□ -0.81
HMGN1-210ENST00000464078 KRTAP3-3Q9BYR6 98 aa9.99□□□□□ -0.81
HMGN1-210ENST00000464078 KRTAP3-2Q9BYR7 98 aa9.99□□□□□ -0.81
HMGN1-210ENST00000464078 GAGE10A6NGK3 116 aa9.98□□□□□ -0.81
HMGN1-210ENST00000464078 PNRC1Q12796 327 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-210ENST00000464078 PDZD11Q5EBL8 140 aa9.98□□□□□ -0.81
HMGN1-210ENST00000464078 NXT2Q9NPJ8 142 aaKnown RBP9.98□□□□□ -0.81
HMGN1-210ENST00000464078 G0S2P27469 103 aa9.97□□□□□ -0.81
HMGN1-210ENST00000464078 NKAPP1Q8N9T2 125 aa9.97□□□□□ -0.81
HMGN1-210ENST00000464078 hCG_2014768A0A024R1R8 64 aa9.96□□□□□ -0.82
HMGN1-210ENST00000464078 IGLV5-45A0A087WSX0 123 aa9.96□□□□□ -0.82
HMGN1-210ENST00000464078 IGKV2D-26A0A0A0MRZ7 120 aa9.96□□□□□ -0.82
HMGN1-210ENST00000464078 COX7B2Q8TF08 81 aa9.96□□□□□ -0.82
HMGN1-210ENST00000464078 TOMM6Q96B49 74 aa9.95□□□□□ -0.82
HMGN1-210ENST00000464078 TINCRA0A1B0GVN0 87 aa9.93□□□□□ -0.82
HMGN1-210ENST00000464078 ERASQ7Z444 233 aa9.93□□□□□ -0.82
HMGN1-210ENST00000464078 IGKV2-28A0A075B6P5 120 aa9.92□□□□□ -0.82
HMGN1-210ENST00000464078 IGKV2D-28P01615 120 aa9.92□□□□□ -0.82
HMGN1-210ENST00000464078 PRLHP81277 87 aa9.91□□□□□ -0.82
HMGN1-210ENST00000464078 PPDPFQ9H3Y8 114 aa9.91□□□□□ -0.82
HMGN1-210ENST00000464078 TMEM126AQ9H061 195 aa9.9□□□□□ -0.82
HMGN1-210ENST00000464078 RAB5BP61020 215 aa9.89□□□□□ -0.83
HMGN1-210ENST00000464078 ANAPC16Q96DE5 110 aa9.89□□□□□ -0.83
HMGN1-210ENST00000464078 SCGB3A1Q96QR1 104 aa9.89□□□□□ -0.83
HMGN1-210ENST00000464078 LINC01549A6NIU2 74 aa9.88□□□□□ -0.83
HMGN1-210ENST00000464078 SCO1O75880 301 aa9.88□□□□□ -0.83
HMGN1-210ENST00000464078 MT-ND4LP03901 98 aa9.88□□□□□ -0.83
HMGN1-210ENST00000464078 ATP5LO75964 103 aa9.87□□□□□ -0.83
HMGN1-210ENST00000464078 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
HMGN1-210ENST00000464078 VPREB1P12018 145 aa9.87□□□□□ -0.83
HMGN1-210ENST00000464078 SPAG11AQ6PDA7 123 aa9.87□□□□□ -0.83
HMGN1-210ENST00000464078 FP248Q71RG6 208 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-210ENST00000464078 FAM19A1Q7Z5A9 133 aa9.87□□□□□ -0.83
HMGN1-210ENST00000464078 PLEKHB2Q96CS7 222 aa9.87□□□□□ -0.83
HMGN1-210ENST00000464078 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
HMGN1-210ENST00000464078 ADCYAP1P18509 176 aa9.86□□□□□ -0.83
HMGN1-210ENST00000464078 C3orf22Q8N5N4 141 aa9.86□□□□□ -0.83
HMGN1-210ENST00000464078 MRPL18Q9H0U6 180 aaKnown RBP9.86□□□□□ -0.83
HMGN1-210ENST00000464078 CST9LQ9H4G1 147 aa9.86□□□□□ -0.83
HMGN1-210ENST00000464078 M0R378 163 aa9.85□□□□□ -0.83
HMGN1-210ENST00000464078 GNB1LQ9BYB4 327 aa9.85□□□□□ -0.83
HMGN1-210ENST00000464078 LINC01546A6NGU7 62 aa9.84□□□□□ -0.83
HMGN1-210ENST00000464078 IGLV5-39A0A0G2JS06 123 aa9.83□□□□□ -0.84
HMGN1-210ENST00000464078 H3BRM9 83 aa9.83□□□□□ -0.84
HMGN1-210ENST00000464078 ASB16-AS1Q495Z4 193 aa9.83□□□□□ -0.84
HMGN1-210ENST00000464078 SND1-IT1Q9HBX3 110 aa9.83□□□□□ -0.84
HMGN1-210ENST00000464078 PFN2P35080 140 aa9.82□□□□□ -0.84
HMGN1-210ENST00000464078 RPL24P83731 157 aaKnown RBP9.82□□□□□ -0.84
HMGN1-210ENST00000464078 PMVKQ15126 192 aa9.82□□□□□ -0.84
HMGN1-210ENST00000464078 KRTAP13-3Q3SY46 172 aa9.82□□□□□ -0.84
HMGN1-210ENST00000464078 CBLN2Q8IUK8 224 aa9.82□□□□□ -0.84
HMGN1-210ENST00000464078 COX17Q14061 63 aa9.81□□□□□ -0.84
HMGN1-210ENST00000464078 SPRR4Q96PI1 79 aa9.8□□□□□ -0.84
HMGN1-210ENST00000464078 ERG28Q9UKR5 140 aa9.8□□□□□ -0.84
HMGN1-210ENST00000464078 LINC01547P58512 204 aaPredicted RBP9.79□□□□□ -0.84
HMGN1-210ENST00000464078 KIAA1644Q3SXP7 199 aa9.79□□□□□ -0.84
HMGN1-210ENST00000464078 HIGD2AQ9BW72 106 aa9.79□□□□□ -0.84
HMGN1-210ENST00000464078 IGLC3P0DOY3 106 aa9.78□□□□□ -0.84
HMGN1-210ENST00000464078 LINC00337Q8N6G1 96 aa9.78□□□□□ -0.84
HMGN1-210ENST00000464078 Q8NDZ9 215 aa9.78□□□□□ -0.84
HMGN1-210ENST00000464078 TRAV9-1A0A075B6T8 112 aa9.76□□□□□ -0.85
HMGN1-210ENST00000464078 ZNF706Q9Y5V0 76 aaPredicted RBP9.76□□□□□ -0.85
HMGN1-210ENST00000464078 RAB14P61106 215 aa9.75□□□□□ -0.85
HMGN1-210ENST00000464078 C4orf48Q5BLP8 95 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms