RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 D6R8Y8 96 aa1.55□□□□□ -2.16
ITGB1-208ENST00000464001 NCR3O14931 201 aa1.55□□□□□ -2.16
ITGB1-208ENST00000464001 LY6G6CO95867 125 aa1.55□□□□□ -2.16
ITGB1-208ENST00000464001 MGPP08493 103 aa1.55□□□□□ -2.16
ITGB1-208ENST00000464001 PLGLAQ15195 96 aa1.55□□□□□ -2.16
ITGB1-208ENST00000464001 MUSTN1Q8IVN3 82 aa1.55□□□□□ -2.16
ITGB1-208ENST00000464001 SPRR4Q96PI1 79 aa1.55□□□□□ -2.16
ITGB1-208ENST00000464001 FBN3Q75N90 2809 aa1.55□□□□□ -2.16
ITGB1-208ENST00000464001 DUOX2Q9NRD8 1548 aa1.55□□□□□ -2.16
ITGB1-208ENST00000464001 HMGN3Q15651 99 aa1.54□□□□□ -2.16
ITGB1-208ENST00000464001 C10orf99Q6UWK7 81 aa1.54□□□□□ -2.16
ITGB1-208ENST00000464001 DEFB107AQ8IZN7 70 aa1.54□□□□□ -2.16
ITGB1-208ENST00000464001 ABCA9Q8IUA7 1624 aa1.54□□□□□ -2.16
ITGB1-208ENST00000464001 XRN1Q8IZH2 1706 aaKnown RBP1.54□□□□□ -2.16
ITGB1-208ENST00000464001 EFCAB5A4FU69 1503 aa1.53□□□□□ -2.16
ITGB1-208ENST00000464001 CEBPZOSA8MTT3 80 aa1.53□□□□□ -2.16
ITGB1-208ENST00000464001 SMIM13P0DJ93 91 aa1.53□□□□□ -2.16
ITGB1-208ENST00000464001 C6orf201Q7Z4U5 140 aa1.53□□□□□ -2.16
ITGB1-208ENST00000464001 CFAP43Q8NDM7 1665 aa1.53□□□□□ -2.16
ITGB1-208ENST00000464001 C1orf167Q5SNV9 1468 aa1.52□□□□□ -2.17
ITGB1-208ENST00000464001 COX17Q14061 63 aa1.52□□□□□ -2.17
ITGB1-208ENST00000464001 DEFB121Q5J5C9 76 aa1.52□□□□□ -2.17
ITGB1-208ENST00000464001 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.52□□□□□ -2.17
ITGB1-208ENST00000464001 LINC00575Q6W349 94 aa1.52□□□□□ -2.17
ITGB1-208ENST00000464001 SMIM4Q8WVI0 70 aa1.52□□□□□ -2.17
ITGB1-208ENST00000464001 PLAC8Q9NZF1 115 aa1.52□□□□□ -2.17
ITGB1-208ENST00000464001 UBE2D4Q9Y2X8 147 aa1.52□□□□□ -2.17
ITGB1-208ENST00000464001 POLR1AO95602 1720 aaPredicted RBP1.52□□□□□ -2.17
ITGB1-208ENST00000464001 PREX1Q8TCU6 1659 aa1.51□□□□□ -2.17
ITGB1-208ENST00000464001 TECTAO75443 2155 aa1.51□□□□□ -2.17
ITGB1-208ENST00000464001 A0A096LNT2 108 aa1.51□□□□□ -2.17
ITGB1-208ENST00000464001 GVQW2A0A096LPI5 108 aaPredicted RBP1.51□□□□□ -2.17
ITGB1-208ENST00000464001 G3V318 75 aa1.51□□□□□ -2.17
ITGB1-208ENST00000464001 PRB1P04280 392 aa1.51□□□□□ -2.17
ITGB1-208ENST00000464001 SPINK7P58062 85 aa1.51□□□□□ -2.17
ITGB1-208ENST00000464001 UMAD1C9J7I0 102 aa1.5□□□□□ -2.17
ITGB1-208ENST00000464001 Q6JHZ5 121 aa1.5□□□□□ -2.17
ITGB1-208ENST00000464001 Q6ZRX8 168 aa1.5□□□□□ -2.17
ITGB1-208ENST00000464001 SMIM11BQ8TCY0 68 aa1.5□□□□□ -2.17
ITGB1-208ENST00000464001 PLAC4Q8WY50 150 aa1.5□□□□□ -2.17
ITGB1-208ENST00000464001 LINC00846Q9NV44 126 aa1.5□□□□□ -2.17
ITGB1-208ENST00000464001 CICQ96RK0 1608 aaPredicted RBP1.5□□□□□ -2.17
ITGB1-208ENST00000464001 FLG2Q5D862 2391 aaPredicted RBP1.5□□□□□ -2.17
ITGB1-208ENST00000464001 ASXL1Q8IXJ9 1541 aa1.5□□□□□ -2.17
ITGB1-208ENST00000464001 ATP7BP35670 1465 aa1.5□□□□□ -2.17
ITGB1-208ENST00000464001 HFM1A2PYH4 1435 aa1.49□□□□□ -2.17
ITGB1-208ENST00000464001 ZDBF2Q9HCK1 2354 aa1.49□□□□□ -2.17
ITGB1-208ENST00000464001 KIAA0556O60303 1618 aa1.49□□□□□ -2.17
ITGB1-208ENST00000464001 C10orf113Q5VZT2 155 aa1.49□□□□□ -2.17
ITGB1-208ENST00000464001 TIAM1Q13009 1591 aa1.49□□□□□ -2.17
ITGB1-208ENST00000464001 CDC42BPGQ6DT37 1551 aa1.48□□□□□ -2.17
ITGB1-208ENST00000464001 TSC2P49815 1807 aa1.48□□□□□ -2.17
ITGB1-208ENST00000464001 H0Y9P7 68 aa1.48□□□□□ -2.17
ITGB1-208ENST00000464001 RPL37P61927 97 aaKnown RBP1.48□□□□□ -2.17
ITGB1-208ENST00000464001 TMEM263Q8WUH6 116 aaKnown RBP1.48□□□□□ -2.17
ITGB1-208ENST00000464001 S100ZQ8WXG8 99 aa1.48□□□□□ -2.17
ITGB1-208ENST00000464001 LRP6O75581 1613 aa1.48□□□□□ -2.17
ITGB1-208ENST00000464001 KMT2BQ9UMN6 2715 aaPredicted RBP1.47□□□□□ -2.17
ITGB1-208ENST00000464001 QSER1Q2KHR3 1735 aa1.47□□□□□ -2.17
ITGB1-208ENST00000464001 NRAPQ86VF7 1730 aa1.47□□□□□ -2.17
ITGB1-208ENST00000464001 DOT1LQ8TEK3 1739 aa1.47□□□□□ -2.17
ITGB1-208ENST00000464001 TRBV7-4A0A0J9YYF1 115 aa1.47□□□□□ -2.17
ITGB1-208ENST00000464001 GCHFRP30047 84 aa1.47□□□□□ -2.17
ITGB1-208ENST00000464001 SPATA8Q6RVD6 105 aa1.47□□□□□ -2.17
ITGB1-208ENST00000464001 NKTRP30414 1462 aaKnown RBP1.47□□□□□ -2.17
ITGB1-208ENST00000464001 PAPPAQ13219 1627 aa1.47□□□□□ -2.17
ITGB1-208ENST00000464001 PREX2Q70Z35 1606 aa1.47□□□□□ -2.17
ITGB1-208ENST00000464001 KNTC1P50748 2209 aa1.46□□□□□ -2.18
ITGB1-208ENST00000464001 CD163L1Q9NR16 1453 aa1.46□□□□□ -2.18
ITGB1-208ENST00000464001 GNGT1P63211 74 aa1.46□□□□□ -2.18
ITGB1-208ENST00000464001 HAMPP81172 84 aa1.46□□□□□ -2.18
ITGB1-208ENST00000464001 SPINK13Q1W4C9 94 aa1.46□□□□□ -2.18
ITGB1-208ENST00000464001 HILPDAQ9Y5L2 63 aa1.46□□□□□ -2.18
ITGB1-208ENST00000464001 NESP48681 1621 aa1.46□□□□□ -2.18
ITGB1-208ENST00000464001 SAMD9Q5K651 1589 aa1.46□□□□□ -2.18
ITGB1-208ENST00000464001 RICTORQ6R327 1708 aa1.46□□□□□ -2.18
ITGB1-208ENST00000464001 URB2Q14146 1524 aaKnown RBP1.45□□□□□ -2.18
ITGB1-208ENST00000464001 J3QKU1 62 aa1.45□□□□□ -2.18
ITGB1-208ENST00000464001 S100A3P33764 101 aa1.45□□□□□ -2.18
ITGB1-208ENST00000464001 A0A0G2JMZ2 1700 aa1.45□□□□□ -2.18
ITGB1-208ENST00000464001 CNTRLQ7Z7A1 2325 aa1.45□□□□□ -2.18
ITGB1-208ENST00000464001 LRRC7Q96NW7 1537 aa1.45□□□□□ -2.18
ITGB1-208ENST00000464001 KIF1AQ12756 1690 aa1.45□□□□□ -2.18
ITGB1-208ENST00000464001 NHSQ6T4R5 1651 aa1.45□□□□□ -2.18
ITGB1-208ENST00000464001 LAMC1P11047 1609 aa1.44□□□□□ -2.18
ITGB1-208ENST00000464001 USP32Q8NFA0 1604 aa1.44□□□□□ -2.18
ITGB1-208ENST00000464001 EIF2AK4Q9P2K8 1649 aaKnown RBP1.44□□□□□ -2.18
ITGB1-208ENST00000464001 A0A087WXM4 84 aa1.44□□□□□ -2.18
ITGB1-208ENST00000464001 A0A1B0GUT8 65 aa1.44□□□□□ -2.18
ITGB1-208ENST00000464001 ASXL3Q9C0F0 2248 aa1.44□□□□□ -2.18
ITGB1-208ENST00000464001 MROH2AA6NES4 1674 aa1.43□□□□□ -2.18
ITGB1-208ENST00000464001 TRBV6-1A0A0K0K1D8 114 aa1.43□□□□□ -2.18
ITGB1-208ENST00000464001 LYNX1P0DP58 116 aa1.43□□□□□ -2.18
ITGB1-208ENST00000464001 IFI27P40305 119 aaPredicted RBP1.43□□□□□ -2.18
ITGB1-208ENST00000464001 ATP5EP2Q5VTU8 51 aa1.43□□□□□ -2.18
ITGB1-208ENST00000464001 LMTK2Q8IWU2 1503 aa1.43□□□□□ -2.18
ITGB1-208ENST00000464001 SORL1Q92673 2214 aa1.43□□□□□ -2.18
ITGB1-208ENST00000464001 ABCA6Q8N139 1617 aa1.42□□□□□ -2.18
ITGB1-208ENST00000464001 A0A087WWC5 75 aa1.42□□□□□ -2.18
ITGB1-208ENST00000464001 H3BVH4 76 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms