RNA–Protein interactions for RNA: ENST00000463880.1

ARF4-202, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-202ENST00000463880 HIST1H2BKO60814 126 aa13.19□□□□□ -0.3
ARF4-202ENST00000463880 HIST1H2BJP06899 126 aa13.19□□□□□ -0.3
ARF4-202ENST00000463880 HIST1H2BOP23527 126 aa13.19□□□□□ -0.3
ARF4-202ENST00000463880 HIST1H2BBP33778 126 aa13.19□□□□□ -0.3
ARF4-202ENST00000463880 HIST1H2BDP58876 126 aa13.19□□□□□ -0.3
ARF4-202ENST00000463880 CKS1BP61024 79 aa13.19□□□□□ -0.3
ARF4-202ENST00000463880 HIST1H2BCP62807 126 aa13.19□□□□□ -0.3
ARF4-202ENST00000463880 HIST2H2BEQ16778 126 aa13.19□□□□□ -0.3
ARF4-202ENST00000463880 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.19□□□□□ -0.3
ARF4-202ENST00000463880 HIST1H2BHQ93079 126 aa13.19□□□□□ -0.3
ARF4-202ENST00000463880 HIST1H2BNQ99877 126 aa13.19□□□□□ -0.3
ARF4-202ENST00000463880 HIST1H2BMQ99879 126 aa13.19□□□□□ -0.3
ARF4-202ENST00000463880 CHTOPQ9Y3Y2 248 aaKnown RBP13.19□□□□□ -0.3
ARF4-202ENST00000463880 H0Y8G0 127 aa13.18□□□□□ -0.3
ARF4-202ENST00000463880 H3BRM9 83 aa13.18□□□□□ -0.3
ARF4-202ENST00000463880 LEPROTL1O95214 131 aa13.18□□□□□ -0.3
ARF4-202ENST00000463880 FABP4P15090 132 aa13.18□□□□□ -0.3
ARF4-202ENST00000463880 RNF151Q2KHN1 245 aa13.18□□□□□ -0.3
ARF4-202ENST00000463880 Q8IZM0 81 aa13.18□□□□□ -0.3
ARF4-202ENST00000463880 ZNF22P17026 224 aaPredicted RBP13.17□□□□□ -0.3
ARF4-202ENST00000463880 STPG4Q8N801 248 aa13.17□□□□□ -0.3
ARF4-202ENST00000463880 C11orf86A6NJI1 115 aa13.16□□□□□ -0.3
ARF4-202ENST00000463880 PTTG1IPP53801 180 aa13.16□□□□□ -0.3
ARF4-202ENST00000463880 C9orf116Q5BN46 136 aaPredicted RBP13.15□□□□□ -0.3
ARF4-202ENST00000463880 TMEM170BQ5T4T1 132 aa13.15□□□□□ -0.3
ARF4-202ENST00000463880 COX7B2Q8TF08 81 aa13.15□□□□□ -0.3
ARF4-202ENST00000463880 LINC00474Q9P2X8 69 aa13.14□□□□□ -0.31
ARF4-202ENST00000463880 TRAV12-1A0A0B4J245 112 aa13.13□□□□□ -0.31
ARF4-202ENST00000463880 TRBV30A0A0K0K1B3 111 aa13.13□□□□□ -0.31
ARF4-202ENST00000463880 PLAC8Q9NZF1 115 aa13.13□□□□□ -0.31
ARF4-202ENST00000463880 GAGE2EQ4V326 116 aa13.12□□□□□ -0.31
ARF4-202ENST00000463880 GAGE2DQ9UEU5 116 aa13.12□□□□□ -0.31
ARF4-202ENST00000463880 HSPB8Q9UJY1 196 aa13.12□□□□□ -0.31
ARF4-202ENST00000463880 Q6ZRP5 223 aa13.11□□□□□ -0.31
ARF4-202ENST00000463880 ABCA13Q86UQ4 5058 aa13.11□□□□□ -0.31
ARF4-202ENST00000463880 F8VRH5 84 aa13.1□□□□□ -0.31
ARF4-202ENST00000463880 PLA2G1BP04054 148 aaKnown RBP13.1□□□□□ -0.31
ARF4-202ENST00000463880 CXCL5P42830 114 aa13.09□□□□□ -0.31
ARF4-202ENST00000463880 TLX1NBP0CAT3 122 aa13.08□□□□□ -0.32
ARF4-202ENST00000463880 IGLV5-39A0A0G2JS06 123 aa13.07□□□□□ -0.32
ARF4-202ENST00000463880 A0A1W2PNN7 141 aa13.07□□□□□ -0.32
ARF4-202ENST00000463880 RPL37AP61513 92 aaKnown RBP13.07□□□□□ -0.32
ARF4-202ENST00000463880 ODF1Q14990 250 aa13.07□□□□□ -0.32
ARF4-202ENST00000463880 NDUFC2-KCTD14E9PQ53 114 aa13.06□□□□□ -0.32
ARF4-202ENST00000463880 INAFM2P0DMQ5 153 aa13.06□□□□□ -0.32
ARF4-202ENST00000463880 PMCHL2Q9BQD1 86 aa13.06□□□□□ -0.32
ARF4-202ENST00000463880 MAP1LC3CQ9BXW4 147 aa13.05□□□□□ -0.32
ARF4-202ENST00000463880 VPS13BQ7Z7G8 4022 aa13.04□□□□□ -0.32
ARF4-202ENST00000463880 C7orf33Q8WU49 177 aa13.04□□□□□ -0.32
ARF4-202ENST00000463880 PCLOQ9Y6V0 5065 aa13.03□□□□□ -0.32
ARF4-202ENST00000463880 TMEM223A0PJW6 202 aa13.03□□□□□ -0.32
ARF4-202ENST00000463880 FAM168BA1KXE4 195 aa13.03□□□□□ -0.32
ARF4-202ENST00000463880 FAM19A5Q7Z5A7 132 aaPredicted RBP13.01□□□□□ -0.33
ARF4-202ENST00000463880 XAGE1AQ9HD64 81 aa13.01□□□□□ -0.33
ARF4-202ENST00000463880 COA6Q5JTJ3 125 aaKnown RBP13□□□□□ -0.33
ARF4-202ENST00000463880 C9orf129Q5T035 196 aaKnown RBP13□□□□□ -0.33
ARF4-202ENST00000463880 ZNF625Q96I27 306 aaPredicted RBP13□□□□□ -0.33
ARF4-202ENST00000463880 DPM2O94777 84 aa12.99□□□□□ -0.33
ARF4-202ENST00000463880 KRTAP10-4P60372 401 aaPredicted RBP12.99□□□□□ -0.33
ARF4-202ENST00000463880 PHF5AQ7RTV0 110 aaKnown RBP12.99□□□□□ -0.33
ARF4-202ENST00000463880 PFN2P35080 140 aa12.98□□□□□ -0.33
ARF4-202ENST00000463880 SYS1-DBNDD2H3BUS1 97 aa12.97□□□□□ -0.33
ARF4-202ENST00000463880 IGKCP01834 107 aa12.97□□□□□ -0.33
ARF4-202ENST00000463880 PLNP26678 52 aa12.97□□□□□ -0.33
ARF4-202ENST00000463880 KRTAP7-1Q8IUC3 87 aa12.95□□□□□ -0.34
ARF4-202ENST00000463880 ERG28Q9UKR5 140 aa12.94□□□□□ -0.34
ARF4-202ENST00000463880 FLG2Q5D862 2391 aaPredicted RBP12.92□□□□□ -0.34
ARF4-202ENST00000463880 M0QXV9 152 aa12.92□□□□□ -0.34
ARF4-202ENST00000463880 C3orf79P0CE67 100 aa12.92□□□□□ -0.34
ARF4-202ENST00000463880 HNRNPA3P51991 378 aaKnown RBP12.92□□□□□ -0.34
ARF4-202ENST00000463880 KRTDAPP60985 99 aa12.92□□□□□ -0.34
ARF4-202ENST00000463880 HERVK_113P61574 105 aa12.92□□□□□ -0.34
ARF4-202ENST00000463880 SERTAD4-AS1Q5TG53 156 aa12.92□□□□□ -0.34
ARF4-202ENST00000463880 A0A0U1RRA0 63 aa12.91□□□□□ -0.34
ARF4-202ENST00000463880 PET117Q6UWS5 81 aa12.91□□□□□ -0.34
ARF4-202ENST00000463880 SRRM2Q9UQ35 2752 aaKnown RBP12.9□□□□□ -0.34
ARF4-202ENST00000463880 PRR3P79522 188 aaKnown RBP12.9□□□□□ -0.34
ARF4-202ENST00000463880 SFTA2Q6UW10 78 aa12.9□□□□□ -0.34
ARF4-202ENST00000463880 LEPROTO15243 131 aa12.89□□□□□ -0.35
ARF4-202ENST00000463880 LINC00158P58513 81 aa12.89□□□□□ -0.35
ARF4-202ENST00000463880 TSPEAR-AS2P59090 65 aa12.89□□□□□ -0.35
ARF4-202ENST00000463880 LINC01545Q5VT33 79 aa12.89□□□□□ -0.35
ARF4-202ENST00000463880 NDUFA12Q9UI09 145 aa12.89□□□□□ -0.35
ARF4-202ENST00000463880 PLEKHB2Q96CS7 222 aa12.88□□□□□ -0.35
ARF4-202ENST00000463880 UBE2BP63146 152 aa12.87□□□□□ -0.35
ARF4-202ENST00000463880 MEIG1Q5JSS6 88 aa12.87□□□□□ -0.35
ARF4-202ENST00000463880 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
ARF4-202ENST00000463880 PKHD1L1Q86WI1 4243 aa12.86□□□□□ -0.35
ARF4-202ENST00000463880 J3QQQ9 107 aa12.86□□□□□ -0.35
ARF4-202ENST00000463880 S100A6P06703 90 aa12.86□□□□□ -0.35
ARF4-202ENST00000463880 COX17Q14061 63 aa12.86□□□□□ -0.35
ARF4-202ENST00000463880 KRTAP11-1Q8IUC1 163 aa12.86□□□□□ -0.35
ARF4-202ENST00000463880 SND1-IT1Q9HBX3 110 aa12.86□□□□□ -0.35
ARF4-202ENST00000463880 PSORS1C2Q9UIG4 136 aa12.86□□□□□ -0.35
ARF4-202ENST00000463880 MYMXA0A1B0GTQ4 84 aa12.85□□□□□ -0.35
ARF4-202ENST00000463880 SMIM13P0DJ93 91 aa12.85□□□□□ -0.35
ARF4-202ENST00000463880 LGALS3P17931 250 aaKnown RBP12.85□□□□□ -0.35
ARF4-202ENST00000463880 S100A2P29034 98 aa12.85□□□□□ -0.35
ARF4-202ENST00000463880 HERV-K104P63124 156 aa12.84□□□□□ -0.35
ARF4-202ENST00000463880 HIST3H2BBQ8N257 126 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms