RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 TOMM7Q9P0U1 55 aa11.8□□□□□ -0.52
COL9A3-203ENST00000462700 TRBV30A0A0K0K1B3 111 aa11.79□□□□□ -0.52
COL9A3-203ENST00000462700 A0A1W2PNN7 141 aa11.79□□□□□ -0.52
COL9A3-203ENST00000462700 PMCHL1Q16048 86 aa11.79□□□□□ -0.52
COL9A3-203ENST00000462700 IGLV5-45A0A087WSX0 123 aa11.78□□□□□ -0.52
COL9A3-203ENST00000462700 KRTAP29-1A8MX34 341 aaPredicted RBP11.78□□□□□ -0.52
COL9A3-203ENST00000462700 Q6ZRP5 223 aa11.78□□□□□ -0.52
COL9A3-203ENST00000462700 HERC1Q15751 4861 aa11.77□□□□□ -0.52
COL9A3-203ENST00000462700 CKS1BP61024 79 aa11.77□□□□□ -0.53
COL9A3-203ENST00000462700 C9orf116Q5BN46 136 aaPredicted RBP11.77□□□□□ -0.53
COL9A3-203ENST00000462700 PDZD11Q5EBL8 140 aa11.77□□□□□ -0.53
COL9A3-203ENST00000462700 C6orf226Q5I0X4 101 aa11.77□□□□□ -0.53
COL9A3-203ENST00000462700 SMIM1B2RUZ4 78 aa11.76□□□□□ -0.53
COL9A3-203ENST00000462700 FAT3Q8TDW7 4589 aa11.76□□□□□ -0.53
COL9A3-203ENST00000462700 J3QL48 77 aa11.75□□□□□ -0.53
COL9A3-203ENST00000462700 PRR3P79522 188 aaKnown RBP11.75□□□□□ -0.53
COL9A3-203ENST00000462700 LRP1Q07954 4544 aaKnown RBP11.75□□□□□ -0.53
COL9A3-203ENST00000462700 NDUFC2-KCTD14E9PQ53 114 aa11.74□□□□□ -0.53
COL9A3-203ENST00000462700 NDUFA6P56556 154 aa11.74□□□□□ -0.53
COL9A3-203ENST00000462700 GAGE2EQ4V326 116 aa11.74□□□□□ -0.53
COL9A3-203ENST00000462700 CHCHD1Q96BP2 118 aaKnown RBP11.74□□□□□ -0.53
COL9A3-203ENST00000462700 GAGE2DQ9UEU5 116 aa11.74□□□□□ -0.53
COL9A3-203ENST00000462700 ATP5LO75964 103 aa11.73□□□□□ -0.53
COL9A3-203ENST00000462700 IGLC3P0DOY3 106 aa11.73□□□□□ -0.53
COL9A3-203ENST00000462700 F8VRH5 84 aa11.72□□□□□ -0.53
COL9A3-203ENST00000462700 OXTP01178 125 aa11.72□□□□□ -0.53
COL9A3-203ENST00000462700 TRGC2P03986 189 aa11.72□□□□□ -0.53
COL9A3-203ENST00000462700 SPINK8P0C7L1 97 aa11.72□□□□□ -0.53
COL9A3-203ENST00000462700 CXCL5P42830 114 aa11.72□□□□□ -0.53
COL9A3-203ENST00000462700 FAM168BA1KXE4 195 aa11.71□□□□□ -0.53
COL9A3-203ENST00000462700 COX7B2Q8TF08 81 aa11.71□□□□□ -0.53
COL9A3-203ENST00000462700 H3BRM9 83 aa11.7□□□□□ -0.54
COL9A3-203ENST00000462700 PHF5AQ7RTV0 110 aaKnown RBP11.7□□□□□ -0.54
COL9A3-203ENST00000462700 DMBT1Q9UGM3 2413 aaPredicted RBP11.69□□□□□ -0.54
COL9A3-203ENST00000462700 ZNF22P17026 224 aaPredicted RBP11.68□□□□□ -0.54
COL9A3-203ENST00000462700 C9orf129Q5T035 196 aaKnown RBP11.68□□□□□ -0.54
COL9A3-203ENST00000462700 FAM19A5Q7Z5A7 132 aaPredicted RBP11.68□□□□□ -0.54
COL9A3-203ENST00000462700 BAGE3Q86Y29 109 aa11.68□□□□□ -0.54
COL9A3-203ENST00000462700 COLCA2A8K830 154 aa11.67□□□□□ -0.54
COL9A3-203ENST00000462700 KRTAP7-1Q8IUC3 87 aa11.67□□□□□ -0.54
COL9A3-203ENST00000462700 HSBP1O75506 76 aa11.66□□□□□ -0.54
COL9A3-203ENST00000462700 IGLV5-39A0A0G2JS06 123 aa11.65□□□□□ -0.54
COL9A3-203ENST00000462700 C11orf86A6NJI1 115 aa11.65□□□□□ -0.54
COL9A3-203ENST00000462700 IFI27L1Q96BM0 104 aa11.65□□□□□ -0.54
COL9A3-203ENST00000462700 FAM19A2Q8N3H0 131 aa11.64□□□□□ -0.55
COL9A3-203ENST00000462700 PSORS1C2Q9UIG4 136 aa11.64□□□□□ -0.55
COL9A3-203ENST00000462700 TRAV12-1A0A0B4J245 112 aa11.63□□□□□ -0.55
COL9A3-203ENST00000462700 M0QXV9 152 aa11.63□□□□□ -0.55
COL9A3-203ENST00000462700 CHTOPQ9Y3Y2 248 aaKnown RBP11.63□□□□□ -0.55
COL9A3-203ENST00000462700 LINC00310P59036 64 aa11.62□□□□□ -0.55
COL9A3-203ENST00000462700 TMEM170BQ5T4T1 132 aa11.62□□□□□ -0.55
COL9A3-203ENST00000462700 XAGE1AQ9HD64 81 aa11.62□□□□□ -0.55
COL9A3-203ENST00000462700 SERF1AO75920 110 aa11.61□□□□□ -0.55
COL9A3-203ENST00000462700 SPINK6Q6UWN8 80 aa11.61□□□□□ -0.55
COL9A3-203ENST00000462700 SRSF9Q13242 221 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL9A3-203ENST00000462700 SERTAD4-AS1Q5TG53 156 aa11.6□□□□□ -0.55
COL9A3-203ENST00000462700 KRTAP11-1Q8IUC1 163 aa11.6□□□□□ -0.55
COL9A3-203ENST00000462700 SCO1O75880 301 aa11.59□□□□□ -0.55
COL9A3-203ENST00000462700 C1orf137Q5JT78 98 aa11.59□□□□□ -0.55
COL9A3-203ENST00000462700 UBE2BP63146 152 aa11.57□□□□□ -0.56
COL9A3-203ENST00000462700 NUPR1O60356 82 aa11.56□□□□□ -0.56
COL9A3-203ENST00000462700 LEPROTL1O95214 131 aa11.56□□□□□ -0.56
COL9A3-203ENST00000462700 MT1HL1P0DM35 61 aa11.56□□□□□ -0.56
COL9A3-203ENST00000462700 C22orf24Q9Y442 160 aa11.56□□□□□ -0.56
COL9A3-203ENST00000462700 TMEM223A0PJW6 202 aa11.55□□□□□ -0.56
COL9A3-203ENST00000462700 ODF1Q14990 250 aa11.54□□□□□ -0.56
COL9A3-203ENST00000462700 H0Y8G0 127 aa11.53□□□□□ -0.56
COL9A3-203ENST00000462700 IGLV7-43P04211 117 aa11.53□□□□□ -0.56
COL9A3-203ENST00000462700 PFN2P35080 140 aa11.53□□□□□ -0.56
COL9A3-203ENST00000462700 SFTA2Q6UW10 78 aa11.53□□□□□ -0.56
COL9A3-203ENST00000462700 REG3GQ6UW15 175 aa11.53□□□□□ -0.56
COL9A3-203ENST00000462700 ERG28Q9UKR5 140 aa11.53□□□□□ -0.56
COL9A3-203ENST00000462700 LBHQ53QV2 105 aaPredicted RBP11.52□□□□□ -0.57
COL9A3-203ENST00000462700 ZNF625Q96I27 306 aaPredicted RBP11.52□□□□□ -0.57
COL9A3-203ENST00000462700 LINC01600Q96MT4 127 aa11.52□□□□□ -0.57
COL9A3-203ENST00000462700 TP73-AS1Q9UF72 201 aa11.52□□□□□ -0.57
COL9A3-203ENST00000462700 HSPB8Q9UJY1 196 aa11.52□□□□□ -0.57
COL9A3-203ENST00000462700 PLA2G2DQ9UNK4 145 aa11.52□□□□□ -0.57
COL9A3-203ENST00000462700 MRPL55Q7Z7F7 128 aaKnown RBP11.51□□□□□ -0.57
COL9A3-203ENST00000462700 FABP4P15090 132 aa11.5□□□□□ -0.57
COL9A3-203ENST00000462700 COX17Q14061 63 aa11.5□□□□□ -0.57
COL9A3-203ENST00000462700 HIST1H2BKO60814 126 aa11.49□□□□□ -0.57
COL9A3-203ENST00000462700 HIST1H2BJP06899 126 aa11.49□□□□□ -0.57
COL9A3-203ENST00000462700 HIST1H2BOP23527 126 aa11.49□□□□□ -0.57
COL9A3-203ENST00000462700 HIST1H2BBP33778 126 aa11.49□□□□□ -0.57
COL9A3-203ENST00000462700 HIST1H2BDP58876 126 aa11.49□□□□□ -0.57
COL9A3-203ENST00000462700 HIST1H2BCP62807 126 aa11.49□□□□□ -0.57
COL9A3-203ENST00000462700 HIST2H2BEQ16778 126 aa11.49□□□□□ -0.57
COL9A3-203ENST00000462700 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.49□□□□□ -0.57
COL9A3-203ENST00000462700 HIST1H2BHQ93079 126 aa11.49□□□□□ -0.57
COL9A3-203ENST00000462700 HIST1H2BNQ99877 126 aa11.49□□□□□ -0.57
COL9A3-203ENST00000462700 HIST1H2BMQ99879 126 aa11.49□□□□□ -0.57
COL9A3-203ENST00000462700 IGLV5-37A0A075B6J1 123 aa11.48□□□□□ -0.57
COL9A3-203ENST00000462700 TNXBP22105 4242 aa11.47□□□□□ -0.57
COL9A3-203ENST00000462700 SND1-IT1Q9HBX3 110 aa11.47□□□□□ -0.57
COL9A3-203ENST00000462700 DIRC1Q969H9 104 aa11.46□□□□□ -0.57
COL9A3-203ENST00000462700 LINC00167Q96N53 147 aa11.46□□□□□ -0.57
COL9A3-203ENST00000462700 PLNP26678 52 aa11.45□□□□□ -0.58
COL9A3-203ENST00000462700 NKAPP1Q8N9T2 125 aa11.45□□□□□ -0.58
COL9A3-203ENST00000462700 H0Y9J4 135 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms