RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 COPS9Q8WXC6 57 aa5.44□□□□□ -1.54
USP4-207ENST00000462673 PYGO1Q9Y3Y4 419 aa5.44□□□□□ -1.54
USP4-207ENST00000462673 TEX49A0A1B0GTD5 131 aa5.43□□□□□ -1.54
USP4-207ENST00000462673 H7C423 109 aa5.43□□□□□ -1.54
USP4-207ENST00000462673 M0QY20 66 aa5.43□□□□□ -1.54
USP4-207ENST00000462673 MRPS36P82909 103 aaKnown RBP5.43□□□□□ -1.54
USP4-207ENST00000462673 LITAFQ99732 161 aa5.43□□□□□ -1.54
USP4-207ENST00000462673 IMUPQ9GZP8 106 aa5.43□□□□□ -1.54
USP4-207ENST00000462673 NDUFA12Q9UI09 145 aa5.43□□□□□ -1.54
USP4-207ENST00000462673 IGHV3-64A0A075B6Q5 118 aa5.42□□□□□ -1.54
USP4-207ENST00000462673 IGHV1-58A0A0C4DH39 117 aa5.42□□□□□ -1.54
USP4-207ENST00000462673 A0A0J9YXV3 536 aa5.42□□□□□ -1.54
USP4-207ENST00000462673 TRBV10-1A0A0K0K1A3 114 aa5.42□□□□□ -1.54
USP4-207ENST00000462673 TINCRA0A1B0GVN0 87 aa5.42□□□□□ -1.54
USP4-207ENST00000462673 SMIM20Q8N5G0 67 aa5.42□□□□□ -1.54
USP4-207ENST00000462673 LCE6AA0A183 80 aa5.41□□□□□ -1.54
USP4-207ENST00000462673 RPL36AP83881 106 aaKnown RBP5.41□□□□□ -1.54
USP4-207ENST00000462673 MEIG1Q5JSS6 88 aa5.41□□□□□ -1.54
USP4-207ENST00000462673 RPL36ALQ969Q0 106 aaKnown RBP5.41□□□□□ -1.54
USP4-207ENST00000462673 JPT2Q9H910 190 aa5.41□□□□□ -1.54
USP4-207ENST00000462673 TENM3Q9P273 2699 aa5.41□□□□□ -1.54
USP4-207ENST00000462673 STAB2Q8WWQ8 2551 aa5.4□□□□□ -1.54
USP4-207ENST00000462673 IGHV3-73A0A0B4J1V6 119 aa5.4□□□□□ -1.54
USP4-207ENST00000462673 K7EQD1 137 aa5.4□□□□□ -1.54
USP4-207ENST00000462673 NDUFA1O15239 70 aa5.4□□□□□ -1.54
USP4-207ENST00000462673 GYPEP15421 78 aa5.4□□□□□ -1.54
USP4-207ENST00000462673 HERV-K104P63124 156 aa5.4□□□□□ -1.54
USP4-207ENST00000462673 LINC00476Q8WZB0 136 aa5.4□□□□□ -1.54
USP4-207ENST00000462673 VSIG2Q96IQ7 327 aa5.4□□□□□ -1.54
USP4-207ENST00000462673 DNAJC30Q96LL9 226 aa5.4□□□□□ -1.54
USP4-207ENST00000462673 TNFRSF18Q9Y5U5 241 aa5.4□□□□□ -1.54
USP4-207ENST00000462673 A0A096LPF7 62 aa5.39□□□□□ -1.55
USP4-207ENST00000462673 FAM236AA0A1B0GUQ0 79 aa5.39□□□□□ -1.55
USP4-207ENST00000462673 FAM236BA0A1B0GV22 79 aa5.39□□□□□ -1.55
USP4-207ENST00000462673 COX7A2LO14548 114 aa5.39□□□□□ -1.55
USP4-207ENST00000462673 INAFM2P0DMQ5 153 aa5.39□□□□□ -1.55
USP4-207ENST00000462673 CIRBPQ14011 172 aaKnown RBP5.39□□□□□ -1.55
USP4-207ENST00000462673 LINC00643Q86TS7 51 aa5.39□□□□□ -1.55
USP4-207ENST00000462673 CLEC2BQ92478 149 aa5.39□□□□□ -1.55
USP4-207ENST00000462673 OPRPNQ99935 248 aaPredicted RBP5.39□□□□□ -1.55
USP4-207ENST00000462673 PRSS2P07478 247 aa5.38□□□□□ -1.55
USP4-207ENST00000462673 CXCL5P42830 114 aa5.38□□□□□ -1.55
USP4-207ENST00000462673 TIRAPP58753 221 aa5.38□□□□□ -1.55
USP4-207ENST00000462673 C9orf153Q5TBE3 101 aa5.38□□□□□ -1.55
USP4-207ENST00000462673 LYPD5Q6UWN5 251 aa5.38□□□□□ -1.55
USP4-207ENST00000462673 DAZ4Q86SG3 579 aaKnown RBP5.38□□□□□ -1.55
USP4-207ENST00000462673 PPDPFQ9H3Y8 114 aa5.38□□□□□ -1.55
USP4-207ENST00000462673 Q9H8V8 135 aa5.38□□□□□ -1.55
USP4-207ENST00000462673 DAZ3Q9NR90 486 aaKnown RBP5.38□□□□□ -1.55
USP4-207ENST00000462673 TRAV8-3A0A0A6YYJ7 113 aa5.37□□□□□ -1.55
USP4-207ENST00000462673 TRACP01848 142 aa5.37□□□□□ -1.55
USP4-207ENST00000462673 ESRGQ1W209 222 aa5.37□□□□□ -1.55
USP4-207ENST00000462673 DAND5Q8N907 189 aa5.37□□□□□ -1.55
USP4-207ENST00000462673 DEFB104AQ8WTQ1 72 aa5.37□□□□□ -1.55
USP4-207ENST00000462673 UPK3BQ9BT76 320 aa5.37□□□□□ -1.55
USP4-207ENST00000462673 IGLV5-45A0A087WSX0 123 aa5.36□□□□□ -1.55
USP4-207ENST00000462673 UQCRQO14949 82 aa5.36□□□□□ -1.55
USP4-207ENST00000462673 C4orf48Q5BLP8 95 aa5.36□□□□□ -1.55
USP4-207ENST00000462673 C3orf22Q8N5N4 141 aa5.36□□□□□ -1.55
USP4-207ENST00000462673 UBE2D4Q9Y2X8 147 aa5.36□□□□□ -1.55
USP4-207ENST00000462673 LINC00588Q9Y4M8 146 aa5.36□□□□□ -1.55
USP4-207ENST00000462673 J3KT08 172 aa5.35□□□□□ -1.55
USP4-207ENST00000462673 ATOX1O00244 68 aa5.35□□□□□ -1.55
USP4-207ENST00000462673 NPC2P61916 151 aa5.35□□□□□ -1.55
USP4-207ENST00000462673 HERVK_113P63121 156 aa5.35□□□□□ -1.55
USP4-207ENST00000462673 ADAMTSL4-AS1Q5T5F5 129 aa5.35□□□□□ -1.55
USP4-207ENST00000462673 LELP1Q5T871 98 aa5.35□□□□□ -1.55
USP4-207ENST00000462673 SDIM1Q6ZPB5 146 aa5.35□□□□□ -1.55
USP4-207ENST00000462673 CHCHD5Q9BSY4 110 aa5.35□□□□□ -1.55
USP4-207ENST00000462673 IGHV3-38A0A0C4DH36 116 aa5.34□□□□□ -1.55
USP4-207ENST00000462673 A0A1B0GX51 115 aa5.34□□□□□ -1.55
USP4-207ENST00000462673 LINC00308Q8TCZ7 52 aa5.34□□□□□ -1.55
USP4-207ENST00000462673 LINC00526Q96FQ7 95 aa5.34□□□□□ -1.55
USP4-207ENST00000462673 CHCHD7Q9BUK0 85 aa5.34□□□□□ -1.55
USP4-207ENST00000462673 IGLV5-39A0A0G2JS06 123 aa5.33□□□□□ -1.56
USP4-207ENST00000462673 CRPP02741 224 aa5.33□□□□□ -1.56
USP4-207ENST00000462673 RNASE13Q5GAN3 156 aaKnown RBP5.33□□□□□ -1.56
USP4-207ENST00000462673 Q6ZSN1 163 aa5.33□□□□□ -1.56
USP4-207ENST00000462673 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.32□□□□□ -1.56
USP4-207ENST00000462673 TRBV6-8A0A0A6YYG3 113 aa5.32□□□□□ -1.56
USP4-207ENST00000462673 LOC100131303A0A0U1RQF7 123 aa5.32□□□□□ -1.56
USP4-207ENST00000462673 NBDYA0A0U1RRE5 68 aa5.32□□□□□ -1.56
USP4-207ENST00000462673 IGKV2-29A2NJV5 120 aaPredicted RBP5.32□□□□□ -1.56
USP4-207ENST00000462673 DNAL4O96015 105 aa5.32□□□□□ -1.56
USP4-207ENST00000462673 COX7CP15954 63 aa5.32□□□□□ -1.56
USP4-207ENST00000462673 C1orf134Q5TEV5 83 aa5.32□□□□□ -1.56
USP4-207ENST00000462673 FAM19A3Q7Z5A8 133 aa5.32□□□□□ -1.56
USP4-207ENST00000462673 FAM104AQ969W3 186 aa5.32□□□□□ -1.56
USP4-207ENST00000462673 CDKN2A-AS1Q9UH64 79 aa5.32□□□□□ -1.56
USP4-207ENST00000462673 TRAV13-2A0A0B4J235 113 aa5.31□□□□□ -1.56
USP4-207ENST00000462673 UBE2L6O14933 153 aa5.31□□□□□ -1.56
USP4-207ENST00000462673 DNAH10OSP0CZ25 163 aa5.31□□□□□ -1.56
USP4-207ENST00000462673 LINC01556Q5JQF7 62 aa5.31□□□□□ -1.56
USP4-207ENST00000462673 DGAT2L7PQ6IED9 249 aa5.31□□□□□ -1.56
USP4-207ENST00000462673 Q6JHZ5 121 aa5.31□□□□□ -1.56
USP4-207ENST00000462673 LINC00336Q6ZUF6 198 aa5.31□□□□□ -1.56
USP4-207ENST00000462673 C5orf38Q86SI9 138 aa5.31□□□□□ -1.56
USP4-207ENST00000462673 SMCR5Q8TEV8 140 aa5.31□□□□□ -1.56
USP4-207ENST00000462673 TENM2Q9NT68 2774 aa5.31□□□□□ -1.56
USP4-207ENST00000462673 M0R2N4 97 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms