RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 TOMM7Q9P0U1 55 aa9.96□□□□□ -0.82
ERCC3-206ENST00000462306 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
ERCC3-206ENST00000462306 PRSS2P07478 247 aa9.95□□□□□ -0.82
ERCC3-206ENST00000462306 IGLC3P0DOY3 106 aa9.95□□□□□ -0.82
ERCC3-206ENST00000462306 C6orf226Q5I0X4 101 aa9.95□□□□□ -0.82
ERCC3-206ENST00000462306 A0A1W2PNN7 141 aa9.94□□□□□ -0.82
ERCC3-206ENST00000462306 SCO1O75880 301 aa9.94□□□□□ -0.82
ERCC3-206ENST00000462306 NDUFA6P56556 154 aa9.94□□□□□ -0.82
ERCC3-206ENST00000462306 Q6ZRP5 223 aa9.94□□□□□ -0.82
ERCC3-206ENST00000462306 BAGE3Q86Y29 109 aa9.94□□□□□ -0.82
ERCC3-206ENST00000462306 MYCBP2O75592 4640 aa9.92□□□□□ -0.82
ERCC3-206ENST00000462306 LINC00310P59036 64 aa9.92□□□□□ -0.82
ERCC3-206ENST00000462306 CKS1BP61024 79 aa9.92□□□□□ -0.82
ERCC3-206ENST00000462306 C9orf116Q5BN46 136 aaPredicted RBP9.92□□□□□ -0.82
ERCC3-206ENST00000462306 C7orf33Q8WU49 177 aa9.92□□□□□ -0.82
ERCC3-206ENST00000462306 HSBP1O75506 76 aa9.91□□□□□ -0.82
ERCC3-206ENST00000462306 SPINK8P0C7L1 97 aa9.91□□□□□ -0.82
ERCC3-206ENST00000462306 ZNF22P17026 224 aaPredicted RBP9.91□□□□□ -0.82
ERCC3-206ENST00000462306 HNRNPA3P51991 378 aaKnown RBP9.91□□□□□ -0.82
ERCC3-206ENST00000462306 FAM19A2Q8N3H0 131 aa9.91□□□□□ -0.82
ERCC3-206ENST00000462306 NDUFC2-KCTD14E9PQ53 114 aa9.9□□□□□ -0.82
ERCC3-206ENST00000462306 H3BRM9 83 aa9.9□□□□□ -0.82
ERCC3-206ENST00000462306 SERF1AO75920 110 aa9.9□□□□□ -0.82
ERCC3-206ENST00000462306 COX7B2Q8TF08 81 aa9.9□□□□□ -0.82
ERCC3-206ENST00000462306 IFI27L1Q96BM0 104 aa9.9□□□□□ -0.82
ERCC3-206ENST00000462306 F8VRH5 84 aa9.89□□□□□ -0.83
ERCC3-206ENST00000462306 CXCL5P42830 114 aa9.89□□□□□ -0.83
ERCC3-206ENST00000462306 GAGE2EQ4V326 116 aa9.89□□□□□ -0.83
ERCC3-206ENST00000462306 GAGE2DQ9UEU5 116 aa9.89□□□□□ -0.83
ERCC3-206ENST00000462306 TRAV12-1A0A0B4J245 112 aa9.88□□□□□ -0.83
ERCC3-206ENST00000462306 IGLV5-39A0A0G2JS06 123 aa9.88□□□□□ -0.83
ERCC3-206ENST00000462306 C11orf86A6NJI1 115 aa9.88□□□□□ -0.83
ERCC3-206ENST00000462306 NUPR1O60356 82 aa9.88□□□□□ -0.83
ERCC3-206ENST00000462306 PKHD1L1Q86WI1 4243 aa9.87□□□□□ -0.83
ERCC3-206ENST00000462306 FAM168BA1KXE4 195 aa9.87□□□□□ -0.83
ERCC3-206ENST00000462306 CHTOPQ9Y3Y2 248 aaKnown RBP9.87□□□□□ -0.83
ERCC3-206ENST00000462306 PRR3P79522 188 aaKnown RBP9.86□□□□□ -0.83
ERCC3-206ENST00000462306 C9orf129Q5T035 196 aaKnown RBP9.86□□□□□ -0.83
ERCC3-206ENST00000462306 KRTAP7-1Q8IUC3 87 aa9.86□□□□□ -0.83
ERCC3-206ENST00000462306 TMEM170BQ5T4T1 132 aa9.84□□□□□ -0.83
ERCC3-206ENST00000462306 PHF5AQ7RTV0 110 aaKnown RBP9.84□□□□□ -0.83
ERCC3-206ENST00000462306 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
ERCC3-206ENST00000462306 KRTAP29-1A8MX34 341 aaPredicted RBP9.83□□□□□ -0.84
ERCC3-206ENST00000462306 LEPROTL1O95214 131 aa9.83□□□□□ -0.84
ERCC3-206ENST00000462306 FAM19A5Q7Z5A7 132 aaPredicted RBP9.83□□□□□ -0.84
ERCC3-206ENST00000462306 HIST1H2BKO60814 126 aa9.82□□□□□ -0.84
ERCC3-206ENST00000462306 HIST1H2BJP06899 126 aa9.82□□□□□ -0.84
ERCC3-206ENST00000462306 HIST1H2BOP23527 126 aa9.82□□□□□ -0.84
ERCC3-206ENST00000462306 HIST1H2BBP33778 126 aa9.82□□□□□ -0.84
ERCC3-206ENST00000462306 HIST1H2BDP58876 126 aa9.82□□□□□ -0.84
ERCC3-206ENST00000462306 HIST1H2BCP62807 126 aa9.82□□□□□ -0.84
ERCC3-206ENST00000462306 HIST2H2BEQ16778 126 aa9.82□□□□□ -0.84
ERCC3-206ENST00000462306 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.82□□□□□ -0.84
ERCC3-206ENST00000462306 HIST1H2BHQ93079 126 aa9.82□□□□□ -0.84
ERCC3-206ENST00000462306 HIST1H2BNQ99877 126 aa9.82□□□□□ -0.84
ERCC3-206ENST00000462306 HIST1H2BMQ99879 126 aa9.82□□□□□ -0.84
ERCC3-206ENST00000462306 ODF1Q14990 250 aa9.81□□□□□ -0.84
ERCC3-206ENST00000462306 XAGE1AQ9HD64 81 aa9.81□□□□□ -0.84
ERCC3-206ENST00000462306 LRP1Q07954 4544 aaKnown RBP9.81□□□□□ -0.84
ERCC3-206ENST00000462306 TMEM223A0PJW6 202 aa9.8□□□□□ -0.84
ERCC3-206ENST00000462306 FABP4P15090 132 aa9.8□□□□□ -0.84
ERCC3-206ENST00000462306 KRTAP11-1Q8IUC1 163 aa9.79□□□□□ -0.84
ERCC3-206ENST00000462306 PSORS1C2Q9UIG4 136 aa9.79□□□□□ -0.84
ERCC3-206ENST00000462306 HSPB8Q9UJY1 196 aa9.79□□□□□ -0.84
ERCC3-206ENST00000462306 H0Y8G0 127 aa9.78□□□□□ -0.84
ERCC3-206ENST00000462306 M0QXV9 152 aa9.78□□□□□ -0.84
ERCC3-206ENST00000462306 OXTP01178 125 aa9.78□□□□□ -0.84
ERCC3-206ENST00000462306 SERTAD4-AS1Q5TG53 156 aa9.78□□□□□ -0.84
ERCC3-206ENST00000462306 FAT3Q8TDW7 4589 aa9.78□□□□□ -0.84
ERCC3-206ENST00000462306 SRSF9Q13242 221 aaKnown RBP eCLIP9.77□□□□□ -0.85
ERCC3-206ENST00000462306 ZNF625Q96I27 306 aaPredicted RBP9.77□□□□□ -0.85
ERCC3-206ENST00000462306 J3QL48 77 aa9.76□□□□□ -0.85
ERCC3-206ENST00000462306 HERC1Q15751 4861 aa9.75□□□□□ -0.85
ERCC3-206ENST00000462306 ERG28Q9UKR5 140 aa9.75□□□□□ -0.85
ERCC3-206ENST00000462306 PFN2P35080 140 aa9.74□□□□□ -0.85
ERCC3-206ENST00000462306 SFTA2Q6UW10 78 aa9.74□□□□□ -0.85
ERCC3-206ENST00000462306 C22orf24Q9Y442 160 aa9.74□□□□□ -0.85
ERCC3-206ENST00000462306 S100A1P23297 94 aa9.73□□□□□ -0.85
ERCC3-206ENST00000462306 COX17Q14061 63 aa9.73□□□□□ -0.85
ERCC3-206ENST00000462306 C1orf137Q5JT78 98 aa9.73□□□□□ -0.85
ERCC3-206ENST00000462306 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
ERCC3-206ENST00000462306 PLA2G2DQ9UNK4 145 aa9.73□□□□□ -0.85
ERCC3-206ENST00000462306 PLNP26678 52 aa9.72□□□□□ -0.85
ERCC3-206ENST00000462306 UBE2BP63146 152 aa9.72□□□□□ -0.85
ERCC3-206ENST00000462306 COA6Q5JTJ3 125 aaKnown RBP9.72□□□□□ -0.85
ERCC3-206ENST00000462306 PMCHL2Q9BQD1 86 aa9.72□□□□□ -0.85
ERCC3-206ENST00000462306 MAP1LC3CQ9BXW4 147 aa9.72□□□□□ -0.85
ERCC3-206ENST00000462306 TP73-AS1Q9UF72 201 aa9.72□□□□□ -0.85
ERCC3-206ENST00000462306 ATP6V1G1O75348 118 aa9.71□□□□□ -0.86
ERCC3-206ENST00000462306 DPM2O94777 84 aa9.71□□□□□ -0.86
ERCC3-206ENST00000462306 LBHQ53QV2 105 aaPredicted RBP9.7□□□□□ -0.86
ERCC3-206ENST00000462306 SND1-IT1Q9HBX3 110 aa9.7□□□□□ -0.86
ERCC3-206ENST00000462306 IGLV5-37A0A075B6J1 123 aa9.69□□□□□ -0.86
ERCC3-206ENST00000462306 IGKCP01834 107 aa9.69□□□□□ -0.86
ERCC3-206ENST00000462306 IGLV7-43P04211 117 aa9.69□□□□□ -0.86
ERCC3-206ENST00000462306 MT1HL1P0DM35 61 aa9.69□□□□□ -0.86
ERCC3-206ENST00000462306 MRPL55Q7Z7F7 128 aaKnown RBP9.69□□□□□ -0.86
ERCC3-206ENST00000462306 SYS1-DBNDD2H3BUS1 97 aa9.68□□□□□ -0.86
ERCC3-206ENST00000462306 TSPEAR-AS2P59090 65 aa9.68□□□□□ -0.86
ERCC3-206ENST00000462306 LEPROTO15243 131 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms