RNA–Protein interactions for RNA: ENST00000461642.2

NINL-204, Transcript of ninein like, humanhuman

TSL 3

Gene NINL, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINL-204ENST00000461642 C6orf48Q9UBA6 75 aa9.48□□□□□ -0.89
NINL-204ENST00000461642 H3BRM9 83 aa9.47□□□□□ -0.89
NINL-204ENST00000461642 HSBP1O75506 76 aa9.47□□□□□ -0.89
NINL-204ENST00000461642 RPL37AP61513 92 aaKnown RBP9.47□□□□□ -0.89
NINL-204ENST00000461642 C7orf33Q8WU49 177 aa9.47□□□□□ -0.89
NINL-204ENST00000461642 FLG2Q5D862 2391 aaPredicted RBP9.46□□□□□ -0.89
NINL-204ENST00000461642 VPS13BQ7Z7G8 4022 aa9.46□□□□□ -0.89
NINL-204ENST00000461642 TLX1NBP0CAT3 122 aa9.46□□□□□ -0.9
NINL-204ENST00000461642 IGLC3P0DOY3 106 aa9.46□□□□□ -0.9
NINL-204ENST00000461642 SMIM1B2RUZ4 78 aa9.45□□□□□ -0.9
NINL-204ENST00000461642 CXCL5P42830 114 aa9.45□□□□□ -0.9
NINL-204ENST00000461642 SCO1O75880 301 aa9.44□□□□□ -0.9
NINL-204ENST00000461642 KRTAP10-4P60372 401 aaPredicted RBP9.44□□□□□ -0.9
NINL-204ENST00000461642 IFI27L1Q96BM0 104 aa9.44□□□□□ -0.9
NINL-204ENST00000461642 NDUFC2-KCTD14E9PQ53 114 aa9.43□□□□□ -0.9
NINL-204ENST00000461642 F8VRH5 84 aa9.43□□□□□ -0.9
NINL-204ENST00000461642 SPINK8P0C7L1 97 aa9.43□□□□□ -0.9
NINL-204ENST00000461642 Q6ZRP5 223 aa9.43□□□□□ -0.9
NINL-204ENST00000461642 FAM19A2Q8N3H0 131 aa9.43□□□□□ -0.9
NINL-204ENST00000461642 COX7B2Q8TF08 81 aa9.43□□□□□ -0.9
NINL-204ENST00000461642 TRAV12-1A0A0B4J245 112 aa9.42□□□□□ -0.9
NINL-204ENST00000461642 SERF1AO75920 110 aa9.42□□□□□ -0.9
NINL-204ENST00000461642 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
NINL-204ENST00000461642 C9orf116Q5BN46 136 aaPredicted RBP9.42□□□□□ -0.9
NINL-204ENST00000461642 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
NINL-204ENST00000461642 CHTOPQ9Y3Y2 248 aaKnown RBP9.42□□□□□ -0.9
NINL-204ENST00000461642 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
NINL-204ENST00000461642 ZNF22P17026 224 aaPredicted RBP9.41□□□□□ -0.9
NINL-204ENST00000461642 IGLV5-39A0A0G2JS06 123 aa9.39□□□□□ -0.91
NINL-204ENST00000461642 C11orf86A6NJI1 115 aa9.39□□□□□ -0.91
NINL-204ENST00000461642 LEPROTL1O95214 131 aa9.39□□□□□ -0.91
NINL-204ENST00000461642 LINC00310P59036 64 aa9.39□□□□□ -0.91
NINL-204ENST00000461642 TMEM170BQ5T4T1 132 aa9.39□□□□□ -0.91
NINL-204ENST00000461642 HSPB8Q9UJY1 196 aa9.38□□□□□ -0.91
NINL-204ENST00000461642 NUPR1O60356 82 aa9.37□□□□□ -0.91
NINL-204ENST00000461642 DMBT1Q9UGM3 2413 aaPredicted RBP9.37□□□□□ -0.91
NINL-204ENST00000461642 HIST1H2BKO60814 126 aa9.35□□□□□ -0.91
NINL-204ENST00000461642 HIST1H2BJP06899 126 aa9.35□□□□□ -0.91
NINL-204ENST00000461642 HIST1H2BOP23527 126 aa9.35□□□□□ -0.91
NINL-204ENST00000461642 HIST1H2BBP33778 126 aa9.35□□□□□ -0.91
NINL-204ENST00000461642 HIST1H2BDP58876 126 aa9.35□□□□□ -0.91
NINL-204ENST00000461642 HIST1H2BCP62807 126 aa9.35□□□□□ -0.91
NINL-204ENST00000461642 PRR3P79522 188 aaKnown RBP9.35□□□□□ -0.91
NINL-204ENST00000461642 HIST2H2BEQ16778 126 aa9.35□□□□□ -0.91
NINL-204ENST00000461642 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.35□□□□□ -0.91
NINL-204ENST00000461642 HIST1H2BHQ93079 126 aa9.35□□□□□ -0.91
NINL-204ENST00000461642 HIST1H2BNQ99877 126 aa9.35□□□□□ -0.91
NINL-204ENST00000461642 HIST1H2BMQ99879 126 aa9.35□□□□□ -0.91
NINL-204ENST00000461642 FAM168BA1KXE4 195 aa9.34□□□□□ -0.91
NINL-204ENST00000461642 FABP4P15090 132 aa9.34□□□□□ -0.91
NINL-204ENST00000461642 S100A1P23297 94 aa9.34□□□□□ -0.91
NINL-204ENST00000461642 C9orf129Q5T035 196 aaKnown RBP9.34□□□□□ -0.91
NINL-204ENST00000461642 SFTA2Q6UW10 78 aa9.34□□□□□ -0.91
NINL-204ENST00000461642 FAM19A5Q7Z5A7 132 aaPredicted RBP9.34□□□□□ -0.91
NINL-204ENST00000461642 MYCBP2O75592 4640 aa9.34□□□□□ -0.91
NINL-204ENST00000461642 H0Y8G0 127 aa9.33□□□□□ -0.92
NINL-204ENST00000461642 ODF1Q14990 250 aa9.33□□□□□ -0.92
NINL-204ENST00000461642 PHF5AQ7RTV0 110 aaKnown RBP9.33□□□□□ -0.92
NINL-204ENST00000461642 TMEM223A0PJW6 202 aa9.32□□□□□ -0.92
NINL-204ENST00000461642 HNRNPA3P51991 378 aaKnown RBP9.32□□□□□ -0.92
NINL-204ENST00000461642 XAGE1AQ9HD64 81 aa9.32□□□□□ -0.92
NINL-204ENST00000461642 KRTAP29-1A8MX34 341 aaPredicted RBP9.31□□□□□ -0.92
NINL-204ENST00000461642 M0QXV9 152 aa9.3□□□□□ -0.92
NINL-204ENST00000461642 PLNP26678 52 aa9.3□□□□□ -0.92
NINL-204ENST00000461642 KRTAP7-1Q8IUC3 87 aa9.3□□□□□ -0.92
NINL-204ENST00000461642 MAP1LC3CQ9BXW4 147 aa9.3□□□□□ -0.92
NINL-204ENST00000461642 J3QL48 77 aa9.29□□□□□ -0.92
NINL-204ENST00000461642 OXTP01178 125 aa9.29□□□□□ -0.92
NINL-204ENST00000461642 COX17Q14061 63 aa9.29□□□□□ -0.92
NINL-204ENST00000461642 DPM2O94777 84 aa9.28□□□□□ -0.92
NINL-204ENST00000461642 PFN2P35080 140 aa9.28□□□□□ -0.92
NINL-204ENST00000461642 PSORS1C2Q9UIG4 136 aa9.28□□□□□ -0.92
NINL-204ENST00000461642 ERG28Q9UKR5 140 aa9.28□□□□□ -0.92
NINL-204ENST00000461642 ATP6V1G1O75348 118 aa9.27□□□□□ -0.93
NINL-204ENST00000461642 UBE2BP63146 152 aa9.27□□□□□ -0.93
NINL-204ENST00000461642 LBHQ53QV2 105 aaPredicted RBP9.27□□□□□ -0.93
NINL-204ENST00000461642 SERTAD4-AS1Q5TG53 156 aa9.27□□□□□ -0.93
NINL-204ENST00000461642 ZNF625Q96I27 306 aaPredicted RBP9.27□□□□□ -0.93
NINL-204ENST00000461642 C22orf24Q9Y442 160 aa9.27□□□□□ -0.93
NINL-204ENST00000461642 C1orf137Q5JT78 98 aa9.26□□□□□ -0.93
NINL-204ENST00000461642 COA6Q5JTJ3 125 aaKnown RBP9.26□□□□□ -0.93
NINL-204ENST00000461642 SPINK6Q6UWN8 80 aa9.26□□□□□ -0.93
NINL-204ENST00000461642 TP73-AS1Q9UF72 201 aa9.26□□□□□ -0.93
NINL-204ENST00000461642 PLA2G2DQ9UNK4 145 aa9.26□□□□□ -0.93
NINL-204ENST00000461642 IGKCP01834 107 aa9.25□□□□□ -0.93
NINL-204ENST00000461642 HERVK_113P61574 105 aa9.25□□□□□ -0.93
NINL-204ENST00000461642 SRSF9Q13242 221 aaKnown RBP eCLIP9.24□□□□□ -0.93
NINL-204ENST00000461642 PLEKHB2Q96CS7 222 aa9.24□□□□□ -0.93
NINL-204ENST00000461642 PMCHL2Q9BQD1 86 aa9.24□□□□□ -0.93
NINL-204ENST00000461642 SYS1-DBNDD2H3BUS1 97 aa9.23□□□□□ -0.93
NINL-204ENST00000461642 LINC00158P58513 81 aa9.23□□□□□ -0.93
NINL-204ENST00000461642 HERV-K104P63124 156 aa9.23□□□□□ -0.93
NINL-204ENST00000461642 MRPL55Q7Z7F7 128 aaKnown RBP9.23□□□□□ -0.93
NINL-204ENST00000461642 KRTAP11-1Q8IUC1 163 aa9.23□□□□□ -0.93
NINL-204ENST00000461642 SND1-IT1Q9HBX3 110 aa9.23□□□□□ -0.93
NINL-204ENST00000461642 NDUFA12Q9UI09 145 aa9.23□□□□□ -0.93
NINL-204ENST00000461642 MYMXA0A1B0GTQ4 84 aa9.22□□□□□ -0.93
NINL-204ENST00000461642 LINC00587B1AMM8 73 aa9.22□□□□□ -0.93
NINL-204ENST00000461642 LEPROTO15243 131 aa9.22□□□□□ -0.93
NINL-204ENST00000461642 LRP1Q07954 4544 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms