RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 C6orf48Q9UBA6 75 aa6.7□□□□□ -1.34
TRAPPC12-213ENST00000461577 TRBV30A0A0K0K1B3 111 aa6.69□□□□□ -1.34
TRAPPC12-213ENST00000461577 COLCA2A8K830 154 aa6.69□□□□□ -1.34
TRAPPC12-213ENST00000461577 HSBP1O75506 76 aa6.69□□□□□ -1.34
TRAPPC12-213ENST00000461577 C2orf82Q6UX34 121 aa6.69□□□□□ -1.34
TRAPPC12-213ENST00000461577 PCLOQ9Y6V0 5065 aa6.69□□□□□ -1.34
TRAPPC12-213ENST00000461577 IGLV5-45A0A087WSX0 123 aa6.68□□□□□ -1.34
TRAPPC12-213ENST00000461577 H3BRM9 83 aa6.68□□□□□ -1.34
TRAPPC12-213ENST00000461577 TLX1NBP0CAT3 122 aa6.68□□□□□ -1.34
TRAPPC12-213ENST00000461577 IGLC3P0DOY3 106 aa6.68□□□□□ -1.34
TRAPPC12-213ENST00000461577 SMIM1B2RUZ4 78 aa6.67□□□□□ -1.34
TRAPPC12-213ENST00000461577 SCO1O75880 301 aa6.67□□□□□ -1.34
TRAPPC12-213ENST00000461577 SPINK8P0C7L1 97 aa6.67□□□□□ -1.34
TRAPPC12-213ENST00000461577 CXCL5P42830 114 aa6.67□□□□□ -1.34
TRAPPC12-213ENST00000461577 IFI27L1Q96BM0 104 aa6.67□□□□□ -1.34
TRAPPC12-213ENST00000461577 GAGE2EQ4V326 116 aa6.66□□□□□ -1.34
TRAPPC12-213ENST00000461577 Q6ZRP5 223 aa6.66□□□□□ -1.34
TRAPPC12-213ENST00000461577 COX7B2Q8TF08 81 aa6.66□□□□□ -1.34
TRAPPC12-213ENST00000461577 GAGE2DQ9UEU5 116 aa6.66□□□□□ -1.34
TRAPPC12-213ENST00000461577 CHTOPQ9Y3Y2 248 aaKnown RBP6.66□□□□□ -1.34
TRAPPC12-213ENST00000461577 PKHD1L1Q86WI1 4243 aa6.65□□□□□ -1.34
TRAPPC12-213ENST00000461577 A0A1W2PNN7 141 aa6.65□□□□□ -1.34
TRAPPC12-213ENST00000461577 NDUFC2-KCTD14E9PQ53 114 aa6.65□□□□□ -1.34
TRAPPC12-213ENST00000461577 F8VRH5 84 aa6.65□□□□□ -1.34
TRAPPC12-213ENST00000461577 KRTAP10-4P60372 401 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC12-213ENST00000461577 C9orf116Q5BN46 136 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC12-213ENST00000461577 FAM19A2Q8N3H0 131 aa6.65□□□□□ -1.34
TRAPPC12-213ENST00000461577 TRAV12-1A0A0B4J245 112 aa6.64□□□□□ -1.35
TRAPPC12-213ENST00000461577 SERF1AO75920 110 aa6.64□□□□□ -1.35
TRAPPC12-213ENST00000461577 ZNF22P17026 224 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC12-213ENST00000461577 TMEM170BQ5T4T1 132 aa6.64□□□□□ -1.35
TRAPPC12-213ENST00000461577 C11orf86A6NJI1 115 aa6.63□□□□□ -1.35
TRAPPC12-213ENST00000461577 LEPROTL1O95214 131 aa6.63□□□□□ -1.35
TRAPPC12-213ENST00000461577 SRRM2Q9UQ35 2752 aaKnown RBP6.63□□□□□ -1.35
TRAPPC12-213ENST00000461577 LINC00310P59036 64 aa6.62□□□□□ -1.35
TRAPPC12-213ENST00000461577 FAM19A5Q7Z5A7 132 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC12-213ENST00000461577 IGLV5-39A0A0G2JS06 123 aa6.61□□□□□ -1.35
TRAPPC12-213ENST00000461577 FAM168BA1KXE4 195 aa6.61□□□□□ -1.35
TRAPPC12-213ENST00000461577 H0Y8G0 127 aa6.61□□□□□ -1.35
TRAPPC12-213ENST00000461577 PRR3P79522 188 aaKnown RBP6.61□□□□□ -1.35
TRAPPC12-213ENST00000461577 PHF5AQ7RTV0 110 aaKnown RBP6.61□□□□□ -1.35
TRAPPC12-213ENST00000461577 HSPB8Q9UJY1 196 aa6.61□□□□□ -1.35
TRAPPC12-213ENST00000461577 NUPR1O60356 82 aa6.6□□□□□ -1.35
TRAPPC12-213ENST00000461577 FABP4P15090 132 aa6.6□□□□□ -1.35
TRAPPC12-213ENST00000461577 HNRNPA3P51991 378 aaKnown RBP6.6□□□□□ -1.35
TRAPPC12-213ENST00000461577 FLG2Q5D862 2391 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC12-213ENST00000461577 J3QL48 77 aa6.59□□□□□ -1.35
TRAPPC12-213ENST00000461577 C9orf129Q5T035 196 aaKnown RBP6.59□□□□□ -1.35
TRAPPC12-213ENST00000461577 TMEM223A0PJW6 202 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 M0QXV9 152 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 HIST1H2BKO60814 126 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 HIST1H2BJP06899 126 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 HIST1H2BOP23527 126 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 HIST1H2BBP33778 126 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 HIST1H2BDP58876 126 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 HIST1H2BCP62807 126 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 HIST2H2BEQ16778 126 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 SFTA2Q6UW10 78 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 HIST1H2BHQ93079 126 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 HIST1H2BNQ99877 126 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 HIST1H2BMQ99879 126 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 XAGE1AQ9HD64 81 aa6.58□□□□□ -1.36
TRAPPC12-213ENST00000461577 KRTAP29-1A8MX34 341 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC12-213ENST00000461577 ATP6V1G1O75348 118 aa6.57□□□□□ -1.36
TRAPPC12-213ENST00000461577 S100A1P23297 94 aa6.57□□□□□ -1.36
TRAPPC12-213ENST00000461577 UBE2BP63146 152 aa6.57□□□□□ -1.36
TRAPPC12-213ENST00000461577 ODF1Q14990 250 aa6.57□□□□□ -1.36
TRAPPC12-213ENST00000461577 MAP1LC3CQ9BXW4 147 aa6.57□□□□□ -1.36
TRAPPC12-213ENST00000461577 OXTP01178 125 aa6.56□□□□□ -1.36
TRAPPC12-213ENST00000461577 PFN2P35080 140 aa6.56□□□□□ -1.36
TRAPPC12-213ENST00000461577 C1orf137Q5JT78 98 aa6.56□□□□□ -1.36
TRAPPC12-213ENST00000461577 PSORS1C2Q9UIG4 136 aa6.56□□□□□ -1.36
TRAPPC12-213ENST00000461577 MYCBP2O75592 4640 aa6.55□□□□□ -1.36
TRAPPC12-213ENST00000461577 PLNP26678 52 aa6.55□□□□□ -1.36
TRAPPC12-213ENST00000461577 LBHQ53QV2 105 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC12-213ENST00000461577 SERTAD4-AS1Q5TG53 156 aa6.55□□□□□ -1.36
TRAPPC12-213ENST00000461577 KRTAP7-1Q8IUC3 87 aa6.55□□□□□ -1.36
TRAPPC12-213ENST00000461577 ZNF625Q96I27 306 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC12-213ENST00000461577 ERG28Q9UKR5 140 aa6.55□□□□□ -1.36
TRAPPC12-213ENST00000461577 DPM2O94777 84 aa6.54□□□□□ -1.36
TRAPPC12-213ENST00000461577 COX17Q14061 63 aa6.54□□□□□ -1.36
TRAPPC12-213ENST00000461577 SPINK6Q6UWN8 80 aa6.54□□□□□ -1.36
TRAPPC12-213ENST00000461577 PMCHL2Q9BQD1 86 aa6.54□□□□□ -1.36
TRAPPC12-213ENST00000461577 C22orf24Q9Y442 160 aa6.54□□□□□ -1.36
TRAPPC12-213ENST00000461577 FAT3Q8TDW7 4589 aa6.53□□□□□ -1.36
TRAPPC12-213ENST00000461577 IGKCP01834 107 aa6.53□□□□□ -1.36
TRAPPC12-213ENST00000461577 HERVK_113P61574 105 aa6.53□□□□□ -1.36
TRAPPC12-213ENST00000461577 PLA2G2DQ9UNK4 145 aa6.53□□□□□ -1.36
TRAPPC12-213ENST00000461577 LINC00158P58513 81 aa6.52□□□□□ -1.37
TRAPPC12-213ENST00000461577 NKAPP1Q8N9T2 125 aa6.52□□□□□ -1.37
TRAPPC12-213ENST00000461577 PLEKHB2Q96CS7 222 aa6.52□□□□□ -1.37
TRAPPC12-213ENST00000461577 TP73-AS1Q9UF72 201 aa6.52□□□□□ -1.37
TRAPPC12-213ENST00000461577 MYMXA0A1B0GTQ4 84 aa6.51□□□□□ -1.37
TRAPPC12-213ENST00000461577 LEPROTO15243 131 aa6.51□□□□□ -1.37
TRAPPC12-213ENST00000461577 HERV-K104P63124 156 aa6.51□□□□□ -1.37
TRAPPC12-213ENST00000461577 SRSF9Q13242 221 aaKnown RBP eCLIP6.51□□□□□ -1.374e-7■■■□□ 16.1
TRAPPC12-213ENST00000461577 MEIG1Q5JSS6 88 aa6.51□□□□□ -1.37
TRAPPC12-213ENST00000461577 REG3GQ6UW15 175 aa6.51□□□□□ -1.37
TRAPPC12-213ENST00000461577 MRPL55Q7Z7F7 128 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms