RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 CARD19Q96LW7 228 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 CAMK2N2Q96S95 79 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 HIST1H2BLQ99880 126 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 FAM30AQ9NZY2 134 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 TOMM7Q9P0U1 55 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 TMEM223A0PJW6 202 aa7.24□□□□□ -1.25
SSBP1-202ENST00000461433 LINC01545Q5VT33 79 aa7.24□□□□□ -1.25
SSBP1-202ENST00000461433 PLNP26678 52 aa7.23□□□□□ -1.25
SSBP1-202ENST00000461433 C6orf226Q5I0X4 101 aa7.23□□□□□ -1.25
SSBP1-202ENST00000461433 PET117Q6UWS5 81 aa7.23□□□□□ -1.25
SSBP1-202ENST00000461433 Q6ZSA8 131 aa7.23□□□□□ -1.25
SSBP1-202ENST00000461433 COX7B2Q8TF08 81 aa7.23□□□□□ -1.25
SSBP1-202ENST00000461433 NDUFA1O15239 70 aa7.22□□□□□ -1.25
SSBP1-202ENST00000461433 DPM2O94777 84 aa7.22□□□□□ -1.25
SSBP1-202ENST00000461433 PRSS2P07478 247 aa7.22□□□□□ -1.25
SSBP1-202ENST00000461433 KRTDAPP60985 99 aa7.22□□□□□ -1.25
SSBP1-202ENST00000461433 C6orf48Q9UBA6 75 aa7.22□□□□□ -1.25
SSBP1-202ENST00000461433 PANO1I0J062 215 aa7.22□□□□□ -1.25
SSBP1-202ENST00000461433 IGKCP01834 107 aa7.22□□□□□ -1.25
SSBP1-202ENST00000461433 S100A2P29034 98 aa7.22□□□□□ -1.25
SSBP1-202ENST00000461433 RNF151Q2KHN1 245 aa7.22□□□□□ -1.25
SSBP1-202ENST00000461433 LINC00518Q8N0U6 118 aa7.22□□□□□ -1.25
SSBP1-202ENST00000461433 XGP55808 180 aa7.21□□□□□ -1.26
SSBP1-202ENST00000461433 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.21□□□□□ -1.26
SSBP1-202ENST00000461433 CKS1BP61024 79 aa7.2□□□□□ -1.26
SSBP1-202ENST00000461433 DNAH8Q96JB1 4490 aa7.2□□□□□ -1.26
SSBP1-202ENST00000461433 A0A096LNI7 61 aa7.19□□□□□ -1.26
SSBP1-202ENST00000461433 TRBV30A0A0K0K1B3 111 aa7.19□□□□□ -1.26
SSBP1-202ENST00000461433 CDK2AP2O75956 126 aa7.19□□□□□ -1.26
SSBP1-202ENST00000461433 CHTF8P0CG12 524 aa7.19□□□□□ -1.26
SSBP1-202ENST00000461433 CXCL5P42830 114 aa7.19□□□□□ -1.26
SSBP1-202ENST00000461433 S100A12P80511 92 aa7.19□□□□□ -1.26
SSBP1-202ENST00000461433 CIRBPQ14011 172 aaKnown RBP7.19□□□□□ -1.26
SSBP1-202ENST00000461433 C9orf116Q5BN46 136 aaPredicted RBP7.19□□□□□ -1.26
SSBP1-202ENST00000461433 APOBP04114 4563 aaKnown RBP7.19□□□□□ -1.26
SSBP1-202ENST00000461433 KIAA1109Q2LD37 5005 aa7.18□□□□□ -1.26
SSBP1-202ENST00000461433 LOC107984640A0A0U1RRK4 108 aa7.18□□□□□ -1.26
SSBP1-202ENST00000461433 TLX1NBP0CAT3 122 aa7.18□□□□□ -1.26
SSBP1-202ENST00000461433 HAMPP81172 84 aa7.18□□□□□ -1.26
SSBP1-202ENST00000461433 ZNF625Q96I27 306 aaPredicted RBP7.18□□□□□ -1.26
SSBP1-202ENST00000461433 AKR1D1P51857 326 aa7.17□□□□□ -1.26
SSBP1-202ENST00000461433 TSPEAR-AS2P59090 65 aa7.17□□□□□ -1.26
SSBP1-202ENST00000461433 CTAG1AP78358 180 aa7.17□□□□□ -1.26
SSBP1-202ENST00000461433 Q6ZRP5 223 aa7.17□□□□□ -1.26
SSBP1-202ENST00000461433 SPACA4Q8TDM5 124 aa7.17□□□□□ -1.26
SSBP1-202ENST00000461433 KRTAP4-8Q9BYQ9 185 aa7.17□□□□□ -1.26
SSBP1-202ENST00000461433 RYR1P21817 5038 aa7.16□□□□□ -1.26
SSBP1-202ENST00000461433 IGKV2-24A0A0C4DH68 120 aa7.16□□□□□ -1.26
SSBP1-202ENST00000461433 PCP4L1A6NKN8 68 aa7.16□□□□□ -1.26
SSBP1-202ENST00000461433 LEPROTO15243 131 aa7.16□□□□□ -1.26
SSBP1-202ENST00000461433 PTTG1IPP53801 180 aa7.16□□□□□ -1.26
SSBP1-202ENST00000461433 SCXQ7RTU7 201 aa7.16□□□□□ -1.26
SSBP1-202ENST00000461433 STPG4Q8N801 248 aa7.16□□□□□ -1.26
SSBP1-202ENST00000461433 KRTAP17-1Q9BYP8 105 aa7.16□□□□□ -1.26
SSBP1-202ENST00000461433 CIRBP-AS1Q8TBR5 109 aa7.16□□□□□ -1.26
SSBP1-202ENST00000461433 C20orf202A1L168 122 aa7.15□□□□□ -1.27
SSBP1-202ENST00000461433 E9PLD3 99 aa7.15□□□□□ -1.27
SSBP1-202ENST00000461433 NDUFC2-KCTD14E9PQ53 114 aa7.15□□□□□ -1.27
SSBP1-202ENST00000461433 HERVK_113P61574 105 aa7.15□□□□□ -1.27
SSBP1-202ENST00000461433 RPL18AQ02543 176 aaKnown RBP7.15□□□□□ -1.27
SSBP1-202ENST00000461433 GAGE2BQ13066 116 aa7.15□□□□□ -1.27
SSBP1-202ENST00000461433 ATOH7Q8N100 152 aa7.15□□□□□ -1.27
SSBP1-202ENST00000461433 PKIGQ9Y2B9 76 aa7.15□□□□□ -1.27
SSBP1-202ENST00000461433 A0A087WYN8 130 aa7.14□□□□□ -1.27
SSBP1-202ENST00000461433 J3QQQ9 107 aa7.14□□□□□ -1.27
SSBP1-202ENST00000461433 MAJINQ3KP22 176 aa7.14□□□□□ -1.27
SSBP1-202ENST00000461433 PLEKHB2Q96CS7 222 aa7.14□□□□□ -1.27
SSBP1-202ENST00000461433 C12orf57Q99622 126 aa7.14□□□□□ -1.27
SSBP1-202ENST00000461433 HSPG2P98160 4391 aa7.13□□□□□ -1.27
SSBP1-202ENST00000461433 LINC00474Q9P2X8 69 aa7.13□□□□□ -1.27
SSBP1-202ENST00000461433 IGKV2D-26A0A0A0MRZ7 120 aa7.12□□□□□ -1.27
SSBP1-202ENST00000461433 EPM2AB3EWF7 344 aa7.12□□□□□ -1.27
SSBP1-202ENST00000461433 GAGE2EQ4V326 116 aa7.12□□□□□ -1.27
SSBP1-202ENST00000461433 SFTA2Q6UW10 78 aa7.12□□□□□ -1.27
SSBP1-202ENST00000461433 PLAC8Q9NZF1 115 aa7.12□□□□□ -1.27
SSBP1-202ENST00000461433 GAGE2DQ9UEU5 116 aa7.12□□□□□ -1.27
SSBP1-202ENST00000461433 NDUFA12Q9UI09 145 aa7.12□□□□□ -1.27
SSBP1-202ENST00000461433 A0A1W2PNN7 141 aa7.12□□□□□ -1.27
SSBP1-202ENST00000461433 C9orf129Q5T035 196 aaKnown RBP7.12□□□□□ -1.27
SSBP1-202ENST00000461433 DPH3Q96FX2 82 aa7.12□□□□□ -1.27
SSBP1-202ENST00000461433 ERG28Q9UKR5 140 aa7.12□□□□□ -1.27
SSBP1-202ENST00000461433 PFN2P35080 140 aa7.11□□□□□ -1.27
SSBP1-202ENST00000461433 COX17Q14061 63 aa7.11□□□□□ -1.27
SSBP1-202ENST00000461433 ANKRD39Q53RE8 183 aa7.11□□□□□ -1.27
SSBP1-202ENST00000461433 KRTAP7-1Q8IUC3 87 aa7.11□□□□□ -1.27
SSBP1-202ENST00000461433 MYMXA0A1B0GTQ4 84 aa7.1□□□□□ -1.27
SSBP1-202ENST00000461433 FAM168BA1KXE4 195 aa7.1□□□□□ -1.27
SSBP1-202ENST00000461433 LGALS3P17931 250 aaKnown RBP7.1□□□□□ -1.27
SSBP1-202ENST00000461433 HERV-K104P63124 156 aa7.1□□□□□ -1.27
SSBP1-202ENST00000461433 SCGB1D1O95968 90 aa7.09□□□□□ -1.27
SSBP1-202ENST00000461433 SMR3BP02814 79 aaPredicted RBP7.09□□□□□ -1.27
SSBP1-202ENST00000461433 SMIM6P0DI80 62 aa7.09□□□□□ -1.27
SSBP1-202ENST00000461433 NMUP48645 174 aa7.09□□□□□ -1.27
SSBP1-202ENST00000461433 TTTY13Q9BZ97 58 aa7.09□□□□□ -1.27
SSBP1-202ENST00000461433 XAGE1AQ9HD64 81 aa7.09□□□□□ -1.27
SSBP1-202ENST00000461433 HERC2O95714 4834 aa7.09□□□□□ -1.27
SSBP1-202ENST00000461433 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.27
SSBP1-202ENST00000461433 SMIM13P0DJ93 91 aa7.08□□□□□ -1.28
SSBP1-202ENST00000461433 A0A0U1RRA0 63 aa7.07□□□□□ -1.28
SSBP1-202ENST00000461433 JOSD1Q15040 202 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms