RNA–Protein interactions for RNA: ENST00000460945.5

APTX-210, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-210ENST00000460945 LINC01546A6NGU7 62 aa10.14□□□□□ -0.79
APTX-210ENST00000460945 HERVK_113P63121 156 aa10.14□□□□□ -0.79
APTX-210ENST00000460945 RHEBQ15382 184 aa10.14□□□□□ -0.79
APTX-210ENST00000460945 C9orf129Q5T035 196 aaKnown RBP10.14□□□□□ -0.79
APTX-210ENST00000460945 REG3GQ6UW15 175 aa10.14□□□□□ -0.79
APTX-210ENST00000460945 GEMIN7Q9H840 131 aaKnown RBP10.14□□□□□ -0.79
APTX-210ENST00000460945 NDUFC2-KCTD14E9PQ53 114 aa10.13□□□□□ -0.79
APTX-210ENST00000460945 SEC11AP67812 179 aa10.13□□□□□ -0.79
APTX-210ENST00000460945 COX19Q49B96 90 aa10.13□□□□□ -0.79
APTX-210ENST00000460945 C6orf226Q5I0X4 101 aa10.13□□□□□ -0.79
APTX-210ENST00000460945 CKS1BP61024 79 aa10.12□□□□□ -0.79
APTX-210ENST00000460945 Q8IZM0 81 aa10.12□□□□□ -0.79
APTX-210ENST00000460945 KRTAP10-8P60410 259 aa10.11□□□□□ -0.79
APTX-210ENST00000460945 FA2HQ7L5A8 372 aa10.11□□□□□ -0.79
APTX-210ENST00000460945 LINC00469Q8N7U9 141 aa10.11□□□□□ -0.79
APTX-210ENST00000460945 M0QXV9 152 aa10.1□□□□□ -0.79
APTX-210ENST00000460945 CST9LQ9H4G1 147 aa10.1□□□□□ -0.79
APTX-210ENST00000460945 SMCO4Q9NRQ5 59 aa10.1□□□□□ -0.79
APTX-210ENST00000460945 TINCRA0A1B0GVN0 87 aa10.09□□□□□ -0.79
APTX-210ENST00000460945 SMIM1B2RUZ4 78 aa10.09□□□□□ -0.79
APTX-210ENST00000460945 IGLV7-43P04211 117 aa10.09□□□□□ -0.79
APTX-210ENST00000460945 APOC3P02656 99 aa10.08□□□□□ -0.8
APTX-210ENST00000460945 URB1-AS1Q96HZ7 61 aa10.08□□□□□ -0.8
APTX-210ENST00000460945 TRAPPC1Q9Y5R8 145 aa10.08□□□□□ -0.8
APTX-210ENST00000460945 UBR4Q5T4S7 5183 aa10.07□□□□□ -0.8
APTX-210ENST00000460945 IGLV5-45A0A087WSX0 123 aa10.07□□□□□ -0.8
APTX-210ENST00000460945 LINC01549A6NIU2 74 aa10.07□□□□□ -0.8
APTX-210ENST00000460945 F8VRH5 84 aa10.07□□□□□ -0.8
APTX-210ENST00000460945 PMVKQ15126 192 aa10.07□□□□□ -0.8
APTX-210ENST00000460945 XAGE1AQ9HD64 81 aa10.07□□□□□ -0.8
APTX-210ENST00000460945 A0A096LNJ9 63 aa10.06□□□□□ -0.8
APTX-210ENST00000460945 UBE2BP63146 152 aa10.06□□□□□ -0.8
APTX-210ENST00000460945 C18orf32Q8TCD1 76 aa10.06□□□□□ -0.8
APTX-210ENST00000460945 SPINK8P0C7L1 97 aa10.05□□□□□ -0.8
APTX-210ENST00000460945 PDZD11Q5EBL8 140 aa10.05□□□□□ -0.8
APTX-210ENST00000460945 COX7B2Q8TF08 81 aa10.05□□□□□ -0.8
APTX-210ENST00000460945 LINC00614P0C842 121 aa10.04□□□□□ -0.8
APTX-210ENST00000460945 CXCL5P42830 114 aa10.03□□□□□ -0.8
APTX-210ENST00000460945 PMCHL1Q16048 86 aa10.03□□□□□ -0.8
APTX-210ENST00000460945 DIRC1Q969H9 104 aa10.03□□□□□ -0.8
APTX-210ENST00000460945 C22orf24Q9Y442 160 aa10.03□□□□□ -0.8
APTX-210ENST00000460945 SNAPINO95295 136 aa10.02□□□□□ -0.81
APTX-210ENST00000460945 NDUFA6P56556 154 aa10.02□□□□□ -0.81
APTX-210ENST00000460945 H0Y9J4 135 aa10.01□□□□□ -0.81
APTX-210ENST00000460945 HBDP02042 147 aa10.01□□□□□ -0.81
APTX-210ENST00000460945 SVBPQ8N300 66 aa10.01□□□□□ -0.81
APTX-210ENST00000460945 IGLC3P0DOY3 106 aa10□□□□□ -0.81
APTX-210ENST00000460945 RAB5BP61020 215 aa10□□□□□ -0.81
APTX-210ENST00000460945 NDUFA5Q16718 116 aa10□□□□□ -0.81
APTX-210ENST00000460945 LRP2P98164 4655 aa10□□□□□ -0.81
APTX-210ENST00000460945 YPEL4Q96NS1 127 aa9.99□□□□□ -0.81
APTX-210ENST00000460945 H3BRM9 83 aa9.98□□□□□ -0.81
APTX-210ENST00000460945 ZNF22P17026 224 aaPredicted RBP9.98□□□□□ -0.81
APTX-210ENST00000460945 PRR26Q8N8Z3 221 aa9.98□□□□□ -0.81
APTX-210ENST00000460945 KRTAP1-4P0C5Y4 121 aa9.96□□□□□ -0.82
APTX-210ENST00000460945 LBHQ53QV2 105 aaPredicted RBP9.96□□□□□ -0.82
APTX-210ENST00000460945 BAGE3Q86Y29 109 aa9.96□□□□□ -0.82
APTX-210ENST00000460945 IGLV5-39A0A0G2JS06 123 aa9.95□□□□□ -0.82
APTX-210ENST00000460945 MRPL55Q7Z7F7 128 aaKnown RBP9.95□□□□□ -0.82
APTX-210ENST00000460945 TP73-AS1Q9UF72 201 aa9.95□□□□□ -0.82
APTX-210ENST00000460945 C11orf86A6NJI1 115 aa9.94□□□□□ -0.82
APTX-210ENST00000460945 RPL37AP8A6NKH3 93 aa9.94□□□□□ -0.82
APTX-210ENST00000460945 ATP5LO75964 103 aa9.94□□□□□ -0.82
APTX-210ENST00000460945 LINC00167Q96N53 147 aa9.94□□□□□ -0.82
APTX-210ENST00000460945 NUPR1O60356 82 aa9.93□□□□□ -0.82
APTX-210ENST00000460945 ZNF861PO60384 105 aa9.93□□□□□ -0.82
APTX-210ENST00000460945 PFN2P35080 140 aa9.93□□□□□ -0.82
APTX-210ENST00000460945 GAGE10A6NGK3 116 aa9.92□□□□□ -0.82
APTX-210ENST00000460945 SCO1O75880 301 aa9.91□□□□□ -0.82
APTX-210ENST00000460945 TMEM170BQ5T4T1 132 aa9.91□□□□□ -0.82
APTX-210ENST00000460945 CBLN2Q8IUK8 224 aa9.91□□□□□ -0.82
APTX-210ENST00000460945 ZNF625Q96I27 306 aaPredicted RBP9.9□□□□□ -0.82
APTX-210ENST00000460945 CHTOPQ9Y3Y2 248 aaKnown RBP9.9□□□□□ -0.82
APTX-210ENST00000460945 IGLV1-50A0A075B6I6 118 aa9.89□□□□□ -0.83
APTX-210ENST00000460945 IGLV5-37A0A075B6J1 123 aa9.89□□□□□ -0.83
APTX-210ENST00000460945 CHCHD1Q96BP2 118 aaKnown RBP9.89□□□□□ -0.83
APTX-210ENST00000460945 ERG28Q9UKR5 140 aa9.89□□□□□ -0.83
APTX-210ENST00000460945 BCE1O60756 84 aa9.88□□□□□ -0.83
APTX-210ENST00000460945 NKAPP1Q8N9T2 125 aa9.88□□□□□ -0.83
APTX-210ENST00000460945 IFI27L1Q96BM0 104 aa9.88□□□□□ -0.83
APTX-210ENST00000460945 LPAP08519 4548 aa9.87□□□□□ -0.83
APTX-210ENST00000460945 SND1-IT1Q9HBX3 110 aa9.87□□□□□ -0.83
APTX-210ENST00000460945 FAM19A2Q8N3H0 131 aa9.86□□□□□ -0.83
APTX-210ENST00000460945 TRAV12-1A0A0B4J245 112 aa9.85□□□□□ -0.83
APTX-210ENST00000460945 TMEM223A0PJW6 202 aa9.85□□□□□ -0.83
APTX-210ENST00000460945 VPREB1P12018 145 aa9.85□□□□□ -0.83
APTX-210ENST00000460945 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
APTX-210ENST00000460945 SLC7A5P1Q8MH63 180 aa9.85□□□□□ -0.83
APTX-210ENST00000460945 Q8NDZ9 215 aa9.85□□□□□ -0.83
APTX-210ENST00000460945 IGKV2-28A0A075B6P5 120 aa9.84□□□□□ -0.83
APTX-210ENST00000460945 IGKV2D-28P01615 120 aa9.84□□□□□ -0.83
APTX-210ENST00000460945 TRGC2P03986 189 aa9.84□□□□□ -0.83
APTX-210ENST00000460945 HSBP1O75506 76 aa9.83□□□□□ -0.84
APTX-210ENST00000460945 COX17Q14061 63 aa9.83□□□□□ -0.84
APTX-210ENST00000460945 KRTAP13-1Q8IUC0 172 aa9.82□□□□□ -0.84
APTX-210ENST00000460945 A0A0U1RRA0 63 aa9.81□□□□□ -0.84
APTX-210ENST00000460945 RPL13AP40429 203 aaKnown RBP9.81□□□□□ -0.84
APTX-210ENST00000460945 A0A087X002 238 aa9.8□□□□□ -0.84
APTX-210ENST00000460945 UBE2AP49459 152 aa9.8□□□□□ -0.84
APTX-210ENST00000460945 LINC00158P58513 81 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms