RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 UBE2D4Q9Y2X8 147 aa0.61□□□□□ -2.31
VBP1-202ENST00000460509 ZDBF2Q9HCK1 2354 aa0.61□□□□□ -2.31
VBP1-202ENST00000460509 MYO7BQ6PIF6 2116 aa0.61□□□□□ -2.31
VBP1-202ENST00000460509 LRRC9Q6ZRR7 1453 aa0.61□□□□□ -2.31
VBP1-202ENST00000460509 APCP25054 2843 aa0.6□□□□□ -2.31
VBP1-202ENST00000460509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.6□□□□□ -2.31
VBP1-202ENST00000460509 A0A0D9SFI3 127 aa0.6□□□□□ -2.31
VBP1-202ENST00000460509 D6R8Y8 96 aa0.6□□□□□ -2.31
VBP1-202ENST00000460509 S100A3P33764 101 aa0.6□□□□□ -2.31
VBP1-202ENST00000460509 SMIM11AP58511 58 aa0.6□□□□□ -2.31
VBP1-202ENST00000460509 SNRPFP62306 86 aaKnown RBP0.6□□□□□ -2.31
VBP1-202ENST00000460509 ALKAL2Q6UX46 152 aa0.6□□□□□ -2.31
VBP1-202ENST00000460509 C6orf201Q7Z4U5 140 aa0.6□□□□□ -2.31
VBP1-202ENST00000460509 MUSTN1Q8IVN3 82 aa0.6□□□□□ -2.31
VBP1-202ENST00000460509 SPCS1Q9Y6A9 102 aa0.6□□□□□ -2.31
VBP1-202ENST00000460509 ATP7BP35670 1465 aa0.6□□□□□ -2.31
VBP1-202ENST00000460509 KIAA0556O60303 1618 aa0.6□□□□□ -2.31
VBP1-202ENST00000460509 KDM5DQ9BY66 1539 aa0.59□□□□□ -2.31
VBP1-202ENST00000460509 TRBV7-4A0A0J9YYF1 115 aa0.59□□□□□ -2.31
VBP1-202ENST00000460509 LEPROTL1O95214 131 aa0.59□□□□□ -2.31
VBP1-202ENST00000460509 NMSQ5H8A3 153 aa0.59□□□□□ -2.31
VBP1-202ENST00000460509 DEFB123Q8N688 67 aa0.59□□□□□ -2.31
VBP1-202ENST00000460509 PRO0255Q9UI72 69 aa0.59□□□□□ -2.31
VBP1-202ENST00000460509 SUPT6HQ7KZ85 1726 aaKnown RBP0.58□□□□□ -2.32
VBP1-202ENST00000460509 CFAP74Q9C0B2 1584 aa0.58□□□□□ -2.32
VBP1-202ENST00000460509 IQCF6A8MYZ5 107 aa0.58□□□□□ -2.32
VBP1-202ENST00000460509 MAP3K1Q13233 1512 aa0.58□□□□□ -2.32
VBP1-202ENST00000460509 RRBP1Q9P2E9 1410 aaKnown RBP0.57□□□□□ -2.32
VBP1-202ENST00000460509 A0A1B0GU69 56 aa0.57□□□□□ -2.32
VBP1-202ENST00000460509 KRTAP2-3P0C7H8 128 aa0.57□□□□□ -2.32
VBP1-202ENST00000460509 WFDC2Q14508 124 aa0.57□□□□□ -2.32
VBP1-202ENST00000460509 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
VBP1-202ENST00000460509 LINC00643Q86TS7 51 aa0.57□□□□□ -2.32
VBP1-202ENST00000460509 S100A13Q99584 98 aa0.57□□□□□ -2.32
VBP1-202ENST00000460509 KRTAP2-4Q9BYR9 128 aa0.57□□□□□ -2.32
VBP1-202ENST00000460509 KRTAP2-1Q9BYU5 128 aa0.57□□□□□ -2.32
VBP1-202ENST00000460509 LRRC37AA6NMS7 1700 aa0.57□□□□□ -2.32
VBP1-202ENST00000460509 PKD1L3Q7Z443 1732 aa0.57□□□□□ -2.32
VBP1-202ENST00000460509 SETBP1Q9Y6X0 1596 aa0.57□□□□□ -2.32
VBP1-202ENST00000460509 USP24Q9UPU5 2620 aa0.56□□□□□ -2.32
VBP1-202ENST00000460509 MYH4Q9Y623 1939 aa0.56□□□□□ -2.32
VBP1-202ENST00000460509 KNTC1P50748 2209 aa0.56□□□□□ -2.32
VBP1-202ENST00000460509 ASH1LQ9NR48 2969 aaKnown RBP0.56□□□□□ -2.32
VBP1-202ENST00000460509 JMJD1CQ15652 2540 aa0.56□□□□□ -2.32
VBP1-202ENST00000460509 MYMXA0A1B0GTQ4 84 aa0.56□□□□□ -2.32
VBP1-202ENST00000460509 PRH1P02810 166 aa0.56□□□□□ -2.32
VBP1-202ENST00000460509 GNGT1P63211 74 aa0.56□□□□□ -2.32
VBP1-202ENST00000460509 ST20Q9HBF5 79 aa0.56□□□□□ -2.32
VBP1-202ENST00000460509 MEGF8Q7Z7M0 2845 aa0.56□□□□□ -2.32
VBP1-202ENST00000460509 RGPD1P0DJD0 1748 aa0.55□□□□□ -2.32
VBP1-202ENST00000460509 FRAS1Q86XX4 4008 aa0.55□□□□□ -2.32
VBP1-202ENST00000460509 CEP170BQ9Y4F5 1589 aaPredicted RBP0.55□□□□□ -2.32
VBP1-202ENST00000460509 ACYP1P07311 99 aa0.55□□□□□ -2.32
VBP1-202ENST00000460509 IGLC2P0DOY2 106 aa0.55□□□□□ -2.32
VBP1-202ENST00000460509 IGLC3P0DOY3 106 aa0.55□□□□□ -2.32
VBP1-202ENST00000460509 PLGLAQ15195 96 aa0.55□□□□□ -2.32
VBP1-202ENST00000460509 Q8IZM0 81 aa0.55□□□□□ -2.32
VBP1-202ENST00000460509 LRRC7Q96NW7 1537 aa0.54□□□□□ -2.32
VBP1-202ENST00000460509 PIGYQ3MUY2 71 aa0.54□□□□□ -2.32
VBP1-202ENST00000460509 ABCA8O94911 1581 aa0.53□□□□□ -2.32
VBP1-202ENST00000460509 USP32Q8NFA0 1604 aa0.53□□□□□ -2.32
VBP1-202ENST00000460509 PTPN23Q9H3S7 1636 aa0.53□□□□□ -2.32
VBP1-202ENST00000460509 ZNF831Q5JPB2 1677 aa0.53□□□□□ -2.32
VBP1-202ENST00000460509 QSER1Q2KHR3 1735 aa0.53□□□□□ -2.32
VBP1-202ENST00000460509 LRRIQ1Q96JM4 1722 aa0.53□□□□□ -2.32
VBP1-202ENST00000460509 NAV3Q8IVL0 2385 aa0.53□□□□□ -2.32
VBP1-202ENST00000460509 KANTRA0A1W2PQU2 76 aa0.53□□□□□ -2.32
VBP1-202ENST00000460509 ABCC1P33527 1531 aa0.53□□□□□ -2.33
VBP1-202ENST00000460509 LTN1O94822 1766 aa0.52□□□□□ -2.33
VBP1-202ENST00000460509 K7EQZ3 153 aa0.52□□□□□ -2.33
VBP1-202ENST00000460509 ADIRFQ15847 76 aa0.52□□□□□ -2.33
VBP1-202ENST00000460509 MAGI3Q5TCQ9 1506 aa0.52□□□□□ -2.33
VBP1-202ENST00000460509 PIK3C2BO00750 1634 aa0.52□□□□□ -2.33
VBP1-202ENST00000460509 ZFHX3Q15911 3703 aa0.52□□□□□ -2.33
VBP1-202ENST00000460509 CADP27708 2225 aa0.52□□□□□ -2.33
VBP1-202ENST00000460509 CACNA1CQ13936 2221 aa0.52□□□□□ -2.33
VBP1-202ENST00000460509 AHNAKQ09666 5890 aaKnown RBP0.51□□□□□ -2.33
VBP1-202ENST00000460509 CEBPZOSA8MTT3 80 aa0.51□□□□□ -2.33
VBP1-202ENST00000460509 POLR1AO95602 1720 aaPredicted RBP0.51□□□□□ -2.33
VBP1-202ENST00000460509 NKTRP30414 1462 aaKnown RBP0.51□□□□□ -2.33
VBP1-202ENST00000460509 BVES-AS1Q5T3Y7 98 aa0.51□□□□□ -2.33
VBP1-202ENST00000460509 Q5VSD8 79 aa0.51□□□□□ -2.33
VBP1-202ENST00000460509 PPRC1Q5VV67 1664 aaKnown RBP0.51□□□□□ -2.33
VBP1-202ENST00000460509 CCDC141Q6ZP82 1450 aa0.51□□□□□ -2.33
VBP1-202ENST00000460509 SMR3AQ99954 134 aa0.51□□□□□ -2.33
VBP1-202ENST00000460509 MYO7AQ13402 2215 aa0.5□□□□□ -2.33
VBP1-202ENST00000460509 URB2Q14146 1524 aaKnown RBP0.5□□□□□ -2.33
VBP1-202ENST00000460509 CCDC88BA6NC98 1476 aa0.5□□□□□ -2.33
VBP1-202ENST00000460509 NCOA2Q15596 1464 aa0.5□□□□□ -2.33
VBP1-202ENST00000460509 A0A1B0GUT8 65 aa0.5□□□□□ -2.33
VBP1-202ENST00000460509 RGPD2P0DJD1 1756 aa0.5□□□□□ -2.33
VBP1-202ENST00000460509 H3BUT2 72 aa0.49□□□□□ -2.33
VBP1-202ENST00000460509 DEFB112Q30KQ8 113 aa0.49□□□□□ -2.33
VBP1-202ENST00000460509 SPINK6Q6UWN8 80 aa0.49□□□□□ -2.33
VBP1-202ENST00000460509 ASXL3Q9C0F0 2248 aa0.49□□□□□ -2.33
VBP1-202ENST00000460509 FXYD6-FXYD2A0A087WZ82 144 aa0.48□□□□□ -2.33
VBP1-202ENST00000460509 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
VBP1-202ENST00000460509 COX6B1P14854 86 aa0.48□□□□□ -2.33
VBP1-202ENST00000460509 DEFB121Q5J5C9 76 aa0.48□□□□□ -2.33
VBP1-202ENST00000460509 FAM208BQ5VWN6 2430 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms