RNA–Protein interactions for RNA: ENST00000458450.1

LINC01399-202, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

BASIC

Gene LINC01399, Length 244 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-202ENST00000458450 NRKQ7Z2Y5 1582 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 TRBV7-4A0A0J9YYF1 115 aa-0.38□□□□□ -2.47
LINC01399-202ENST00000458450 LINC00959A0A1B0GUT2 108 aa-0.38□□□□□ -2.47
LINC01399-202ENST00000458450 MGPP08493 103 aa-0.38□□□□□ -2.47
LINC01399-202ENST00000458450 IGLC1P0CG04 106 aa-0.38□□□□□ -2.47
LINC01399-202ENST00000458450 MT4P47944 62 aa-0.38□□□□□ -2.47
LINC01399-202ENST00000458450 TMEM263Q8WUH6 116 aaKnown RBP-0.38□□□□□ -2.47
LINC01399-202ENST00000458450 C1orf54Q8WWF1 131 aa-0.38□□□□□ -2.47
LINC01399-202ENST00000458450 PP6455Q8WZ26 134 aa-0.38□□□□□ -2.47
LINC01399-202ENST00000458450 KTN1Q86UP2 1357 aaKnown RBP-0.38□□□□□ -2.47
LINC01399-202ENST00000458450 ADGRL2O95490 1459 aa-0.38□□□□□ -2.47
LINC01399-202ENST00000458450 POLA1P09884 1462 aaPredicted RBP-0.38□□□□□ -2.47
LINC01399-202ENST00000458450 C1orf167Q5SNV9 1468 aa-0.38□□□□□ -2.47
LINC01399-202ENST00000458450 UBR4Q5T4S7 5183 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 CUBNO60494 3623 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 DMXL1Q9Y485 3027 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 SHPRHQ149N8 1683 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 EIF4G3O43432 1585 aaKnown RBP-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 SPG11Q96JI7 2443 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 UBE2L5PA0A1B0GUS4 154 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 CHKB-CPT1BH3BT56 60 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 IFNGP01579 166 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 HMGN1P05114 100 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 UBE2D3P61077 147 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 UBE2D2P62837 147 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 UBE2L3P68036 154 aaKnown RBP-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 FAM223AQ8IWN6 122 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 FDCSPQ8NFU4 85 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 FAM167A-AS1Q96KT0 104 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 TSC22D3Q99576 134 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 FAM107BQ9H098 131 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 NXT2Q9NPJ8 142 aaKnown RBP-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 APLNQ9ULZ1 77 aa-0.39□□□□□ -2.47
LINC01399-202ENST00000458450 SPTBN4Q9H254 2564 aa-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 SETBP1Q9Y6X0 1596 aa-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 ROCK2O75116 1388 aaKnown RBP-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 HERC2O95714 4834 aa-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 AKAIN1P0CW23 69 aa-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 ATP5EP56381 51 aaPredicted RBP-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 DEFB135Q30KP9 77 aa-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 LCN9Q8WX39 176 aa-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 LINC01600Q96MT4 127 aa-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 DPH3P1Q9H4G8 78 aa-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 TARBP1Q13395 1621 aaKnown RBP-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 SCAPERQ9BY12 1400 aa-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 HECTD1Q9ULT8 2610 aa-0.4□□□□□ -2.47
LINC01399-202ENST00000458450 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.41□□□□□ -2.47
LINC01399-202ENST00000458450 PLEKHH2Q8IVE3 1493 aa-0.41□□□□□ -2.47
LINC01399-202ENST00000458450 LAMA1P25391 3075 aa-0.41□□□□□ -2.47
LINC01399-202ENST00000458450 TEP1Q99973 2627 aaKnown RBP-0.41□□□□□ -2.47
LINC01399-202ENST00000458450 RGPD2P0DJD1 1756 aa-0.41□□□□□ -2.47
LINC01399-202ENST00000458450 COL14A1Q05707 1796 aaKnown RBP-0.41□□□□□ -2.47
LINC01399-202ENST00000458450 MAPKBP1O60336 1514 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 ARHGAP5Q13017 1502 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 USH2AO75445 5202 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 COX8AP10176 69 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 SPRR2AP35326 72 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 Q0VG73 95 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 WHAMMP3Q1A5X7 153 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 KRTAP6-2Q3LI66 62 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 C9orf153Q5TBE3 101 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 FAIMQ9NVQ4 179 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 UQCR10Q9UDW1 63 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 ARL2-SNX15V9GYD0 113 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 USP9YO00507 2555 aaPredicted RBP-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 NLRP1Q9C000 1473 aa-0.41□□□□□ -2.48
LINC01399-202ENST00000458450 CPSF4LA6NMK7 179 aaKnown RBP-0.42□□□□□ -2.48
LINC01399-202ENST00000458450 F6UZH7 168 aa-0.42□□□□□ -2.48
LINC01399-202ENST00000458450 UBA52P62987 128 aaKnown RBP-0.42□□□□□ -2.48
LINC01399-202ENST00000458450 USMG5Q96IX5 58 aa-0.42□□□□□ -2.48
LINC01399-202ENST00000458450 IER3IP1Q9Y5U9 82 aa-0.42□□□□□ -2.48
LINC01399-202ENST00000458450 LRRC37AA6NMS7 1700 aa-0.42□□□□□ -2.48
LINC01399-202ENST00000458450 KNDC1Q76NI1 1749 aa-0.42□□□□□ -2.48
LINC01399-202ENST00000458450 MON2Q7Z3U7 1717 aa-0.42□□□□□ -2.48
LINC01399-202ENST00000458450 PZPP20742 1482 aa-0.42□□□□□ -2.48
LINC01399-202ENST00000458450 ANKRD11Q6UB99 2663 aaPredicted RBP-0.42□□□□□ -2.48
LINC01399-202ENST00000458450 KIF20BQ96Q89 1820 aa-0.43□□□□□ -2.48
LINC01399-202ENST00000458450 DNAH1Q9P2D7 4330 aa-0.43□□□□□ -2.48
LINC01399-202ENST00000458450 APOBP04114 4563 aaKnown RBP-0.43□□□□□ -2.48
LINC01399-202ENST00000458450 FAM223BA6NKX1 122 aa-0.43□□□□□ -2.48
LINC01399-202ENST00000458450 GNG11P61952 73 aa-0.43□□□□□ -2.48
LINC01399-202ENST00000458450 DEFB112Q30KQ8 113 aa-0.43□□□□□ -2.48
LINC01399-202ENST00000458450 PRO1933Q9H354 126 aa-0.43□□□□□ -2.48
LINC01399-202ENST00000458450 PRO1854Q9UHT4 67 aa-0.43□□□□□ -2.48
LINC01399-202ENST00000458450 DSPP15924 2871 aaKnown RBP-0.43□□□□□ -2.48
LINC01399-202ENST00000458450 NKTRP30414 1462 aaKnown RBP-0.43□□□□□ -2.48
LINC01399-202ENST00000458450 SLIT1O75093 1534 aa-0.43□□□□□ -2.48
LINC01399-202ENST00000458450 MUC17Q685J3 4493 aa-0.44□□□□□ -2.48
LINC01399-202ENST00000458450 SONP18583 2426 aaKnown RBP-0.44□□□□□ -2.48
LINC01399-202ENST00000458450 EDC4Q6P2E9 1401 aaKnown RBP-0.44□□□□□ -2.48
LINC01399-202ENST00000458450 A0A1B0GV90 55 aa-0.44□□□□□ -2.48
LINC01399-202ENST00000458450 FAM24AA6NFZ4 105 aa-0.44□□□□□ -2.48
LINC01399-202ENST00000458450 H0YGG7 62 aa-0.44□□□□□ -2.48
LINC01399-202ENST00000458450 DLEU1O43261 78 aa-0.44□□□□□ -2.48
LINC01399-202ENST00000458450 COX6CP09669 75 aa-0.44□□□□□ -2.48
LINC01399-202ENST00000458450 SPRR2EP22531 72 aa-0.44□□□□□ -2.48
LINC01399-202ENST00000458450 RPL13AP3Q6NVV1 102 aa-0.44□□□□□ -2.48
LINC01399-202ENST00000458450 MANBALQ9NQG1 85 aa-0.44□□□□□ -2.48
LINC01399-202ENST00000458450 LINC00846Q9NV44 126 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms