RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 IGKV2D-28P01615 120 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 ATP5G1P05496 136 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 MIAQ16674 131 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 AMMECR1LQ6DCA0 310 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 C15orf56Q8N910 161 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 CDKN2A-AS1Q9UH64 79 aa3.26□□□□□ -1.89
RIF1-207ENST00000454583 C11orf45Q8TAV5 145 aa3.25□□□□□ -1.89
RIF1-207ENST00000454583 OBSCN-AS1Q96MR7 158 aa3.25□□□□□ -1.89
RIF1-207ENST00000454583 A4D1N5 150 aa3.25□□□□□ -1.89
RIF1-207ENST00000454583 IBA57-AS1B1ANH7 110 aa3.25□□□□□ -1.89
RIF1-207ENST00000454583 PRSS1P07477 247 aa3.25□□□□□ -1.89
RIF1-207ENST00000454583 TRAV8-3A0A0A6YYJ7 113 aa3.25□□□□□ -1.89
RIF1-207ENST00000454583 IGHV3-73A0A0B4J1V6 119 aa3.25□□□□□ -1.89
RIF1-207ENST00000454583 WFDC10BQ8IUB3 73 aa3.25□□□□□ -1.89
RIF1-207ENST00000454583 C15orf53Q8NAA6 179 aa3.25□□□□□ -1.89
RIF1-207ENST00000454583 MUC17Q685J3 4493 aa3.24□□□□□ -1.89
RIF1-207ENST00000454583 TRBV30A0A0K0K1B3 111 aa3.24□□□□□ -1.89
RIF1-207ENST00000454583 FAM74A4Q5TZK3 123 aa3.24□□□□□ -1.89
RIF1-207ENST00000454583 OR4C5Q8NGB2 326 aa3.24□□□□□ -1.89
RIF1-207ENST00000454583 HSBP1L1C9JCN9 74 aa3.24□□□□□ -1.89
RIF1-207ENST00000454583 RTL8CO15255 209 aa3.24□□□□□ -1.89
RIF1-207ENST00000454583 CARD19Q96LW7 228 aa3.24□□□□□ -1.89
RIF1-207ENST00000454583 KIAA1109Q2LD37 5005 aa3.24□□□□□ -1.89
RIF1-207ENST00000454583 Q6ZSA8 131 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 ATP6V0E2Q8NHE4 81 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 GVQW2A0A096LPI5 108 aaPredicted RBP3.23□□□□□ -1.89
RIF1-207ENST00000454583 LINC00476Q8WZB0 136 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 DEFB131BA0A096LNP1 70 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 IGHV3-38A0A0C4DH36 116 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 ZNF815PA8K554 130 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 H0Y8G0 127 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 GYPEP15421 78 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 PCP4P48539 62 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 EMP1P54849 157 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 HERVK_113P63121 156 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 WFDC2Q14508 124 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 SS18Q15532 418 aa3.23□□□□□ -1.89
RIF1-207ENST00000454583 LINC00959A0A1B0GUT2 108 aa3.22□□□□□ -1.89
RIF1-207ENST00000454583 A6NDN8 102 aa3.22□□□□□ -1.89
RIF1-207ENST00000454583 C3orf84H3BNL1 204 aa3.22□□□□□ -1.89
RIF1-207ENST00000454583 SMIM13P0DJ93 91 aa3.22□□□□□ -1.89
RIF1-207ENST00000454583 SH2D6Q7Z4S9 175 aa3.22□□□□□ -1.89
RIF1-207ENST00000454583 MUSTN1Q8IVN3 82 aa3.22□□□□□ -1.89
RIF1-207ENST00000454583 DEFB104AQ8WTQ1 72 aa3.22□□□□□ -1.89
RIF1-207ENST00000454583 C2orf82Q6UX34 121 aa3.22□□□□□ -1.89
RIF1-207ENST00000454583 TNFRSF18Q9Y5U5 241 aa3.22□□□□□ -1.89
RIF1-207ENST00000454583 LRP1Q07954 4544 aaKnown RBP3.22□□□□□ -1.89
RIF1-207ENST00000454583 NUPR2A6NF83 97 aa3.22□□□□□ -1.89
RIF1-207ENST00000454583 TCL1BO95988 128 aa3.22□□□□□ -1.89
RIF1-207ENST00000454583 RPL13AP40429 203 aaKnown RBP3.21□□□□□ -1.9
RIF1-207ENST00000454583 DAD1P61803 113 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 OCIAD2Q56VL3 154 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 RNASE13Q5GAN3 156 aaKnown RBP3.21□□□□□ -1.9
RIF1-207ENST00000454583 MUC7Q8TAX7 377 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 LINC00308Q8TCZ7 52 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 F8W1H4 67 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 IFITM1P13164 125 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 COTL1Q14019 142 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 VCX2Q9H322 139 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 ICOSQ9Y6W8 199 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 H3BMG7 143 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 H3BUT2 72 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 SPINK8P0C7L1 97 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 Q8IZM0 81 aa3.21□□□□□ -1.9
RIF1-207ENST00000454583 LCE6AA0A183 80 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 RPL36AP83881 106 aaKnown RBP3.2□□□□□ -1.9
RIF1-207ENST00000454583 RPL36ALQ969Q0 106 aaKnown RBP3.2□□□□□ -1.9
RIF1-207ENST00000454583 C1orf43Q9BWL3 253 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 PAX4O43316 350 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 TLX1NBP0CAT3 122 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 DEFB130BP0DP73 79 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 DEFB130AP0DP74 79 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 CNBPP62633 177 aaKnown RBP3.2□□□□□ -1.9
RIF1-207ENST00000454583 TMEM243Q9BU79 118 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 KLK5Q9Y337 293 aaPredicted RBP3.2□□□□□ -1.9
RIF1-207ENST00000454583 IGHV3-64A0A075B6Q5 118 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 GAGE12JA6NER3 117 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 TRIAP1O43715 76 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 GAGE4Q13068 117 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 GAGE5Q13069 117 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 MRPL23Q16540 153 aaKnown RBP3.2□□□□□ -1.9
RIF1-207ENST00000454583 GAGE13Q4V321 117 aa3.2□□□□□ -1.9
RIF1-207ENST00000454583 NHP2Q9NX24 153 aaKnown RBP3.2□□□□□ -1.9
RIF1-207ENST00000454583 F5H697 171 aa3.19□□□□□ -1.9
RIF1-207ENST00000454583 FAM30AQ9NZY2 134 aa3.19□□□□□ -1.9
RIF1-207ENST00000454583 RPL28P46779 137 aaKnown RBP3.19□□□□□ -1.9
RIF1-207ENST00000454583 HERV-K104P63124 156 aa3.19□□□□□ -1.9
RIF1-207ENST00000454583 KRTAP19-4Q3LI73 84 aa3.19□□□□□ -1.9
RIF1-207ENST00000454583 LINC00337Q8N6G1 96 aa3.19□□□□□ -1.9
RIF1-207ENST00000454583 FAM218AQ96MZ4 157 aa3.19□□□□□ -1.9
RIF1-207ENST00000454583 PRO1854Q9UHT4 67 aa3.19□□□□□ -1.9
RIF1-207ENST00000454583 NDUFA12Q9UI09 145 aa3.19□□□□□ -1.9
RIF1-207ENST00000454583 LST1O00453 97 aa3.18□□□□□ -1.9
RIF1-207ENST00000454583 GCSHP23434 173 aa3.18□□□□□ -1.9
RIF1-207ENST00000454583 BATFQ16520 125 aa3.18□□□□□ -1.9
RIF1-207ENST00000454583 NAA38Q9BRA0 125 aaKnown RBP3.18□□□□□ -1.9
RIF1-207ENST00000454583 NBDYA0A0U1RRE5 68 aa3.18□□□□□ -1.9
RIF1-207ENST00000454583 TMEM238C9JI98 176 aa3.18□□□□□ -1.9
RIF1-207ENST00000454583 NDUFC2O95298 119 aa3.18□□□□□ -1.9
RIF1-207ENST00000454583 HERVK_113P61574 105 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms