RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 LINC00173Q6ZV60 143 aa14.05□□□□□ -0.16
LYSMD2-202ENST00000454181 MRPL55Q7Z7F7 128 aaKnown RBP14.05□□□□□ -0.16
LYSMD2-202ENST00000454181 F8VRH5 84 aa14.04□□□□□ -0.16
LYSMD2-202ENST00000454181 NPSP0C0P6 89 aa14.04□□□□□ -0.16
LYSMD2-202ENST00000454181 HERVK_113P63121 156 aa14.04□□□□□ -0.16
LYSMD2-202ENST00000454181 PAPPA-AS1Q5QFB9 102 aa14.04□□□□□ -0.16
LYSMD2-202ENST00000454181 TYMSOSQ8TAI1 123 aa14.04□□□□□ -0.16
LYSMD2-202ENST00000454181 GEMIN7Q9H840 131 aaKnown RBP14.04□□□□□ -0.16
LYSMD2-202ENST00000454181 TP73-AS1Q9UF72 201 aa14.04□□□□□ -0.16
LYSMD2-202ENST00000454181 BCE1O60756 84 aa14.03□□□□□ -0.16
LYSMD2-202ENST00000454181 K7EMI3 77 aa14.01□□□□□ -0.17
LYSMD2-202ENST00000454181 FAM19A3Q7Z5A8 133 aa14.01□□□□□ -0.17
LYSMD2-202ENST00000454181 CDKN2A-AS1Q9UH64 79 aa14.01□□□□□ -0.17
LYSMD2-202ENST00000454181 A0A087X002 238 aa14□□□□□ -0.17
LYSMD2-202ENST00000454181 IGIPA6NJ69 53 aa14□□□□□ -0.17
LYSMD2-202ENST00000454181 G0S2P27469 103 aa14□□□□□ -0.17
LYSMD2-202ENST00000454181 CXCL5P42830 114 aa14□□□□□ -0.17
LYSMD2-202ENST00000454181 RPL37AP8A6NKH3 93 aa13.97□□□□□ -0.17
LYSMD2-202ENST00000454181 NXT2Q9NPJ8 142 aaKnown RBP13.97□□□□□ -0.17
LYSMD2-202ENST00000454181 LINC00167Q96N53 147 aa13.96□□□□□ -0.17
LYSMD2-202ENST00000454181 GAGE10A6NGK3 116 aa13.94□□□□□ -0.18
LYSMD2-202ENST00000454181 MT-ND4LP03901 98 aa13.94□□□□□ -0.18
LYSMD2-202ENST00000454181 UBE2AP49459 152 aa13.93□□□□□ -0.18
LYSMD2-202ENST00000454181 ANAPC16Q96DE5 110 aa13.93□□□□□ -0.18
LYSMD2-202ENST00000454181 TIMM17AQ99595 171 aa13.93□□□□□ -0.18
LYSMD2-202ENST00000454181 KRTAP9-2Q9BYQ4 174 aa13.92□□□□□ -0.18
LYSMD2-202ENST00000454181 PNRC1Q12796 327 aaPredicted RBP13.91□□□□□ -0.18
LYSMD2-202ENST00000454181 NKAPP1Q8N9T2 125 aa13.91□□□□□ -0.18
LYSMD2-202ENST00000454181 COX7B2Q8TF08 81 aa13.91□□□□□ -0.18
LYSMD2-202ENST00000454181 ANAPC11Q9NYG5 84 aa13.91□□□□□ -0.18
LYSMD2-202ENST00000454181 PDZD11Q5EBL8 140 aa13.9□□□□□ -0.18
LYSMD2-202ENST00000454181 RAB5BP61020 215 aa13.89□□□□□ -0.19
LYSMD2-202ENST00000454181 TOMM6Q96B49 74 aa13.89□□□□□ -0.19
LYSMD2-202ENST00000454181 SCGB3A1Q96QR1 104 aa13.89□□□□□ -0.19
LYSMD2-202ENST00000454181 SMIM1B2RUZ4 78 aa13.88□□□□□ -0.19
LYSMD2-202ENST00000454181 ERASQ7Z444 233 aa13.87□□□□□ -0.19
LYSMD2-202ENST00000454181 LINC00304Q8N9R0 145 aa13.87□□□□□ -0.19
LYSMD2-202ENST00000454181 RETNLBQ9BQ08 111 aa13.87□□□□□ -0.19
LYSMD2-202ENST00000454181 TINCRA0A1B0GVN0 87 aa13.86□□□□□ -0.19
LYSMD2-202ENST00000454181 FAM229BQ4G0N7 80 aa13.86□□□□□ -0.19
LYSMD2-202ENST00000454181 CDIP1Q9H305 208 aa13.86□□□□□ -0.19
LYSMD2-202ENST00000454181 IGKV2D-26A0A0A0MRZ7 120 aa13.85□□□□□ -0.19
LYSMD2-202ENST00000454181 IGLV5-37A0A075B6J1 123 aa13.84□□□□□ -0.19
LYSMD2-202ENST00000454181 KRTAP13-2Q52LG2 175 aa13.84□□□□□ -0.19
LYSMD2-202ENST00000454181 KRTAP13-1Q8IUC0 172 aa13.82□□□□□ -0.2
LYSMD2-202ENST00000454181 IGKV2-28A0A075B6P5 120 aa13.81□□□□□ -0.2
LYSMD2-202ENST00000454181 ATP5LO75964 103 aa13.81□□□□□ -0.2
LYSMD2-202ENST00000454181 IGKV2D-28P01615 120 aa13.81□□□□□ -0.2
LYSMD2-202ENST00000454181 SPINK8P0C7L1 97 aa13.81□□□□□ -0.2
LYSMD2-202ENST00000454181 LINC01549A6NIU2 74 aa13.8□□□□□ -0.2
LYSMD2-202ENST00000454181 KIAA1644Q3SXP7 199 aa13.8□□□□□ -0.2
LYSMD2-202ENST00000454181 IGLV7-46A0A075B6I9 117 aa13.79□□□□□ -0.2
LYSMD2-202ENST00000454181 IGLV5-45A0A087WSX0 123 aa13.79□□□□□ -0.2
LYSMD2-202ENST00000454181 A0A1B0GVG6 124 aa13.79□□□□□ -0.2
LYSMD2-202ENST00000454181 ADCYAP1P18509 176 aa13.79□□□□□ -0.2
LYSMD2-202ENST00000454181 LCE2AQ5TA79 106 aaPredicted RBP13.79□□□□□ -0.2
LYSMD2-202ENST00000454181 KRTAP3-3Q9BYR6 98 aa13.78□□□□□ -0.2
LYSMD2-202ENST00000454181 KRTAP3-2Q9BYR7 98 aa13.78□□□□□ -0.2
LYSMD2-202ENST00000454181 MRPL18Q9H0U6 180 aaKnown RBP13.78□□□□□ -0.2
LYSMD2-202ENST00000454181 CST9LQ9H4G1 147 aa13.78□□□□□ -0.2
LYSMD2-202ENST00000454181 H3BRM9 83 aa13.77□□□□□ -0.21
LYSMD2-202ENST00000454181 TPRXLQ17RH7 258 aa13.77□□□□□ -0.21
LYSMD2-202ENST00000454181 SCO1O75880 301 aa13.76□□□□□ -0.21
LYSMD2-202ENST00000454181 PFN2P35080 140 aa13.76□□□□□ -0.21
LYSMD2-202ENST00000454181 PRLHP81277 87 aa13.76□□□□□ -0.21
LYSMD2-202ENST00000454181 PMVKQ15126 192 aa13.76□□□□□ -0.21
LYSMD2-202ENST00000454181 FAM19A1Q7Z5A9 133 aa13.76□□□□□ -0.21
LYSMD2-202ENST00000454181 CTAG1AP78358 180 aa13.75□□□□□ -0.21
LYSMD2-202ENST00000454181 RAB14P61106 215 aa13.74□□□□□ -0.21
LYSMD2-202ENST00000454181 RPL24P83731 157 aaKnown RBP13.73□□□□□ -0.21
LYSMD2-202ENST00000454181 FAT4Q6V0I7 4981 aa13.72□□□□□ -0.21
LYSMD2-202ENST00000454181 TMEM126AQ9H061 195 aa13.72□□□□□ -0.21
LYSMD2-202ENST00000454181 TMEM238C9JI98 176 aa13.7□□□□□ -0.22
LYSMD2-202ENST00000454181 FA2HQ7L5A8 372 aa13.69□□□□□ -0.22
LYSMD2-202ENST00000454181 SND1-IT1Q9HBX3 110 aa13.69□□□□□ -0.22
LYSMD2-202ENST00000454181 SMCO4Q9NRQ5 59 aa13.69□□□□□ -0.22
LYSMD2-202ENST00000454181 VPREB1P12018 145 aa13.68□□□□□ -0.22
LYSMD2-202ENST00000454181 CBLN2Q8IUK8 224 aa13.68□□□□□ -0.22
LYSMD2-202ENST00000454181 PPDPFQ9H3Y8 114 aa13.68□□□□□ -0.22
LYSMD2-202ENST00000454181 TRAV9-1A0A075B6T8 112 aa13.67□□□□□ -0.22
LYSMD2-202ENST00000454181 LINC01546A6NGU7 62 aa13.67□□□□□ -0.22
LYSMD2-202ENST00000454181 ERG28Q9UKR5 140 aa13.67□□□□□ -0.22
LYSMD2-202ENST00000454181 NDUFA6P56556 154 aa13.66□□□□□ -0.22
LYSMD2-202ENST00000454181 PLEKHB2Q96CS7 222 aa13.66□□□□□ -0.22
LYSMD2-202ENST00000454181 GNB1LQ9BYB4 327 aa13.66□□□□□ -0.22
LYSMD2-202ENST00000454181 COX17Q14061 63 aa13.65□□□□□ -0.22
LYSMD2-202ENST00000454181 SPAG11AQ6PDA7 123 aa13.65□□□□□ -0.22
LYSMD2-202ENST00000454181 M0R378 163 aa13.64□□□□□ -0.23
LYSMD2-202ENST00000454181 S100PP25815 95 aa13.64□□□□□ -0.23
LYSMD2-202ENST00000454181 C3orf22Q8N5N4 141 aa13.64□□□□□ -0.23
LYSMD2-202ENST00000454181 HIGD2AQ9BW72 106 aa13.64□□□□□ -0.23
LYSMD2-202ENST00000454181 IGLV5-39A0A0G2JS06 123 aa13.63□□□□□ -0.23
LYSMD2-202ENST00000454181 IGLC3P0DOY3 106 aa13.63□□□□□ -0.23
LYSMD2-202ENST00000454181 C4orf48Q5BLP8 95 aa13.63□□□□□ -0.23
LYSMD2-202ENST00000454181 ZNF625Q96I27 306 aaPredicted RBP13.62□□□□□ -0.23
LYSMD2-202ENST00000454181 KRTAP9-6A0A140TA67 174 aa13.61□□□□□ -0.23
LYSMD2-202ENST00000454181 MUC17Q685J3 4493 aa13.6□□□□□ -0.23
LYSMD2-202ENST00000454181 ZNF22P17026 224 aaPredicted RBP13.59□□□□□ -0.23
LYSMD2-202ENST00000454181 SFTA2Q6UW10 78 aa13.59□□□□□ -0.23
LYSMD2-202ENST00000454181 LINC00337Q8N6G1 96 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms