RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 CLEC2BQ92478 149 aa12.49□□□□□ -0.41
MECP2-205ENST00000453960 TOMM7Q9P0U1 55 aa12.49□□□□□ -0.41
MECP2-205ENST00000453960 TRAV13-2A0A0B4J235 113 aa12.48□□□□□ -0.41
MECP2-205ENST00000453960 C21orf62-AS1Q17RA5 79 aa12.48□□□□□ -0.41
MECP2-205ENST00000453960 CD164L2Q6UWJ8 174 aa12.48□□□□□ -0.41
MECP2-205ENST00000453960 FBN3Q75N90 2809 aa12.47□□□□□ -0.41
MECP2-205ENST00000453960 IGKV2-28A0A075B6P5 120 aa12.47□□□□□ -0.41
MECP2-205ENST00000453960 A0A096LPF7 62 aa12.47□□□□□ -0.41
MECP2-205ENST00000453960 IGKV2D-28P01615 120 aa12.47□□□□□ -0.41
MECP2-205ENST00000453960 MRPL23Q16540 153 aaKnown RBP12.47□□□□□ -0.41
MECP2-205ENST00000453960 DNAH3Q8TD57 4116 aa12.47□□□□□ -0.41
MECP2-205ENST00000453960 RPL28P46779 137 aaKnown RBP12.46□□□□□ -0.41
MECP2-205ENST00000453960 XCL1P47992 114 aa12.46□□□□□ -0.41
MECP2-205ENST00000453960 CCL18P55774 89 aa12.46□□□□□ -0.41
MECP2-205ENST00000453960 KIAA0087Q14695 138 aa12.45□□□□□ -0.42
MECP2-205ENST00000453960 LELP1Q5T871 98 aa12.45□□□□□ -0.42
MECP2-205ENST00000453960 NTN5Q8WTR8 489 aaPredicted RBP12.45□□□□□ -0.42
MECP2-205ENST00000453960 EGFEM1PQ0D2K5 195 aa12.45□□□□□ -0.42
MECP2-205ENST00000453960 DEFB121Q5J5C9 76 aa12.45□□□□□ -0.42
MECP2-205ENST00000453960 C2orf82Q6UX34 121 aa12.45□□□□□ -0.42
MECP2-205ENST00000453960 LINC00337Q8N6G1 96 aa12.45□□□□□ -0.42
MECP2-205ENST00000453960 MDFIQ99750 246 aa12.45□□□□□ -0.42
MECP2-205ENST00000453960 SND1-IT1Q9HBX3 110 aa12.45□□□□□ -0.42
MECP2-205ENST00000453960 LINC00158P58513 81 aa12.44□□□□□ -0.42
MECP2-205ENST00000453960 LINC00269Q8N2A0 174 aa12.44□□□□□ -0.42
MECP2-205ENST00000453960 TRACP01848 142 aa12.43□□□□□ -0.42
MECP2-205ENST00000453960 C6orf226Q5I0X4 101 aa12.43□□□□□ -0.42
MECP2-205ENST00000453960 REG3AQ06141 175 aa12.42□□□□□ -0.42
MECP2-205ENST00000453960 CRPP02741 224 aa12.42□□□□□ -0.42
MECP2-205ENST00000453960 CXCL5P42830 114 aa12.42□□□□□ -0.42
MECP2-205ENST00000453960 CHCHD10Q8WYQ3 142 aaPredicted RBP12.42□□□□□ -0.42
MECP2-205ENST00000453960 FBN1P35555 2871 aaKnown RBP12.41□□□□□ -0.42
MECP2-205ENST00000453960 H3BNG1 76 aa12.41□□□□□ -0.42
MECP2-205ENST00000453960 UBE2WQ96B02 151 aa12.41□□□□□ -0.42
MECP2-205ENST00000453960 PRR34Q9NV39 138 aa12.41□□□□□ -0.42
MECP2-205ENST00000453960 KRTAP10-11P60412 298 aa12.4□□□□□ -0.42
MECP2-205ENST00000453960 CLPSL2Q6UWE3 100 aa12.4□□□□□ -0.42
MECP2-205ENST00000453960 COX17Q14061 63 aa12.4□□□□□ -0.43
MECP2-205ENST00000453960 Q8N3U1 123 aa12.4□□□□□ -0.43
MECP2-205ENST00000453960 TEX49A0A1B0GTD5 131 aa12.39□□□□□ -0.43
MECP2-205ENST00000453960 ANGP03950 147 aaKnown RBP12.39□□□□□ -0.43
MECP2-205ENST00000453960 KRTAP24-1Q3LI83 254 aa12.39□□□□□ -0.43
MECP2-205ENST00000453960 OXLD1Q5BKU9 147 aa12.37□□□□□ -0.43
MECP2-205ENST00000453960 PFN2P35080 140 aa12.37□□□□□ -0.43
MECP2-205ENST00000453960 KLK5Q9Y337 293 aaPredicted RBP12.37□□□□□ -0.43
MECP2-205ENST00000453960 FAM218AQ96MZ4 157 aa12.36□□□□□ -0.43
MECP2-205ENST00000453960 C11orf68Q9H3H3 251 aaKnown RBP12.36□□□□□ -0.43
MECP2-205ENST00000453960 COL6A5A8TX70 2615 aa12.36□□□□□ -0.43
MECP2-205ENST00000453960 XGP55808 180 aa12.35□□□□□ -0.43
MECP2-205ENST00000453960 SMIM11BQ8TCY0 68 aa12.35□□□□□ -0.43
MECP2-205ENST00000453960 NDUFC2O95298 119 aa12.34□□□□□ -0.43
MECP2-205ENST00000453960 LYPD5Q6UWN5 251 aa12.34□□□□□ -0.43
MECP2-205ENST00000453960 MUC7Q8TAX7 377 aa12.34□□□□□ -0.43
MECP2-205ENST00000453960 FAM240AA0A1B0GVK7 77 aa12.34□□□□□ -0.43
MECP2-205ENST00000453960 C22orf24Q9Y442 160 aa12.34□□□□□ -0.43
MECP2-205ENST00000453960 H0YGX0 51 aa12.33□□□□□ -0.44
MECP2-205ENST00000453960 HTN3P15516 51 aa12.33□□□□□ -0.44
MECP2-205ENST00000453960 CKS1BP61024 79 aa12.33□□□□□ -0.44
MECP2-205ENST00000453960 ANK2Q01484 3957 aa12.33□□□□□ -0.44
MECP2-205ENST00000453960 CFAP161Q6P656 301 aa12.32□□□□□ -0.44
MECP2-205ENST00000453960 MT-ATP8P03928 68 aa12.31□□□□□ -0.44
MECP2-205ENST00000453960 STAB1Q9NY15 2570 aa12.31□□□□□ -0.44
MECP2-205ENST00000453960 IGLV10-54A0A075B6I4 117 aa12.31□□□□□ -0.44
MECP2-205ENST00000453960 TRAV8-4A0A0B4J246 113 aa12.31□□□□□ -0.44
MECP2-205ENST00000453960 ENHOQ6UWT2 76 aa12.31□□□□□ -0.44
MECP2-205ENST00000453960 A0A0J9YWU9 116 aa12.3□□□□□ -0.44
MECP2-205ENST00000453960 MALP21145 153 aa12.3□□□□□ -0.44
MECP2-205ENST00000453960 RETNQ9HD89 108 aa12.28□□□□□ -0.44
MECP2-205ENST00000453960 GVQW2A0A096LPI5 108 aaPredicted RBP12.27□□□□□ -0.45
MECP2-205ENST00000453960 BAALC-AS2P0C853 105 aa12.27□□□□□ -0.45
MECP2-205ENST00000453960 NANOS2P60321 138 aaKnown RBP12.27□□□□□ -0.45
MECP2-205ENST00000453960 KPRPQ5T749 579 aaPredicted RBP12.27□□□□□ -0.45
MECP2-205ENST00000453960 KLK12Q9UKR0 248 aa12.27□□□□□ -0.45
MECP2-205ENST00000453960 C3orf56Q8N813 242 aa12.25□□□□□ -0.45
MECP2-205ENST00000453960 SPAG11BQ08648 103 aa12.25□□□□□ -0.45
MECP2-205ENST00000453960 KRTAP26-1Q6PEX3 210 aa12.24□□□□□ -0.45
MECP2-205ENST00000453960 Q6ZTC4 211 aa12.24□□□□□ -0.45
MECP2-205ENST00000453960 PKD1L1Q8TDX9 2849 aa12.24□□□□□ -0.45
MECP2-205ENST00000453960 A0A087WYN8 130 aa12.23□□□□□ -0.45
MECP2-205ENST00000453960 A0A1B0GX51 115 aa12.23□□□□□ -0.45
MECP2-205ENST00000453960 C10orf25Q5T742 122 aa12.23□□□□□ -0.45
MECP2-205ENST00000453960 LINC00167Q96N53 147 aa12.23□□□□□ -0.45
MECP2-205ENST00000453960 ACYP1P07311 99 aa12.22□□□□□ -0.45
MECP2-205ENST00000453960 C9orf116Q5BN46 136 aaPredicted RBP12.22□□□□□ -0.45
MECP2-205ENST00000453960 UNQ6190/PRO20217Q6UXQ8 127 aa12.21□□□□□ -0.45
MECP2-205ENST00000453960 OR13C6PQ8NH95 151 aa12.21□□□□□ -0.45
MECP2-205ENST00000453960 TMEM126AQ9H061 195 aa12.21□□□□□ -0.45
MECP2-205ENST00000453960 Q6Q795 121 aa12.2□□□□□ -0.46
MECP2-205ENST00000453960 WFDC10BQ8IUB3 73 aa12.2□□□□□ -0.46
MECP2-205ENST00000453960 C6orf223Q8N319 242 aa12.2□□□□□ -0.46
MECP2-205ENST00000453960 OBSCN-AS1Q96MR7 158 aa12.2□□□□□ -0.46
MECP2-205ENST00000453960 SDIM1Q6ZPB5 146 aa12.2□□□□□ -0.46
MECP2-205ENST00000453960 Q8NDZ9 215 aa12.2□□□□□ -0.46
MECP2-205ENST00000453960 Q9HAA7 133 aa12.2□□□□□ -0.46
MECP2-205ENST00000453960 TENM3Q9P273 2699 aa12.19□□□□□ -0.46
MECP2-205ENST00000453960 INAFM2P0DMQ5 153 aa12.18□□□□□ -0.46
MECP2-205ENST00000453960 DNAL4O96015 105 aa12.17□□□□□ -0.46
MECP2-205ENST00000453960 ESRGQ1W209 222 aa12.17□□□□□ -0.46
MECP2-205ENST00000453960 PRR3P79522 188 aaKnown RBP12.17□□□□□ -0.46
MECP2-205ENST00000453960 C15orf53Q8NAA6 179 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms