RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 TM2D2Q9BX73 214 aa9.35□□□□□ -0.91
SHMT2-203ENST00000449049 HIGD1BQ9P298 99 aa9.35□□□□□ -0.91
SHMT2-203ENST00000449049 J3QR89 54 aa9.34□□□□□ -0.91
SHMT2-203ENST00000449049 A0A087WZ39 114 aa9.34□□□□□ -0.91
SHMT2-203ENST00000449049 NMUP48645 174 aa9.34□□□□□ -0.91
SHMT2-203ENST00000449049 RPL24P83731 157 aaKnown RBP9.34□□□□□ -0.91
SHMT2-203ENST00000449049 DNAH6Q9C0G6 4158 aa9.33□□□□□ -0.92
SHMT2-203ENST00000449049 COX7A2LO14548 114 aa9.33□□□□□ -0.92
SHMT2-203ENST00000449049 TMEM170BQ5T4T1 132 aa9.33□□□□□ -0.92
SHMT2-203ENST00000449049 C5orf38Q86SI9 138 aa9.33□□□□□ -0.92
SHMT2-203ENST00000449049 LINC01561Q8N1V8 128 aa9.33□□□□□ -0.92
SHMT2-203ENST00000449049 MAPKAPK5-AS1Q8N8E1 139 aa9.33□□□□□ -0.92
SHMT2-203ENST00000449049 HERV-K104P63124 156 aa9.32□□□□□ -0.92
SHMT2-203ENST00000449049 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
SHMT2-203ENST00000449049 SS18L2Q9UHA2 77 aa9.32□□□□□ -0.92
SHMT2-203ENST00000449049 HYDINQ4G0P3 5121 aa9.31□□□□□ -0.92
SHMT2-203ENST00000449049 TMEM223A0PJW6 202 aa9.31□□□□□ -0.92
SHMT2-203ENST00000449049 FXYD2P54710 66 aa9.31□□□□□ -0.92
SHMT2-203ENST00000449049 SMIM1B2RUZ4 78 aa9.3□□□□□ -0.92
SHMT2-203ENST00000449049 PSCAO43653 123 aa9.3□□□□□ -0.92
SHMT2-203ENST00000449049 GCSHP23434 173 aa9.3□□□□□ -0.92
SHMT2-203ENST00000449049 KMT2AQ03164 3969 aa9.3□□□□□ -0.92
SHMT2-203ENST00000449049 SACSQ9NZJ4 4579 aa9.3□□□□□ -0.92
SHMT2-203ENST00000449049 SPINK8P0C7L1 97 aa9.29□□□□□ -0.92
SHMT2-203ENST00000449049 MALP21145 153 aa9.29□□□□□ -0.92
SHMT2-203ENST00000449049 F8W1H4 67 aa9.29□□□□□ -0.92
SHMT2-203ENST00000449049 IGHV3-64A0A075B6Q5 118 aa9.28□□□□□ -0.92
SHMT2-203ENST00000449049 IGKV2D-26A0A0A0MRZ7 120 aa9.28□□□□□ -0.92
SHMT2-203ENST00000449049 IGHV1-58A0A0C4DH39 117 aa9.28□□□□□ -0.92
SHMT2-203ENST00000449049 APOMO95445 188 aa9.28□□□□□ -0.92
SHMT2-203ENST00000449049 IGLV5-39A0A0G2JS06 123 aa9.28□□□□□ -0.92
SHMT2-203ENST00000449049 E9PLD3 99 aa9.28□□□□□ -0.92
SHMT2-203ENST00000449049 CEND1Q8N111 149 aa9.28□□□□□ -0.92
SHMT2-203ENST00000449049 C15orf56Q8N910 161 aa9.28□□□□□ -0.92
SHMT2-203ENST00000449049 HERVK_113P61574 105 aa9.27□□□□□ -0.93
SHMT2-203ENST00000449049 SPANXB1Q9NS25 103 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-203ENST00000449049 ERG28Q9UKR5 140 aa9.27□□□□□ -0.93
SHMT2-203ENST00000449049 LRCOL1A6NCL2 159 aa9.26□□□□□ -0.93
SHMT2-203ENST00000449049 USP17L23D6RBM5 183 aa9.26□□□□□ -0.93
SHMT2-203ENST00000449049 RTL8CO15255 209 aa9.26□□□□□ -0.93
SHMT2-203ENST00000449049 GVQW2A0A096LPI5 108 aaPredicted RBP9.25□□□□□ -0.93
SHMT2-203ENST00000449049 K7ERJ3 54 aa9.25□□□□□ -0.93
SHMT2-203ENST00000449049 WFDC2Q14508 124 aa9.25□□□□□ -0.93
SHMT2-203ENST00000449049 TAL2Q16559 108 aa9.25□□□□□ -0.93
SHMT2-203ENST00000449049 TTTY13Q9BZ97 58 aa9.25□□□□□ -0.93
SHMT2-203ENST00000449049 NHP2Q9NX24 153 aaKnown RBP9.25□□□□□ -0.93
SHMT2-203ENST00000449049 LEPROTO15243 131 aa9.24□□□□□ -0.93
SHMT2-203ENST00000449049 KIAA0087Q14695 138 aa9.24□□□□□ -0.93
SHMT2-203ENST00000449049 Q8IZM0 81 aa9.24□□□□□ -0.93
SHMT2-203ENST00000449049 LECT2O14960 151 aa9.23□□□□□ -0.93
SHMT2-203ENST00000449049 SPAG11BQ08648 103 aa9.23□□□□□ -0.93
SHMT2-203ENST00000449049 COX7B2Q8TF08 81 aa9.23□□□□□ -0.93
SHMT2-203ENST00000449049 HIGD2BQ4VC39 106 aa9.23□□□□□ -0.93
SHMT2-203ENST00000449049 PLEKHB2Q96CS7 222 aa9.23□□□□□ -0.93
SHMT2-203ENST00000449049 DNAH10Q8IVF4 4471 aa9.23□□□□□ -0.93
SHMT2-203ENST00000449049 RYR2Q92736 4967 aa9.23□□□□□ -0.93
SHMT2-203ENST00000449049 KMT2CQ8NEZ4 4911 aaKnown RBP9.23□□□□□ -0.93
SHMT2-203ENST00000449049 TOMM7Q9P0U1 55 aa9.22□□□□□ -0.93
SHMT2-203ENST00000449049 DNAH2Q9P225 4427 aa9.22□□□□□ -0.93
SHMT2-203ENST00000449049 A0A087WTM6 91 aa9.22□□□□□ -0.93
SHMT2-203ENST00000449049 TSPEAR-AS2P59090 65 aa9.22□□□□□ -0.93
SHMT2-203ENST00000449049 C14orf177Q52M58 125 aa9.22□□□□□ -0.93
SHMT2-203ENST00000449049 J3QQQ9 107 aa9.21□□□□□ -0.94
SHMT2-203ENST00000449049 ZNF561-AS1K7EIQ3 104 aa9.21□□□□□ -0.94
SHMT2-203ENST00000449049 PRSS2P07478 247 aa9.21□□□□□ -0.94
SHMT2-203ENST00000449049 NTN5Q8WTR8 489 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-203ENST00000449049 TNP2Q05952 138 aa9.2□□□□□ -0.94
SHMT2-203ENST00000449049 C2orf48Q96LS8 159 aa9.2□□□□□ -0.94
SHMT2-203ENST00000449049 H3BMG7 143 aa9.2□□□□□ -0.94
SHMT2-203ENST00000449049 C6orf226Q5I0X4 101 aa9.2□□□□□ -0.94
SHMT2-203ENST00000449049 LINC00526Q96FQ7 95 aa9.2□□□□□ -0.94
SHMT2-203ENST00000449049 PRO0461Q9UI25 63 aa9.2□□□□□ -0.94
SHMT2-203ENST00000449049 F8WDY8 70 aa9.19□□□□□ -0.94
SHMT2-203ENST00000449049 CXCL5P42830 114 aa9.19□□□□□ -0.94
SHMT2-203ENST00000449049 ETDBQ3ZM63 59 aa9.19□□□□□ -0.94
SHMT2-203ENST00000449049 SMIM20Q8N5G0 67 aa9.19□□□□□ -0.94
SHMT2-203ENST00000449049 Q8N814 137 aa9.19□□□□□ -0.94
SHMT2-203ENST00000449049 A0A1B0GWB2 263 aa9.19□□□□□ -0.94
SHMT2-203ENST00000449049 LGALS3P17931 250 aaKnown RBP9.19□□□□□ -0.94
SHMT2-203ENST00000449049 ZNF625Q96I27 306 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-203ENST00000449049 ANAPC13Q9BS18 74 aa9.18□□□□□ -0.94
SHMT2-203ENST00000449049 B5MCH6 92 aa9.17□□□□□ -0.94
SHMT2-203ENST00000449049 C2orf82Q6UX34 121 aa9.17□□□□□ -0.94
SHMT2-203ENST00000449049 DNAH17Q9UFH2 4485 aa9.17□□□□□ -0.94
SHMT2-203ENST00000449049 NDUFA1O15239 70 aa9.17□□□□□ -0.94
SHMT2-203ENST00000449049 SLPIP03973 132 aa9.17□□□□□ -0.94
SHMT2-203ENST00000449049 SFTA2Q6UW10 78 aa9.17□□□□□ -0.94
SHMT2-203ENST00000449049 CAMK2N2Q96S95 79 aa9.17□□□□□ -0.94
SHMT2-203ENST00000449049 NDUFA12Q9UI09 145 aa9.17□□□□□ -0.94
SHMT2-203ENST00000449049 LINC00336Q6ZUF6 198 aa9.16□□□□□ -0.94
SHMT2-203ENST00000449049 HIST1H4GQ99525 98 aa9.16□□□□□ -0.94
SHMT2-203ENST00000449049 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
SHMT2-203ENST00000449049 MYMXA0A1B0GTQ4 84 aa9.15□□□□□ -0.94
SHMT2-203ENST00000449049 SYCNQ0VAF6 134 aa9.15□□□□□ -0.94
SHMT2-203ENST00000449049 C10orf25Q5T742 122 aa9.15□□□□□ -0.94
SHMT2-203ENST00000449049 UNQ6190/PRO20217Q6UXQ8 127 aa9.15□□□□□ -0.94
SHMT2-203ENST00000449049 CDIP1Q9H305 208 aa9.15□□□□□ -0.94
SHMT2-203ENST00000449049 FRAS1Q86XX4 4008 aa9.15□□□□□ -0.95
SHMT2-203ENST00000449049 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-203ENST00000449049 Q6ZRU5 148 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 216.2 ms