RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 AKR1D1P51857 326 aa11.67□□□□□ -0.54
TRAPPC4-203ENST00000447216 CNBPP62633 177 aaKnown RBP11.67□□□□□ -0.54
TRAPPC4-203ENST00000447216 LEPROTO15243 131 aa11.66□□□□□ -0.54
TRAPPC4-203ENST00000447216 TSPEAR-AS2P59090 65 aa11.66□□□□□ -0.54
TRAPPC4-203ENST00000447216 CKS1BP61024 79 aa11.66□□□□□ -0.54
TRAPPC4-203ENST00000447216 MAJINQ3KP22 176 aa11.66□□□□□ -0.54
TRAPPC4-203ENST00000447216 CARD19Q96LW7 228 aa11.66□□□□□ -0.54
TRAPPC4-203ENST00000447216 NDUFA1O15239 70 aa11.65□□□□□ -0.54
TRAPPC4-203ENST00000447216 JOSD1Q15040 202 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-203ENST00000447216 ANKRD39Q53RE8 183 aa11.65□□□□□ -0.54
TRAPPC4-203ENST00000447216 PGPEP1Q9NXJ5 209 aa11.65□□□□□ -0.54
TRAPPC4-203ENST00000447216 PKHD1P08F94 4074 aa11.65□□□□□ -0.55
TRAPPC4-203ENST00000447216 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-203ENST00000447216 E9PLD3 99 aa11.64□□□□□ -0.55
TRAPPC4-203ENST00000447216 PLEKHB2Q96CS7 222 aa11.64□□□□□ -0.55
TRAPPC4-203ENST00000447216 IGKV2D-26A0A0A0MRZ7 120 aa11.63□□□□□ -0.55
TRAPPC4-203ENST00000447216 F8WDY8 70 aa11.63□□□□□ -0.55
TRAPPC4-203ENST00000447216 C6orf48Q9UBA6 75 aa11.63□□□□□ -0.55
TRAPPC4-203ENST00000447216 DYNC1H1Q14204 4646 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-203ENST00000447216 J3QQQ9 107 aa11.62□□□□□ -0.55
TRAPPC4-203ENST00000447216 CXCL5P42830 114 aa11.62□□□□□ -0.55
TRAPPC4-203ENST00000447216 PYY3Q5JQD4 70 aa11.62□□□□□ -0.55
TRAPPC4-203ENST00000447216 C9orf163Q8N9P6 203 aa11.62□□□□□ -0.55
TRAPPC4-203ENST00000447216 C9orf116Q5BN46 136 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC4-203ENST00000447216 CDPF1Q6NVV7 123 aa11.61□□□□□ -0.55
TRAPPC4-203ENST00000447216 LGALS3P17931 250 aaKnown RBP11.6□□□□□ -0.55
TRAPPC4-203ENST00000447216 ZNF625Q96I27 306 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC4-203ENST00000447216 NDUFA12Q9UI09 145 aa11.6□□□□□ -0.55
TRAPPC4-203ENST00000447216 LOC105371267A0A1B0GV96 52 aa11.59□□□□□ -0.55
TRAPPC4-203ENST00000447216 C16orf90A8MZG2 172 aa11.59□□□□□ -0.55
TRAPPC4-203ENST00000447216 GCSHP23434 173 aa11.59□□□□□ -0.55
TRAPPC4-203ENST00000447216 TTTY13Q9BZ97 58 aa11.59□□□□□ -0.55
TRAPPC4-203ENST00000447216 TRBV30A0A0K0K1B3 111 aa11.58□□□□□ -0.56
TRAPPC4-203ENST00000447216 HSBP1L1C9JCN9 74 aa11.58□□□□□ -0.56
TRAPPC4-203ENST00000447216 NMUP48645 174 aa11.58□□□□□ -0.56
TRAPPC4-203ENST00000447216 KRTAP10-1P60331 282 aa11.58□□□□□ -0.56
TRAPPC4-203ENST00000447216 RNF151Q2KHN1 245 aa11.58□□□□□ -0.56
TRAPPC4-203ENST00000447216 A6NJY4 79 aa11.57□□□□□ -0.56
TRAPPC4-203ENST00000447216 EPPK1P58107 5090 aaKnown RBP11.57□□□□□ -0.56
TRAPPC4-203ENST00000447216 DNAH8Q96JB1 4490 aa11.56□□□□□ -0.56
TRAPPC4-203ENST00000447216 MYMXA0A1B0GTQ4 84 aa11.56□□□□□ -0.56
TRAPPC4-203ENST00000447216 LRP1BQ9NZR2 4599 aa11.55□□□□□ -0.56
TRAPPC4-203ENST00000447216 SDIM1Q6ZPB5 146 aa11.55□□□□□ -0.56
TRAPPC4-203ENST00000447216 LOC107984640A0A0U1RRK4 108 aa11.54□□□□□ -0.56
TRAPPC4-203ENST00000447216 RPL18AQ02543 176 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-203ENST00000447216 PCP2Q8IVA1 136 aa11.54□□□□□ -0.56
TRAPPC4-203ENST00000447216 VAMP8Q9BV40 100 aa11.54□□□□□ -0.56
TRAPPC4-203ENST00000447216 PAM16Q9Y3D7 125 aa11.54□□□□□ -0.56
TRAPPC4-203ENST00000447216 ZNF815PA8K554 130 aa11.53□□□□□ -0.56
TRAPPC4-203ENST00000447216 PFN2P35080 140 aa11.53□□□□□ -0.56
TRAPPC4-203ENST00000447216 SFTA2Q6UW10 78 aa11.53□□□□□ -0.56
TRAPPC4-203ENST00000447216 ERG28Q9UKR5 140 aa11.53□□□□□ -0.56
TRAPPC4-203ENST00000447216 A0A096LNI7 61 aa11.52□□□□□ -0.57
TRAPPC4-203ENST00000447216 A0A0U1RRA0 63 aa11.52□□□□□ -0.57
TRAPPC4-203ENST00000447216 CHTF8P0CG12 524 aa11.52□□□□□ -0.57
TRAPPC4-203ENST00000447216 HERV-K104P63124 156 aa11.52□□□□□ -0.57
TRAPPC4-203ENST00000447216 GAGE2BQ13066 116 aa11.52□□□□□ -0.57
TRAPPC4-203ENST00000447216 SPATA45Q537H7 98 aa11.52□□□□□ -0.57
TRAPPC4-203ENST00000447216 IGKV2-24A0A0C4DH68 120 aa11.51□□□□□ -0.57
TRAPPC4-203ENST00000447216 PANO1I0J062 215 aa11.51□□□□□ -0.57
TRAPPC4-203ENST00000447216 GAGE2EQ4V326 116 aa11.51□□□□□ -0.57
TRAPPC4-203ENST00000447216 MEIG1Q5JSS6 88 aa11.51□□□□□ -0.57
TRAPPC4-203ENST00000447216 Q6ZRP5 223 aa11.51□□□□□ -0.57
TRAPPC4-203ENST00000447216 GAGE2DQ9UEU5 116 aa11.51□□□□□ -0.57
TRAPPC4-203ENST00000447216 NDUFC2-KCTD14E9PQ53 114 aa11.5□□□□□ -0.57
TRAPPC4-203ENST00000447216 TLX1NBP0CAT3 122 aa11.5□□□□□ -0.57
TRAPPC4-203ENST00000447216 SMIM13P0DJ93 91 aa11.5□□□□□ -0.57
TRAPPC4-203ENST00000447216 FAM30AQ9NZY2 134 aa11.5□□□□□ -0.57
TRAPPC4-203ENST00000447216 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC4-203ENST00000447216 A0A0J9YXY3 114 aa11.49□□□□□ -0.57
TRAPPC4-203ENST00000447216 LINC00158P58513 81 aa11.49□□□□□ -0.57
TRAPPC4-203ENST00000447216 TP73-AS1Q9UF72 201 aa11.49□□□□□ -0.57
TRAPPC4-203ENST00000447216 PTTG1IPP53801 180 aa11.48□□□□□ -0.57
TRAPPC4-203ENST00000447216 PKIGQ9Y2B9 76 aa11.48□□□□□ -0.57
TRAPPC4-203ENST00000447216 C14orf144Q96I85 54 aa11.46□□□□□ -0.57
TRAPPC4-203ENST00000447216 XAGE1AQ9HD64 81 aa11.46□□□□□ -0.57
TRAPPC4-203ENST00000447216 COX8AP10176 69 aa11.45□□□□□ -0.58
TRAPPC4-203ENST00000447216 HAMPP81172 84 aa11.45□□□□□ -0.58
TRAPPC4-203ENST00000447216 COX17Q14061 63 aa11.45□□□□□ -0.58
TRAPPC4-203ENST00000447216 SPACA4Q8TDM5 124 aa11.45□□□□□ -0.58
TRAPPC4-203ENST00000447216 SMIM6P0DI80 62 aa11.44□□□□□ -0.58
TRAPPC4-203ENST00000447216 C9orf129Q5T035 196 aaKnown RBP11.44□□□□□ -0.58
TRAPPC4-203ENST00000447216 SCGB1D4Q6XE38 83 aa11.44□□□□□ -0.58
TRAPPC4-203ENST00000447216 Q6ZSA8 131 aa11.44□□□□□ -0.58
TRAPPC4-203ENST00000447216 MIR7-3HGQ8N6C7 128 aa11.44□□□□□ -0.58
TRAPPC4-203ENST00000447216 DAND5Q8N907 189 aa11.44□□□□□ -0.58
TRAPPC4-203ENST00000447216 DPH3Q96FX2 82 aa11.44□□□□□ -0.58
TRAPPC4-203ENST00000447216 APOBP04114 4563 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-203ENST00000447216 SND1-IT1Q9HBX3 110 aa11.43□□□□□ -0.58
TRAPPC4-203ENST00000447216 LINC00587B1AMM8 73 aa11.42□□□□□ -0.58
TRAPPC4-203ENST00000447216 S100A12P80511 92 aa11.42□□□□□ -0.58
TRAPPC4-203ENST00000447216 CIRBPQ14011 172 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-203ENST00000447216 ADAMTSL4-AS1Q5T5F5 129 aa11.42□□□□□ -0.58
TRAPPC4-203ENST00000447216 BOD1L2Q8IYS8 172 aa11.42□□□□□ -0.58
TRAPPC4-203ENST00000447216 LITAFQ99732 161 aa11.42□□□□□ -0.58
TRAPPC4-203ENST00000447216 FAM168BA1KXE4 195 aa11.41□□□□□ -0.58
TRAPPC4-203ENST00000447216 TIMM17BO60830 172 aa11.4□□□□□ -0.58
TRAPPC4-203ENST00000447216 LINC00474Q9P2X8 69 aa11.4□□□□□ -0.58
TRAPPC4-203ENST00000447216 A0A087WYN8 130 aa11.39□□□□□ -0.59
TRAPPC4-203ENST00000447216 A0A1W2PNN7 141 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms