RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 CARHSP1Q9Y2V2 147 aaKnown RBP9.89□□□□□ -0.83
CTDSP1-204ENST00000443891 IGIPA6NJ69 53 aa9.88□□□□□ -0.83
CTDSP1-204ENST00000443891 APOC3P02656 99 aa9.88□□□□□ -0.83
CTDSP1-204ENST00000443891 HERVK_113P63121 156 aa9.88□□□□□ -0.83
CTDSP1-204ENST00000443891 C2orf82Q6UX34 121 aa9.88□□□□□ -0.83
CTDSP1-204ENST00000443891 LINC01549A6NIU2 74 aa9.87□□□□□ -0.83
CTDSP1-204ENST00000443891 SNAPINO95295 136 aa9.87□□□□□ -0.83
CTDSP1-204ENST00000443891 CKS1BP61024 79 aa9.87□□□□□ -0.83
CTDSP1-204ENST00000443891 C6orf226Q5I0X4 101 aa9.87□□□□□ -0.83
CTDSP1-204ENST00000443891 LINC00173Q6ZV60 143 aa9.87□□□□□ -0.83
CTDSP1-204ENST00000443891 FA2HQ7L5A8 372 aa9.87□□□□□ -0.83
CTDSP1-204ENST00000443891 KRTAP11-1Q8IUC1 163 aa9.87□□□□□ -0.83
CTDSP1-204ENST00000443891 KRTAP7-1Q8IUC3 87 aa9.87□□□□□ -0.83
CTDSP1-204ENST00000443891 SVBPQ8N300 66 aa9.87□□□□□ -0.83
CTDSP1-204ENST00000443891 MRPL18Q9H0U6 180 aaKnown RBP9.87□□□□□ -0.83
CTDSP1-204ENST00000443891 RPL13AP40429 203 aaKnown RBP9.86□□□□□ -0.83
CTDSP1-204ENST00000443891 C9orf129Q5T035 196 aaKnown RBP9.86□□□□□ -0.83
CTDSP1-204ENST00000443891 C10orf91Q5T1B1 145 aa9.86□□□□□ -0.83
CTDSP1-204ENST00000443891 PRR26Q8N8Z3 221 aa9.86□□□□□ -0.83
CTDSP1-204ENST00000443891 SCGB3A1Q96QR1 104 aa9.86□□□□□ -0.83
CTDSP1-204ENST00000443891 TIMM17AQ99595 171 aa9.86□□□□□ -0.83
CTDSP1-204ENST00000443891 NUPR1O60356 82 aa9.85□□□□□ -0.83
CTDSP1-204ENST00000443891 CXCL5P42830 114 aa9.85□□□□□ -0.83
CTDSP1-204ENST00000443891 GEMIN7Q9H840 131 aaKnown RBP9.85□□□□□ -0.83
CTDSP1-204ENST00000443891 LBHQ53QV2 105 aaPredicted RBP9.84□□□□□ -0.83
CTDSP1-204ENST00000443891 ALKBH7Q9BT30 221 aaPredicted RBP9.84□□□□□ -0.83
CTDSP1-204ENST00000443891 TOMM7Q9P0U1 55 aa9.84□□□□□ -0.83
CTDSP1-204ENST00000443891 TRAPPC1Q9Y5R8 145 aa9.84□□□□□ -0.83
CTDSP1-204ENST00000443891 KRTAP1-4P0C5Y4 121 aa9.83□□□□□ -0.84
CTDSP1-204ENST00000443891 TOMM6Q96B49 74 aa9.83□□□□□ -0.84
CTDSP1-204ENST00000443891 TP73-AS1Q9UF72 201 aa9.83□□□□□ -0.84
CTDSP1-204ENST00000443891 F8VRH5 84 aa9.82□□□□□ -0.84
CTDSP1-204ENST00000443891 ZNF861PO60384 105 aa9.82□□□□□ -0.84
CTDSP1-204ENST00000443891 ERASQ7Z444 233 aa9.82□□□□□ -0.84
CTDSP1-204ENST00000443891 ZC2HC1BQ5TFG8 222 aa9.81□□□□□ -0.84
CTDSP1-204ENST00000443891 CDKN2A-AS1Q9UH64 79 aa9.81□□□□□ -0.84
CTDSP1-204ENST00000443891 C22orf24Q9Y442 160 aa9.81□□□□□ -0.84
CTDSP1-204ENST00000443891 RAB5BP61020 215 aa9.79□□□□□ -0.84
CTDSP1-204ENST00000443891 RNF213Q63HN8 5207 aa9.79□□□□□ -0.84
CTDSP1-204ENST00000443891 PDZD11Q5EBL8 140 aa9.78□□□□□ -0.84
CTDSP1-204ENST00000443891 TINCRA0A1B0GVN0 87 aa9.77□□□□□ -0.85
CTDSP1-204ENST00000443891 LINC00469Q8N7U9 141 aa9.77□□□□□ -0.85
CTDSP1-204ENST00000443891 IGLV5-45A0A087WSX0 123 aa9.76□□□□□ -0.85
CTDSP1-204ENST00000443891 NDUFA6P56556 154 aa9.76□□□□□ -0.85
CTDSP1-204ENST00000443891 MRPL55Q7Z7F7 128 aaKnown RBP9.76□□□□□ -0.85
CTDSP1-204ENST00000443891 XAGE1AQ9HD64 81 aa9.76□□□□□ -0.85
CTDSP1-204ENST00000443891 LINC01546A6NGU7 62 aa9.75□□□□□ -0.85
CTDSP1-204ENST00000443891 LINC00614P0C842 121 aa9.75□□□□□ -0.85
CTDSP1-204ENST00000443891 RPL28P46779 137 aaKnown RBP9.75□□□□□ -0.85
CTDSP1-204ENST00000443891 SMIM1B2RUZ4 78 aa9.74□□□□□ -0.85
CTDSP1-204ENST00000443891 PMVKQ15126 192 aa9.74□□□□□ -0.85
CTDSP1-204ENST00000443891 COX7B2Q8TF08 81 aa9.74□□□□□ -0.85
CTDSP1-204ENST00000443891 H3BRM9 83 aa9.73□□□□□ -0.85
CTDSP1-204ENST00000443891 BCE1O60756 84 aa9.73□□□□□ -0.85
CTDSP1-204ENST00000443891 CST9LQ9H4G1 147 aa9.73□□□□□ -0.85
CTDSP1-204ENST00000443891 HBDP02042 147 aa9.72□□□□□ -0.85
CTDSP1-204ENST00000443891 IGLV5-37A0A075B6J1 123 aa9.71□□□□□ -0.86
CTDSP1-204ENST00000443891 C18orf32Q8TCD1 76 aa9.71□□□□□ -0.86
CTDSP1-204ENST00000443891 ATP5LO75964 103 aa9.7□□□□□ -0.86
CTDSP1-204ENST00000443891 LINC00167Q96N53 147 aa9.69□□□□□ -0.86
CTDSP1-204ENST00000443891 CRYGAP11844 174 aa9.68□□□□□ -0.86
CTDSP1-204ENST00000443891 PRR4Q16378 134 aa9.68□□□□□ -0.86
CTDSP1-204ENST00000443891 LPAP08519 4548 aa9.67□□□□□ -0.86
CTDSP1-204ENST00000443891 SPINK8P0C7L1 97 aa9.66□□□□□ -0.86
CTDSP1-204ENST00000443891 PMCHL1Q16048 86 aa9.66□□□□□ -0.86
CTDSP1-204ENST00000443891 BAGE3Q86Y29 109 aa9.66□□□□□ -0.86
CTDSP1-204ENST00000443891 NKAPP1Q8N9T2 125 aa9.66□□□□□ -0.86
CTDSP1-204ENST00000443891 CHCHD1Q96BP2 118 aaKnown RBP9.66□□□□□ -0.86
CTDSP1-204ENST00000443891 ATP6V1G1O75348 118 aa9.64□□□□□ -0.87
CTDSP1-204ENST00000443891 CTAG1AP78358 180 aa9.64□□□□□ -0.87
CTDSP1-204ENST00000443891 CBLN2Q8IUK8 224 aa9.64□□□□□ -0.87
CTDSP1-204ENST00000443891 TYMSOSQ8TAI1 123 aa9.64□□□□□ -0.87
CTDSP1-204ENST00000443891 IGLV5-39A0A0G2JS06 123 aa9.63□□□□□ -0.87
CTDSP1-204ENST00000443891 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
CTDSP1-204ENST00000443891 HSBP1O75506 76 aa9.63□□□□□ -0.87
CTDSP1-204ENST00000443891 IGLC3P0DOY3 106 aa9.63□□□□□ -0.87
CTDSP1-204ENST00000443891 UBE2AP49459 152 aa9.63□□□□□ -0.87
CTDSP1-204ENST00000443891 COX17Q14061 63 aa9.63□□□□□ -0.87
CTDSP1-204ENST00000443891 FAM229BQ4G0N7 80 aa9.63□□□□□ -0.87
CTDSP1-204ENST00000443891 SFTA2Q6UW10 78 aa9.63□□□□□ -0.87
CTDSP1-204ENST00000443891 KRTAP13-1Q8IUC0 172 aa9.63□□□□□ -0.87
CTDSP1-204ENST00000443891 A0A087X002 238 aa9.62□□□□□ -0.87
CTDSP1-204ENST00000443891 S100A1P23297 94 aa9.62□□□□□ -0.87
CTDSP1-204ENST00000443891 TMEM170BQ5T4T1 132 aa9.62□□□□□ -0.87
CTDSP1-204ENST00000443891 SLC7A5P1Q8MH63 180 aa9.62□□□□□ -0.87
CTDSP1-204ENST00000443891 CHTOPQ9Y3Y2 248 aaKnown RBP9.61□□□□□ -0.87
CTDSP1-204ENST00000443891 GAGE10A6NGK3 116 aa9.6□□□□□ -0.87
CTDSP1-204ENST00000443891 RPL24P83731 157 aaKnown RBP9.6□□□□□ -0.87
CTDSP1-204ENST00000443891 URB1-AS1Q96HZ7 61 aa9.6□□□□□ -0.87
CTDSP1-204ENST00000443891 A0A096LNJ9 63 aa9.59□□□□□ -0.87
CTDSP1-204ENST00000443891 A0A0U1RQV1 116 aa9.59□□□□□ -0.87
CTDSP1-204ENST00000443891 IFI27L1Q96BM0 104 aa9.59□□□□□ -0.87
CTDSP1-204ENST00000443891 YPEL4Q96NS1 127 aa9.59□□□□□ -0.87
CTDSP1-204ENST00000443891 TSPAN13O95857 204 aa9.58□□□□□ -0.88
CTDSP1-204ENST00000443891 TRGC2P03986 189 aa9.58□□□□□ -0.88
CTDSP1-204ENST00000443891 ZNF22P17026 224 aaPredicted RBP9.57□□□□□ -0.88
CTDSP1-204ENST00000443891 PFN2P35080 140 aa9.57□□□□□ -0.88
CTDSP1-204ENST00000443891 ERG28Q9UKR5 140 aa9.57□□□□□ -0.88
CTDSP1-204ENST00000443891 VPREB1P12018 145 aa9.56□□□□□ -0.88
CTDSP1-204ENST00000443891 SND1-IT1Q9HBX3 110 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms