RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.23□□□□□ -0.45
EDEM1-203ENST00000443790 FAM19A3Q7Z5A8 133 aa12.23□□□□□ -0.45
EDEM1-203ENST00000443790 CST9LQ9H4G1 147 aa12.23□□□□□ -0.45
EDEM1-203ENST00000443790 GEMIN7Q9H840 131 aaKnown RBP12.23□□□□□ -0.45
EDEM1-203ENST00000443790 NDUFA6P56556 154 aa12.22□□□□□ -0.45
EDEM1-203ENST00000443790 PMVKQ15126 192 aa12.22□□□□□ -0.45
EDEM1-203ENST00000443790 HERVK_113P63121 156 aa12.21□□□□□ -0.45
EDEM1-203ENST00000443790 SEC11AP67812 179 aa12.21□□□□□ -0.45
EDEM1-203ENST00000443790 RPL18AQ02543 176 aaKnown RBP12.21□□□□□ -0.45
EDEM1-203ENST00000443790 C9orf116Q5BN46 136 aaPredicted RBP12.21□□□□□ -0.45
EDEM1-203ENST00000443790 BAGE3Q86Y29 109 aa12.21□□□□□ -0.45
EDEM1-203ENST00000443790 CDKN2A-AS1Q9UH64 79 aa12.21□□□□□ -0.45
EDEM1-203ENST00000443790 KIAA0087Q14695 138 aa12.2□□□□□ -0.46
EDEM1-203ENST00000443790 PDZD11Q5EBL8 140 aa12.2□□□□□ -0.46
EDEM1-203ENST00000443790 C10orf25Q5T742 122 aa12.2□□□□□ -0.46
EDEM1-203ENST00000443790 LINC01561Q8N1V8 128 aa12.2□□□□□ -0.46
EDEM1-203ENST00000443790 PSORS1C2Q9UIG4 136 aa12.2□□□□□ -0.46
EDEM1-203ENST00000443790 UNQ6190/PRO20217Q6UXQ8 127 aa12.19□□□□□ -0.46
EDEM1-203ENST00000443790 CHCHD1Q96BP2 118 aaKnown RBP12.19□□□□□ -0.46
EDEM1-203ENST00000443790 TOMM7Q9P0U1 55 aa12.19□□□□□ -0.46
EDEM1-203ENST00000443790 TINCRA0A1B0GVN0 87 aa12.18□□□□□ -0.46
EDEM1-203ENST00000443790 NDUFA1O15239 70 aa12.18□□□□□ -0.46
EDEM1-203ENST00000443790 LINC00469Q8N7U9 141 aa12.18□□□□□ -0.46
EDEM1-203ENST00000443790 RNF151Q2KHN1 245 aa12.17□□□□□ -0.46
EDEM1-203ENST00000443790 PACRGQ96M98 296 aaPredicted RBP12.17□□□□□ -0.46
EDEM1-203ENST00000443790 F8WDY8 70 aa12.16□□□□□ -0.46
EDEM1-203ENST00000443790 ATP5LO75964 103 aa12.16□□□□□ -0.46
EDEM1-203ENST00000443790 PRSS2P07478 247 aa12.16□□□□□ -0.46
EDEM1-203ENST00000443790 C2orf82Q6UX34 121 aa12.16□□□□□ -0.46
EDEM1-203ENST00000443790 PHF5AQ7RTV0 110 aaKnown RBP12.16□□□□□ -0.46
EDEM1-203ENST00000443790 FAM19A2Q8N3H0 131 aa12.16□□□□□ -0.46
EDEM1-203ENST00000443790 MRPL35Q9NZE8 188 aaKnown RBP12.16□□□□□ -0.46
EDEM1-203ENST00000443790 C1orf137Q5JT78 98 aa12.15□□□□□ -0.46
EDEM1-203ENST00000443790 C6orf48Q9UBA6 75 aa12.15□□□□□ -0.46
EDEM1-203ENST00000443790 HSBP1O75506 76 aa12.14□□□□□ -0.47
EDEM1-203ENST00000443790 SERF1AO75920 110 aa12.13□□□□□ -0.47
EDEM1-203ENST00000443790 C6orf226Q5I0X4 101 aa12.13□□□□□ -0.47
EDEM1-203ENST00000443790 IGLV5-45A0A087WSX0 123 aa12.12□□□□□ -0.47
EDEM1-203ENST00000443790 SPINK8P0C7L1 97 aa12.12□□□□□ -0.47
EDEM1-203ENST00000443790 SMIM1B2RUZ4 78 aa12.11□□□□□ -0.47
EDEM1-203ENST00000443790 IGLC3P0DOY3 106 aa12.11□□□□□ -0.47
EDEM1-203ENST00000443790 LINC00310P59036 64 aa12.11□□□□□ -0.47
EDEM1-203ENST00000443790 CKS1BP61024 79 aa12.11□□□□□ -0.47
EDEM1-203ENST00000443790 Q8IZM0 81 aa12.11□□□□□ -0.47
EDEM1-203ENST00000443790 IFI27L1Q96BM0 104 aa12.11□□□□□ -0.47
EDEM1-203ENST00000443790 NUPR1O60356 82 aa12.1□□□□□ -0.47
EDEM1-203ENST00000443790 IGLV7-43P04211 117 aa12.09□□□□□ -0.47
EDEM1-203ENST00000443790 TRBV30A0A0K0K1B3 111 aa12.08□□□□□ -0.48
EDEM1-203ENST00000443790 FAM168BA1KXE4 195 aa12.08□□□□□ -0.48
EDEM1-203ENST00000443790 H3BRM9 83 aa12.08□□□□□ -0.48
EDEM1-203ENST00000443790 TLX1NBP0CAT3 122 aa12.08□□□□□ -0.48
EDEM1-203ENST00000443790 ZNF22P17026 224 aaPredicted RBP12.08□□□□□ -0.48
EDEM1-203ENST00000443790 GAGE2EQ4V326 116 aa12.08□□□□□ -0.48
EDEM1-203ENST00000443790 COX7B2Q8TF08 81 aa12.08□□□□□ -0.48
EDEM1-203ENST00000443790 DIRC1Q969H9 104 aa12.08□□□□□ -0.48
EDEM1-203ENST00000443790 GAGE2DQ9UEU5 116 aa12.08□□□□□ -0.48
EDEM1-203ENST00000443790 CHTOPQ9Y3Y2 248 aaKnown RBP12.08□□□□□ -0.48
EDEM1-203ENST00000443790 C11orf86A6NJI1 115 aa12.07□□□□□ -0.48
EDEM1-203ENST00000443790 KRTAP11-1Q8IUC1 163 aa12.06□□□□□ -0.48
EDEM1-203ENST00000443790 FAM19A5Q7Z5A7 132 aaPredicted RBP12.05□□□□□ -0.48
EDEM1-203ENST00000443790 PRR26Q8N8Z3 221 aa12.05□□□□□ -0.48
EDEM1-203ENST00000443790 TRAV12-1A0A0B4J245 112 aa12.04□□□□□ -0.48
EDEM1-203ENST00000443790 H0Y8G0 127 aa12.04□□□□□ -0.48
EDEM1-203ENST00000443790 H0Y9J4 135 aa12.04□□□□□ -0.48
EDEM1-203ENST00000443790 LEPROTL1O95214 131 aa12.04□□□□□ -0.48
EDEM1-203ENST00000443790 FABP4P15090 132 aa12.04□□□□□ -0.48
EDEM1-203ENST00000443790 TMEM170BQ5T4T1 132 aa12.04□□□□□ -0.48
EDEM1-203ENST00000443790 LPAP08519 4548 aa12.03□□□□□ -0.48
EDEM1-203ENST00000443790 F8VRH5 84 aa12.03□□□□□ -0.48
EDEM1-203ENST00000443790 HIST1H2BKO60814 126 aa12.03□□□□□ -0.48
EDEM1-203ENST00000443790 HIST1H2BJP06899 126 aa12.03□□□□□ -0.48
EDEM1-203ENST00000443790 HIST1H2BOP23527 126 aa12.03□□□□□ -0.48
EDEM1-203ENST00000443790 HIST1H2BBP33778 126 aa12.03□□□□□ -0.48
EDEM1-203ENST00000443790 HIST1H2BDP58876 126 aa12.03□□□□□ -0.48
EDEM1-203ENST00000443790 HIST1H2BCP62807 126 aa12.03□□□□□ -0.48
EDEM1-203ENST00000443790 HIST2H2BEQ16778 126 aa12.03□□□□□ -0.48
EDEM1-203ENST00000443790 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.03□□□□□ -0.48
EDEM1-203ENST00000443790 HIST1H2BHQ93079 126 aa12.03□□□□□ -0.48
EDEM1-203ENST00000443790 HIST1H2BNQ99877 126 aa12.03□□□□□ -0.48
EDEM1-203ENST00000443790 HIST1H2BMQ99879 126 aa12.03□□□□□ -0.48
EDEM1-203ENST00000443790 NDUFC2-KCTD14E9PQ53 114 aa12.02□□□□□ -0.49
EDEM1-203ENST00000443790 CXCL5P42830 114 aa12.02□□□□□ -0.49
EDEM1-203ENST00000443790 KRTAP7-1Q8IUC3 87 aa12.02□□□□□ -0.49
EDEM1-203ENST00000443790 IGLV5-39A0A0G2JS06 123 aa12□□□□□ -0.49
EDEM1-203ENST00000443790 M0QXV9 152 aa12□□□□□ -0.49
EDEM1-203ENST00000443790 S100A1P23297 94 aa12□□□□□ -0.49
EDEM1-203ENST00000443790 ATP6V1G1O75348 118 aa11.99□□□□□ -0.49
EDEM1-203ENST00000443790 HSPB8Q9UJY1 196 aa11.99□□□□□ -0.49
EDEM1-203ENST00000443790 KRTAP1-4P0C5Y4 121 aa11.98□□□□□ -0.49
EDEM1-203ENST00000443790 IGLV1-50A0A075B6I6 118 aa11.97□□□□□ -0.49
EDEM1-203ENST00000443790 UBE2BP63146 152 aa11.97□□□□□ -0.49
EDEM1-203ENST00000443790 C9orf129Q5T035 196 aaKnown RBP11.97□□□□□ -0.49
EDEM1-203ENST00000443790 XAGE1AQ9HD64 81 aa11.96□□□□□ -0.49
EDEM1-203ENST00000443790 TMEM223A0PJW6 202 aa11.95□□□□□ -0.5
EDEM1-203ENST00000443790 PMCHL2Q9BQD1 86 aa11.94□□□□□ -0.5
EDEM1-203ENST00000443790 ZNF625Q96I27 306 aaPredicted RBP11.93□□□□□ -0.5
EDEM1-203ENST00000443790 MAP1LC3CQ9BXW4 147 aa11.92□□□□□ -0.5
EDEM1-203ENST00000443790 PFN2P35080 140 aa11.91□□□□□ -0.5
EDEM1-203ENST00000443790 RPL13AP40429 203 aaKnown RBP11.89□□□□□ -0.51
EDEM1-203ENST00000443790 DPM2O94777 84 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms