RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 LINC00528Q8N1L1 170 aa6.9□□□□□ -1.3
HDAC6-211ENST00000443563 HSPB8Q9UJY1 196 aa6.9□□□□□ -1.3
HDAC6-211ENST00000443563 CHTOPQ9Y3Y2 248 aaKnown RBP6.9□□□□□ -1.3
HDAC6-211ENST00000443563 A0A087WYN8 130 aa6.89□□□□□ -1.31
HDAC6-211ENST00000443563 ATP6V1G1O75348 118 aa6.89□□□□□ -1.31
HDAC6-211ENST00000443563 TLX1NBP0CAT3 122 aa6.89□□□□□ -1.31
HDAC6-211ENST00000443563 RPL18AQ02543 176 aaKnown RBP6.89□□□□□ -1.31
HDAC6-211ENST00000443563 GAGE2BQ13066 116 aa6.89□□□□□ -1.31
HDAC6-211ENST00000443563 STPG4Q8N801 248 aa6.89□□□□□ -1.31
HDAC6-211ENST00000443563 COX7B2Q8TF08 81 aa6.89□□□□□ -1.31
HDAC6-211ENST00000443563 PLAC8Q9NZF1 115 aa6.89□□□□□ -1.31
HDAC6-211ENST00000443563 F8VRH5 84 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 HIST1H2BKO60814 126 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 HIST1H2BJP06899 126 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 SPINK8P0C7L1 97 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 ZNF22P17026 224 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-211ENST00000443563 HIST1H2BOP23527 126 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 HIST1H2BBP33778 126 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 HIST1H2BDP58876 126 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 LINC00310P59036 64 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 HIST1H2BCP62807 126 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 HIST2H2BEQ16778 126 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-211ENST00000443563 C10orf25Q5T742 122 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 C2orf82Q6UX34 121 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 HIST1H2BHQ93079 126 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 HIST1H2BNQ99877 126 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 HIST1H2BMQ99879 126 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 C6orf48Q9UBA6 75 aa6.88□□□□□ -1.31
HDAC6-211ENST00000443563 ABCA13Q86UQ4 5058 aa6.87□□□□□ -1.31
HDAC6-211ENST00000443563 TMEM170BQ5T4T1 132 aa6.87□□□□□ -1.31
HDAC6-211ENST00000443563 C7orf33Q8WU49 177 aa6.87□□□□□ -1.31
HDAC6-211ENST00000443563 KRTAP17-1Q9BYP8 105 aa6.87□□□□□ -1.31
HDAC6-211ENST00000443563 PCLOQ9Y6V0 5065 aa6.87□□□□□ -1.31
HDAC6-211ENST00000443563 C11orf86A6NJI1 115 aa6.86□□□□□ -1.31
HDAC6-211ENST00000443563 NDUFC2-KCTD14E9PQ53 114 aa6.86□□□□□ -1.31
HDAC6-211ENST00000443563 NUPR1O60356 82 aa6.86□□□□□ -1.31
HDAC6-211ENST00000443563 FABP4P15090 132 aa6.86□□□□□ -1.31
HDAC6-211ENST00000443563 SFTA2Q6UW10 78 aa6.86□□□□□ -1.31
HDAC6-211ENST00000443563 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
HDAC6-211ENST00000443563 IGLV5-39A0A0G2JS06 123 aa6.85□□□□□ -1.31
HDAC6-211ENST00000443563 Q6ZRP5 223 aa6.85□□□□□ -1.31
HDAC6-211ENST00000443563 MAP1LC3CQ9BXW4 147 aa6.85□□□□□ -1.31
HDAC6-211ENST00000443563 H0Y8G0 127 aa6.84□□□□□ -1.31
HDAC6-211ENST00000443563 RPL37AP61513 92 aaKnown RBP6.84□□□□□ -1.31
HDAC6-211ENST00000443563 ODF1Q14990 250 aa6.84□□□□□ -1.31
HDAC6-211ENST00000443563 INAFM2P0DMQ5 153 aa6.83□□□□□ -1.32
HDAC6-211ENST00000443563 PLNP26678 52 aa6.83□□□□□ -1.32
HDAC6-211ENST00000443563 GAGE2EQ4V326 116 aa6.83□□□□□ -1.32
HDAC6-211ENST00000443563 C9orf116Q5BN46 136 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-211ENST00000443563 GAGE2DQ9UEU5 116 aa6.83□□□□□ -1.32
HDAC6-211ENST00000443563 PKHD1L1Q86WI1 4243 aa6.82□□□□□ -1.32
HDAC6-211ENST00000443563 TMEM223A0PJW6 202 aa6.82□□□□□ -1.32
HDAC6-211ENST00000443563 DPM2O94777 84 aa6.82□□□□□ -1.32
HDAC6-211ENST00000443563 COA6Q5JTJ3 125 aaKnown RBP6.82□□□□□ -1.32
HDAC6-211ENST00000443563 A0A1W2PNN7 141 aa6.8□□□□□ -1.32
HDAC6-211ENST00000443563 IGKCP01834 107 aa6.8□□□□□ -1.32
HDAC6-211ENST00000443563 HERVK_113P61574 105 aa6.8□□□□□ -1.32
HDAC6-211ENST00000443563 COX17Q14061 63 aa6.8□□□□□ -1.32
HDAC6-211ENST00000443563 SYS1-DBNDD2H3BUS1 97 aa6.78□□□□□ -1.32
HDAC6-211ENST00000443563 KRTAP10-4P60372 401 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-211ENST00000443563 C9orf129Q5T035 196 aaKnown RBP6.78□□□□□ -1.32
HDAC6-211ENST00000443563 PET117Q6UWS5 81 aa6.78□□□□□ -1.32
HDAC6-211ENST00000443563 FAM19A5Q7Z5A7 132 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-211ENST00000443563 ERG28Q9UKR5 140 aa6.78□□□□□ -1.32
HDAC6-211ENST00000443563 FAM168BA1KXE4 195 aa6.77□□□□□ -1.33
HDAC6-211ENST00000443563 PFN2P35080 140 aa6.77□□□□□ -1.33
HDAC6-211ENST00000443563 HERV-K104P63124 156 aa6.77□□□□□ -1.33
HDAC6-211ENST00000443563 PLEKHB2Q96CS7 222 aa6.77□□□□□ -1.33
HDAC6-211ENST00000443563 ZNF625Q96I27 306 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-211ENST00000443563 LINC00587B1AMM8 73 aa6.76□□□□□ -1.33
HDAC6-211ENST00000443563 M0QXV9 152 aa6.76□□□□□ -1.33
HDAC6-211ENST00000443563 LEPROTO15243 131 aa6.76□□□□□ -1.33
HDAC6-211ENST00000443563 PHF5AQ7RTV0 110 aaKnown RBP6.76□□□□□ -1.33
HDAC6-211ENST00000443563 PMCHL2Q9BQD1 86 aa6.76□□□□□ -1.33
HDAC6-211ENST00000443563 XAGE1AQ9HD64 81 aa6.76□□□□□ -1.33
HDAC6-211ENST00000443563 PLA2G2DQ9UNK4 145 aa6.76□□□□□ -1.33
HDAC6-211ENST00000443563 MYCBP2O75592 4640 aa6.76□□□□□ -1.33
HDAC6-211ENST00000443563 MYMXA0A1B0GTQ4 84 aa6.75□□□□□ -1.33
HDAC6-211ENST00000443563 S100A6P06703 90 aa6.75□□□□□ -1.33
HDAC6-211ENST00000443563 AKR1D1P51857 326 aa6.75□□□□□ -1.33
HDAC6-211ENST00000443563 PRR3P79522 188 aaKnown RBP6.75□□□□□ -1.33
HDAC6-211ENST00000443563 LBHQ53QV2 105 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-211ENST00000443563 LINC01545Q5VT33 79 aa6.75□□□□□ -1.33
HDAC6-211ENST00000443563 NDUFA12Q9UI09 145 aa6.75□□□□□ -1.33
HDAC6-211ENST00000443563 C20orf202A1L168 122 aa6.74□□□□□ -1.33
HDAC6-211ENST00000443563 C3orf79P0CE67 100 aa6.74□□□□□ -1.33
HDAC6-211ENST00000443563 NMUP48645 174 aa6.74□□□□□ -1.33
HDAC6-211ENST00000443563 LINC00158P58513 81 aa6.74□□□□□ -1.33
HDAC6-211ENST00000443563 KRTDAPP60985 99 aa6.74□□□□□ -1.33
HDAC6-211ENST00000443563 UBE2BP63146 152 aa6.74□□□□□ -1.33
HDAC6-211ENST00000443563 TP73-AS1Q9UF72 201 aa6.74□□□□□ -1.33
HDAC6-211ENST00000443563 J3QQQ9 107 aa6.73□□□□□ -1.33
HDAC6-211ENST00000443563 LGALS3P17931 250 aaKnown RBP6.73□□□□□ -1.33
HDAC6-211ENST00000443563 S100A2P29034 98 aa6.73□□□□□ -1.33
HDAC6-211ENST00000443563 MEIG1Q5JSS6 88 aa6.73□□□□□ -1.33
HDAC6-211ENST00000443563 C22orf24Q9Y442 160 aa6.73□□□□□ -1.33
HDAC6-211ENST00000443563 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
HDAC6-211ENST00000443563 E9PLD3 99 aa6.72□□□□□ -1.33
HDAC6-211ENST00000443563 RPL24P83731 157 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms