RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 C1orf158Q8N1D5 194 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 IGHV3OR16-8A0A075B7F1 116 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 LECT2O14960 151 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 ZNF73O43830 326 aaPredicted RBP2.04□□□□□ -2.08
LIG4-203ENST00000442234 IGF1P05019 195 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 KLKP1Q107X0 134 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 SERTAD4-AS1Q5TG53 156 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 PVRIGQ6DKI7 326 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 C19orf73Q9NVV2 129 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 HRNRQ86YZ3 2850 aaPredicted RBP2.04□□□□□ -2.08
LIG4-203ENST00000442234 PKHD1L1Q86WI1 4243 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 H3BRN7 92 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 CHKB-CPT1BH3BT56 60 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 ZNF876PQ49A33 203 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 C6orf223Q8N319 242 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 TMEM167AQ8TBQ9 72 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 OPRPNQ99935 248 aaPredicted RBP2.03□□□□□ -2.08
LIG4-203ENST00000442234 ESM1Q9NQ30 184 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 IGLV3-12A0A075B6K2 115 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 RPL11P62913 178 aaKnown RBP2.03□□□□□ -2.08
LIG4-203ENST00000442234 Q8N6K4 173 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 ORMDL1Q9P0S3 153 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 ZNRD1Q9P1U0 126 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 IGHV3OR16-13A0A075B7E8 117 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 IGHV3-74A0A0B4J1X5 117 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 IGHV1-18A0A0C4DH31 117 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 FSTL3O95633 263 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 UBE2AP49459 152 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 RPL36AP83881 106 aaKnown RBP2.03□□□□□ -2.08
LIG4-203ENST00000442234 C15orf32Q32M92 178 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 KRTAP19-1Q8IUB9 90 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 RPL36ALQ969Q0 106 aaKnown RBP2.03□□□□□ -2.08
LIG4-203ENST00000442234 CNFNQ9BYD5 112 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 ZNF580Q9UK33 172 aa2.03□□□□□ -2.08
LIG4-203ENST00000442234 A0A0J9YX75 114 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 K7EMT4 169 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 DEFB4AO15263 64 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 TMEM254Q8TBM7 123 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 IGHV3OR16-12A0A075B7B8 117 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 A0A087WWL8 130 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 IGLV3-32A0A0A0MS00 114 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 JMJD7-PLA2G4BH0Y9G9 81 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 FAM229BQ4G0N7 80 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 CD164L2Q6UWJ8 174 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 Q6ZVQ6 151 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 Q9H8V8 135 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.02□□□□□ -2.09
LIG4-203ENST00000442234 IGHV3-66A0A0C4DH42 116 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 A6NED7 52 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 EPM2AB3EWF7 344 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 C8orf87E5RJ46 101 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 H0YGX0 51 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 OVOL3O00110 214 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 CCL24O00175 119 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 PRYO14603 147 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 SLPIP03973 132 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 NREPQ16612 68 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 C10orf99Q6UWK7 81 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 LYPD2Q6UXB3 125 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 MIR7-3HGQ8N6C7 128 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 LINC00308Q8TCZ7 52 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 HYDINQ4G0P3 5121 aa2.02□□□□□ -2.09
LIG4-203ENST00000442234 IGHV3-49A0A0A0MS15 119 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 M0R378 163 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 IGHV3-23P01764 117 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 HTN1P15515 57 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 ZNF491Q8N8L2 437 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 NKAPP1Q8N9T2 125 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 AMELXQ99217 191 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 IGIPA6NJ69 53 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 LHBP01229 141 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 SCXQ7RTU7 201 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 LINC00269Q8N2A0 174 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 KRTAP9-2Q9BYQ4 174 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 TRBV10-3A0A0K0K1G6 114 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 BCE1O60756 84 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 TSHBP01222 138 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 IGKV1-17P01599 117 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 IGHV1-69P01742 117 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 RNASE4P34096 147 aaKnown RBP2.01□□□□□ -2.09
LIG4-203ENST00000442234 NANOS2P60321 138 aaKnown RBP2.01□□□□□ -2.09
LIG4-203ENST00000442234 PRR4Q16378 134 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 C19orf54Q5BKX5 351 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 TM2D3Q9BRN9 247 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 TOMM7Q9P0U1 55 aa2.01□□□□□ -2.09
LIG4-203ENST00000442234 IGKV3D-15A0A087WSY6 115 aa2□□□□□ -2.09
LIG4-203ENST00000442234 TRAV10A0A0B4J240 114 aa2□□□□□ -2.09
LIG4-203ENST00000442234 ZNF503-AS2A6NEH8 195 aa2□□□□□ -2.09
LIG4-203ENST00000442234 PRAC2D3DTV9 90 aa2□□□□□ -2.09
LIG4-203ENST00000442234 IGKV3-15P01624 115 aa2□□□□□ -2.09
LIG4-203ENST00000442234 IGLV2-23P01705 113 aa2□□□□□ -2.09
LIG4-203ENST00000442234 IGHV1-8P0DP01 117 aa2□□□□□ -2.09
LIG4-203ENST00000442234 CCL3L1P16619 93 aa2□□□□□ -2.09
LIG4-203ENST00000442234 LINC00158P58513 81 aa2□□□□□ -2.09
LIG4-203ENST00000442234 DSCR9P59020 149 aa2□□□□□ -2.09
LIG4-203ENST00000442234 UNQ9165/PRO28630Q6UXU0 137 aa2□□□□□ -2.09
LIG4-203ENST00000442234 KRTAP1-3Q8IUG1 177 aa2□□□□□ -2.09
LIG4-203ENST00000442234 Q8N2B8 174 aa2□□□□□ -2.09
LIG4-203ENST00000442234 FAM218AQ96MZ4 157 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms