RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 DEFB131BA0A096LNP1 70 aa4.56□□□□□ -1.68
HDAC6-210ENST00000441703 NDUFC2-KCTD14E9PQ53 114 aa4.56□□□□□ -1.68
HDAC6-210ENST00000441703 MGPP08493 103 aa4.56□□□□□ -1.68
HDAC6-210ENST00000441703 S100A4P26447 101 aaKnown RBP4.56□□□□□ -1.68
HDAC6-210ENST00000441703 RNASE4P34096 147 aaKnown RBP4.56□□□□□ -1.68
HDAC6-210ENST00000441703 MIAQ16674 131 aa4.56□□□□□ -1.68
HDAC6-210ENST00000441703 FAM222AQ5U5X8 452 aa4.56□□□□□ -1.68
HDAC6-210ENST00000441703 FAM19A4Q96LR4 140 aa4.56□□□□□ -1.68
HDAC6-210ENST00000441703 TIMM21Q9BVV7 248 aa4.56□□□□□ -1.68
HDAC6-210ENST00000441703 MAP6D1Q9H9H5 199 aa4.56□□□□□ -1.68
HDAC6-210ENST00000441703 TRBV7-1A0A0A6YYK4 115 aa4.55□□□□□ -1.68
HDAC6-210ENST00000441703 F5H768 121 aa4.55□□□□□ -1.68
HDAC6-210ENST00000441703 RPL18AQ02543 176 aaKnown RBP4.55□□□□□ -1.68
HDAC6-210ENST00000441703 ODF3L2Q3SX64 289 aa4.55□□□□□ -1.68
HDAC6-210ENST00000441703 C6orf223Q8N319 242 aa4.55□□□□□ -1.68
HDAC6-210ENST00000441703 RNF182Q8N6D2 247 aa4.55□□□□□ -1.68
HDAC6-210ENST00000441703 ZFAND2AQ8N6M9 145 aa4.55□□□□□ -1.68
HDAC6-210ENST00000441703 SERP2Q8N6R1 65 aa4.55□□□□□ -1.68
HDAC6-210ENST00000441703 SMCR5Q8TEV8 140 aa4.55□□□□□ -1.68
HDAC6-210ENST00000441703 UPK3BQ9BT76 320 aa4.55□□□□□ -1.68
HDAC6-210ENST00000441703 PYGO1Q9Y3Y4 419 aa4.55□□□□□ -1.68
HDAC6-210ENST00000441703 NACAE9PAV3 2078 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 IGHV1-58A0A0C4DH39 117 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 FAM229AH3BQW9 127 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 COX7A2LO14548 114 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 IGHV3-30-3P0DP02 117 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 RNASE3P12724 160 aaKnown RBP4.54□□□□□ -1.68
HDAC6-210ENST00000441703 RPL39P62891 51 aaKnown RBP4.54□□□□□ -1.68
HDAC6-210ENST00000441703 MRPS36P82909 103 aaKnown RBP4.54□□□□□ -1.68
HDAC6-210ENST00000441703 ZNF415Q09FC8 603 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 C15orf32Q32M92 178 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 SUMO4Q6EEV6 95 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 Q6ZSN1 163 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 COPS9Q8WXC6 57 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 CLEC2BQ92478 149 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 S4R3C0 116 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 SRRM2Q9UQ35 2752 aaKnown RBP4.54□□□□□ -1.68
HDAC6-210ENST00000441703 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
HDAC6-210ENST00000441703 TRAV8-3A0A0A6YYJ7 113 aa4.53□□□□□ -1.68
HDAC6-210ENST00000441703 hADV29S1A0JD25 119 aa4.53□□□□□ -1.68
HDAC6-210ENST00000441703 PRSS2P07478 247 aa4.53□□□□□ -1.68
HDAC6-210ENST00000441703 BAALC-AS2P0C853 105 aa4.53□□□□□ -1.68
HDAC6-210ENST00000441703 PRR9Q5T870 116 aa4.53□□□□□ -1.68
HDAC6-210ENST00000441703 Q6JHZ5 121 aa4.53□□□□□ -1.68
HDAC6-210ENST00000441703 C20orf203Q8NBC4 194 aa4.53□□□□□ -1.68
HDAC6-210ENST00000441703 VPS13BQ7Z7G8 4022 aa4.53□□□□□ -1.68
HDAC6-210ENST00000441703 IGLV4-3A0A075B6K6 122 aa4.52□□□□□ -1.69
HDAC6-210ENST00000441703 A0A0J9YXV3 536 aa4.52□□□□□ -1.69
HDAC6-210ENST00000441703 TINCRA0A1B0GVN0 87 aa4.52□□□□□ -1.69
HDAC6-210ENST00000441703 NDUFC2O95298 119 aa4.52□□□□□ -1.69
HDAC6-210ENST00000441703 ADAMTSL4-AS1Q5T5F5 129 aa4.52□□□□□ -1.69
HDAC6-210ENST00000441703 Q5XG85 94 aa4.52□□□□□ -1.69
HDAC6-210ENST00000441703 EEF1AKMT3Q96AZ1 226 aa4.52□□□□□ -1.69
HDAC6-210ENST00000441703 C16orf92Q96LL3 132 aa4.52□□□□□ -1.69
HDAC6-210ENST00000441703 NDUFA12Q9UI09 145 aa4.52□□□□□ -1.69
HDAC6-210ENST00000441703 TRAV13-1A0A0B4J241 112 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 IGHV4-28A0A0C4DH34 117 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 KRTAP29-1A8MX34 341 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-210ENST00000441703 F8WDY8 70 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 GNRH2O43555 120 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 BCE1O60756 84 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 IGHV3-23P01764 117 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 SMR3BP02814 79 aaPredicted RBP4.51□□□□□ -1.69
HDAC6-210ENST00000441703 MIFP14174 115 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 TIRAPP58753 221 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 KRTAP10-2P60368 255 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 DAZ2Q13117 558 aaKnown RBP4.51□□□□□ -1.69
HDAC6-210ENST00000441703 CLEC19AQ6UXS0 136 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 UNQ9165/PRO28630Q6UXU0 137 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 DAZ4Q86SG3 579 aaKnown RBP4.51□□□□□ -1.69
HDAC6-210ENST00000441703 Q8NAQ8 132 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 VSIG2Q96IQ7 327 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 C20orf173Q96LM9 149 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 DAZ1Q9NQZ3 744 aaKnown RBP4.51□□□□□ -1.69
HDAC6-210ENST00000441703 DAZ3Q9NR90 486 aaKnown RBP4.51□□□□□ -1.69
HDAC6-210ENST00000441703 FAT1Q14517 4588 aa4.51□□□□□ -1.69
HDAC6-210ENST00000441703 NBDYA0A0U1RRE5 68 aa4.5□□□□□ -1.69
HDAC6-210ENST00000441703 M0QY20 66 aa4.5□□□□□ -1.69
HDAC6-210ENST00000441703 SOCS3O14543 225 aa4.5□□□□□ -1.69
HDAC6-210ENST00000441703 NDUFA1O15239 70 aa4.5□□□□□ -1.69
HDAC6-210ENST00000441703 CIRBPQ14011 172 aaKnown RBP4.5□□□□□ -1.69
HDAC6-210ENST00000441703 C4orf26Q17RF5 130 aa4.5□□□□□ -1.69
HDAC6-210ENST00000441703 C22orf24Q9Y442 160 aa4.5□□□□□ -1.69
HDAC6-210ENST00000441703 KLLNB2CW77 178 aa4.49□□□□□ -1.69
HDAC6-210ENST00000441703 F5H697 171 aa4.49□□□□□ -1.69
HDAC6-210ENST00000441703 OXTP01178 125 aa4.49□□□□□ -1.69
HDAC6-210ENST00000441703 MALP21145 153 aa4.49□□□□□ -1.69
HDAC6-210ENST00000441703 CMC4P56277 68 aaPredicted RBP4.49□□□□□ -1.69
HDAC6-210ENST00000441703 C9orf85Q96MD7 179 aa4.49□□□□□ -1.69
HDAC6-210ENST00000441703 OBSCN-AS1Q96MR7 158 aa4.49□□□□□ -1.69
HDAC6-210ENST00000441703 OPRPNQ99935 248 aaPredicted RBP4.49□□□□□ -1.69
HDAC6-210ENST00000441703 JPT2Q9H910 190 aa4.49□□□□□ -1.69
HDAC6-210ENST00000441703 PRO0628Q9UI54 55 aa4.49□□□□□ -1.69
HDAC6-210ENST00000441703 IGHV3-64A0A075B6Q5 118 aa4.48□□□□□ -1.69
HDAC6-210ENST00000441703 HRCT1Q6UXD1 115 aa4.48□□□□□ -1.69
HDAC6-210ENST00000441703 LINC00308Q8TCZ7 52 aa4.48□□□□□ -1.69
HDAC6-210ENST00000441703 FAM104AQ969W3 186 aa4.48□□□□□ -1.69
HDAC6-210ENST00000441703 CELA1Q9UNI1 258 aa4.48□□□□□ -1.69
HDAC6-210ENST00000441703 RNF213Q63HN8 5207 aa4.47□□□□□ -1.69
HDAC6-210ENST00000441703 TRAV12-2A0A075B6T6 113 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 242.5 ms