RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 MMP24-AS1A0A0U1RRL7 71 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 NAP1L6A6NFF2 107 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 IQCF6A8MYZ5 107 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 MIF4GDA9UHW6 222 aaKnown RBP-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 FAM25AB3EWG3 89 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 FAM25CB3EWG5 89 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 FAM25GB3EWG6 89 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 F6UZH7 168 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 J3QR89 54 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 M0QY20 66 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 HMGN4O00479 90 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 PDCD5O14737 125 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 NDUFC1O43677 76 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 SNAPC5O75971 98 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 CYB5AP00167 134 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 MT2AP02795 61 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 IGLC1P0CG04 106 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 DEFB130BP0DP73 79 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 DEFB130AP0DP74 79 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 RPS27P42677 84 aaKnown RBP-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 CCL18P55774 89 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 WHAMMP3Q1A5X7 153 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 DEFB136Q30KP8 78 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 MINOS1Q5TGZ0 78 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 MIC13Q5XKP0 118 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 MRPL54Q6P161 138 aaKnown RBP-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 MUSTN1Q8IVN3 82 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 MT1MQ8N339 61 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 KCNRGQ8N5I3 272 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 TSTD1Q8NFU3 115 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 LZICQ8WZA0 190 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 FAM167A-AS1Q96KT0 104 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 COPZ2Q9P299 210 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 KAAG1Q9UBP8 84 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 HIGD1AQ9Y241 93 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 MRC1P22897 1456 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 MBD5Q9P267 1494 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 RIMS1Q86UR5 1692 aaKnown RBP-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 ACACAQ13085 2346 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 ZMYM4Q5VZL5 1548 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 NBASA2RRP1 2371 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 PPLO60437 1756 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 CCNB3Q8WWL7 1395 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 ANKRD30AQ9BXX3 1397 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 USF3Q68DE3 2245 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 ANKRD11Q6UB99 2663 aaPredicted RBP-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 USP32Q8NFA0 1604 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 CICQ96RK0 1608 aaPredicted RBP-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 PRG4Q92954 1404 aaPredicted RBP-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 MGAM2Q2M2H8 2515 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 LRRK2Q5S007 2527 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 PIEZO2Q9H5I5 2752 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 KIF21AQ7Z4S6 1674 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 CHD8Q9HCK8 2581 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 MYH8P13535 1937 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 MRC2Q9UBG0 1479 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 C4AP0C0L4 1744 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 C4BP0C0L5 1744 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 CDC42BPAQ5VT25 1732 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 TIAM2Q8IVF5 1701 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 ARAP2Q8WZ64 1704 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 A0A096LNI7 61 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 LOC285095A0A1B0GVY8 99 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 hADV29S1A0JD25 119 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 C20orf202A1L168 122 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 D6R8Y8 96 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 H0Y9P7 68 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 H3BUA1 57 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 UQCRHP07919 91 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 C3orf79P0CE67 100 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 HMGA1P17096 107 aaKnown RBP-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 S100A1P23297 94 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 CBLN1P23435 193 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 CD52P31358 61 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 GUCA1AP43080 201 aaPredicted RBP-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 PEA15Q15121 130 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 PSMG4Q5JS54 123 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 COL5A1-AS1Q5SY13 56 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 RPS27LQ71UM5 84 aaKnown RBP-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 WFDC10BQ8IUB3 73 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 MMGT1Q8N4V1 131 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 TMEM263Q8WUH6 116 aaKnown RBP-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 LEAP2Q969E1 77 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 C20orf78Q9BR46 151 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 SMIM3Q9BZL3 60 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 MAP3K1Q13233 1512 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 MAGI3Q5TCQ9 1506 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 KDM3BQ7LBC6 1761 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 SCN11AQ9UI33 1791 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 PLXNC1O60486 1568 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 DIP2CQ9Y2E4 1556 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 BTAF1O14981 1849 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 SPEF2Q9C093 1822 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 DOCK11Q5JSL3 2073 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 PI4KAP42356 2102 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 PLIN4Q96Q06 1357 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 PTPN23Q9H3S7 1636 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 TMEM2Q9UHN6 1383 aa-0.2□□□□□ -2.44
PFDN4-202ENST00000441080 HECTD4Q9Y4D8 3996 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms