RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 IGLV10-54A0A075B6I4 117 aa9.43□□□□□ -0.9
HERPUD1-204ENST00000439977 TRAV13-2A0A0B4J235 113 aa9.43□□□□□ -0.9
HERPUD1-204ENST00000439977 A0A087WZ39 114 aa9.42□□□□□ -0.9
HERPUD1-204ENST00000439977 C9orf129Q5T035 196 aaKnown RBP9.42□□□□□ -0.9
HERPUD1-204ENST00000439977 PRR3P79522 188 aaKnown RBP9.42□□□□□ -0.9
HERPUD1-204ENST00000439977 DEFB121Q5J5C9 76 aa9.42□□□□□ -0.9
HERPUD1-204ENST00000439977 SMCR5Q8TEV8 140 aa9.42□□□□□ -0.9
HERPUD1-204ENST00000439977 SS18L2Q9UHA2 77 aa9.42□□□□□ -0.9
HERPUD1-204ENST00000439977 HILS1P60008 231 aa9.42□□□□□ -0.9
HERPUD1-204ENST00000439977 TRACP01848 142 aa9.41□□□□□ -0.9
HERPUD1-204ENST00000439977 SLPIP03973 132 aa9.41□□□□□ -0.9
HERPUD1-204ENST00000439977 FAM110AQ9BQ89 295 aa9.41□□□□□ -0.9
HERPUD1-204ENST00000439977 ATRQ13535 2644 aa9.4□□□□□ -0.9
HERPUD1-204ENST00000439977 RPL28P46779 137 aaKnown RBP9.4□□□□□ -0.9
HERPUD1-204ENST00000439977 FAM222AQ5U5X8 452 aa9.4□□□□□ -0.9
HERPUD1-204ENST00000439977 GAGE2AQ6NT46 116 aa9.4□□□□□ -0.9
HERPUD1-204ENST00000439977 DEFB135Q30KP9 77 aa9.39□□□□□ -0.91
HERPUD1-204ENST00000439977 X6R8D5 127 aa9.39□□□□□ -0.91
HERPUD1-204ENST00000439977 FAM240AA0A1B0GVK7 77 aa9.39□□□□□ -0.91
HERPUD1-204ENST00000439977 DNAL4O96015 105 aa9.38□□□□□ -0.91
HERPUD1-204ENST00000439977 LINC00269Q8N2A0 174 aa9.38□□□□□ -0.91
HERPUD1-204ENST00000439977 IBA57-AS1B1ANH7 110 aa9.38□□□□□ -0.91
HERPUD1-204ENST00000439977 LECT2O14960 151 aa9.38□□□□□ -0.91
HERPUD1-204ENST00000439977 MALP21145 153 aa9.38□□□□□ -0.91
HERPUD1-204ENST00000439977 C3orf56Q8N813 242 aa9.38□□□□□ -0.91
HERPUD1-204ENST00000439977 SS18Q15532 418 aa9.37□□□□□ -0.91
HERPUD1-204ENST00000439977 C9orf116Q5BN46 136 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-204ENST00000439977 C14orf132Q9NPU4 83 aa9.37□□□□□ -0.91
HERPUD1-204ENST00000439977 Q6Q795 121 aa9.36□□□□□ -0.91
HERPUD1-204ENST00000439977 PRO0255Q9UI72 69 aa9.36□□□□□ -0.91
HERPUD1-204ENST00000439977 HTN3P15516 51 aa9.36□□□□□ -0.91
HERPUD1-204ENST00000439977 KIR2DL5BQ8NHK3 375 aa9.36□□□□□ -0.91
HERPUD1-204ENST00000439977 LINC00526Q96FQ7 95 aa9.35□□□□□ -0.91
HERPUD1-204ENST00000439977 ANGP03950 147 aaKnown RBP9.35□□□□□ -0.91
HERPUD1-204ENST00000439977 FAM236AA0A1B0GUQ0 79 aa9.35□□□□□ -0.91
HERPUD1-204ENST00000439977 FAM236BA0A1B0GV22 79 aa9.35□□□□□ -0.91
HERPUD1-204ENST00000439977 NCR3O14931 201 aa9.34□□□□□ -0.91
HERPUD1-204ENST00000439977 MRPL23Q16540 153 aaKnown RBP9.32□□□□□ -0.92
HERPUD1-204ENST00000439977 ACYP1P07311 99 aa9.32□□□□□ -0.92
HERPUD1-204ENST00000439977 LINC00612Q8N6U2 182 aa9.32□□□□□ -0.92
HERPUD1-204ENST00000439977 LY6G6DO95868 133 aa9.32□□□□□ -0.92
HERPUD1-204ENST00000439977 CHCHD10Q8WYQ3 142 aaPredicted RBP9.32□□□□□ -0.92
HERPUD1-204ENST00000439977 TEP1Q99973 2627 aaKnown RBP9.31□□□□□ -0.92
HERPUD1-204ENST00000439977 TRBV7-7A0A0K0K1E9 115 aa9.31□□□□□ -0.92
HERPUD1-204ENST00000439977 A0A1B0GUV1 79 aa9.31□□□□□ -0.92
HERPUD1-204ENST00000439977 CELA1Q9UNI1 258 aa9.31□□□□□ -0.92
HERPUD1-204ENST00000439977 J3QKU1 62 aa9.3□□□□□ -0.92
HERPUD1-204ENST00000439977 INAFM2P0DMQ5 153 aa9.3□□□□□ -0.92
HERPUD1-204ENST00000439977 IGHV4-28A0A0C4DH34 117 aa9.3□□□□□ -0.92
HERPUD1-204ENST00000439977 INAFM1C9JVW0 142 aa9.3□□□□□ -0.92
HERPUD1-204ENST00000439977 REG3AQ06141 175 aa9.3□□□□□ -0.92
HERPUD1-204ENST00000439977 Q8IZM0 81 aa9.3□□□□□ -0.92
HERPUD1-204ENST00000439977 NSD1Q96L73 2696 aaPredicted RBP9.3□□□□□ -0.92
HERPUD1-204ENST00000439977 H0YGX0 51 aa9.29□□□□□ -0.92
HERPUD1-204ENST00000439977 DAD1P61803 113 aa9.29□□□□□ -0.92
HERPUD1-204ENST00000439977 LINC00643Q86TS7 51 aa9.29□□□□□ -0.92
HERPUD1-204ENST00000439977 C6orf223Q8N319 242 aa9.29□□□□□ -0.92
HERPUD1-204ENST00000439977 SVIPQ8NHG7 77 aa9.29□□□□□ -0.92
HERPUD1-204ENST00000439977 HIVEP1P15822 2718 aa9.29□□□□□ -0.92
HERPUD1-204ENST00000439977 CFAP161Q6P656 301 aa9.29□□□□□ -0.92
HERPUD1-204ENST00000439977 PPDPFQ9H3Y8 114 aa9.28□□□□□ -0.92
HERPUD1-204ENST00000439977 KIAA0087Q14695 138 aa9.28□□□□□ -0.92
HERPUD1-204ENST00000439977 SDIM1Q6ZPB5 146 aa9.28□□□□□ -0.92
HERPUD1-204ENST00000439977 Q8NDZ9 215 aa9.28□□□□□ -0.92
HERPUD1-204ENST00000439977 IGKV3D-7A0A0C4DH55 119 aa9.27□□□□□ -0.93
HERPUD1-204ENST00000439977 CD164L2Q6UWJ8 174 aa9.27□□□□□ -0.93
HERPUD1-204ENST00000439977 PKD1L1Q8TDX9 2849 aa9.27□□□□□ -0.93
HERPUD1-204ENST00000439977 NANOS2P60321 138 aaKnown RBP9.27□□□□□ -0.93
HERPUD1-204ENST00000439977 C10orf25Q5T742 122 aa9.27□□□□□ -0.93
HERPUD1-204ENST00000439977 LINC00846Q9NV44 126 aa9.26□□□□□ -0.93
HERPUD1-204ENST00000439977 SMIM9A6NGZ8 99 aa9.26□□□□□ -0.93
HERPUD1-204ENST00000439977 UNQ6190/PRO20217Q6UXQ8 127 aa9.25□□□□□ -0.93
HERPUD1-204ENST00000439977 LYRM9A8MSI8 78 aa9.25□□□□□ -0.93
HERPUD1-204ENST00000439977 C9orf66Q5T8R8 295 aa9.24□□□□□ -0.93
HERPUD1-204ENST00000439977 ORMDL1Q9P0S3 153 aa9.24□□□□□ -0.93
HERPUD1-204ENST00000439977 KLK12Q9UKR0 248 aa9.24□□□□□ -0.93
HERPUD1-204ENST00000439977 CXCL5P42830 114 aa9.23□□□□□ -0.93
HERPUD1-204ENST00000439977 C6orf99Q4VX62 202 aa9.23□□□□□ -0.93
HERPUD1-204ENST00000439977 KLK5Q9Y337 293 aaPredicted RBP9.23□□□□□ -0.93
HERPUD1-204ENST00000439977 A0A087WVE0 104 aa9.22□□□□□ -0.93
HERPUD1-204ENST00000439977 IMUPQ9GZP8 106 aa9.21□□□□□ -0.93
HERPUD1-204ENST00000439977 S100A7L2Q5SY68 101 aa9.21□□□□□ -0.93
HERPUD1-204ENST00000439977 Q8N814 137 aa9.21□□□□□ -0.93
HERPUD1-204ENST00000439977 Q8NAQ8 132 aa9.21□□□□□ -0.93
HERPUD1-204ENST00000439977 APOC4P55056 127 aa9.21□□□□□ -0.94
HERPUD1-204ENST00000439977 SPAG11BQ08648 103 aa9.21□□□□□ -0.94
HERPUD1-204ENST00000439977 TMEM126AQ9H061 195 aa9.2□□□□□ -0.94
HERPUD1-204ENST00000439977 CYSRT1A8MQ03 144 aa9.2□□□□□ -0.94
HERPUD1-204ENST00000439977 OBSCN-AS1Q96MR7 158 aa9.19□□□□□ -0.94
HERPUD1-204ENST00000439977 XAGE1AQ9HD64 81 aa9.19□□□□□ -0.94
HERPUD1-204ENST00000439977 IGHV4-30-4P0DP06 118 aa9.18□□□□□ -0.94
HERPUD1-204ENST00000439977 RPL18AQ02543 176 aaKnown RBP9.18□□□□□ -0.94
HERPUD1-204ENST00000439977 SPART-AS1P0CW21 52 aa9.18□□□□□ -0.94
HERPUD1-204ENST00000439977 SMIM20Q8N5G0 67 aa9.18□□□□□ -0.94
HERPUD1-204ENST00000439977 KMT2BQ9UMN6 2715 aaPredicted RBP9.18□□□□□ -0.94
HERPUD1-204ENST00000439977 LINC01561Q8N1V8 128 aa9.18□□□□□ -0.94
HERPUD1-204ENST00000439977 WFDC9Q8NEX5 89 aa9.18□□□□□ -0.94
HERPUD1-204ENST00000439977 COX17Q14061 63 aa9.17□□□□□ -0.94
HERPUD1-204ENST00000439977 C9orf153Q5TBE3 101 aa9.16□□□□□ -0.94
HERPUD1-204ENST00000439977 RETNQ9HD89 108 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms