RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 AMELXQ99217 191 aa8.75□□□□□ -1.01
TCOF1-205ENST00000439160 M0R2N4 97 aa8.74□□□□□ -1.01
TCOF1-205ENST00000439160 C14orf177Q52M58 125 aa8.74□□□□□ -1.01
TCOF1-205ENST00000439160 NDUFV3P56181 108 aaKnown RBP8.74□□□□□ -1.01
TCOF1-205ENST00000439160 FAM19A5Q7Z5A7 132 aaPredicted RBP8.74□□□□□ -1.01
TCOF1-205ENST00000439160 CYSRT1A8MQ03 144 aa8.74□□□□□ -1.01
TCOF1-205ENST00000439160 FRYQ5TBA9 3013 aa8.73□□□□□ -1.01
TCOF1-205ENST00000439160 NREPQ16612 68 aa8.73□□□□□ -1.01
TCOF1-205ENST00000439160 UNQ6190/PRO20217Q6UXQ8 127 aa8.73□□□□□ -1.01
TCOF1-205ENST00000439160 Q9UF83 564 aa8.73□□□□□ -1.01
TCOF1-205ENST00000439160 FREM2Q5SZK8 3169 aa8.73□□□□□ -1.01
TCOF1-205ENST00000439160 IGKV2-28A0A075B6P5 120 aa8.73□□□□□ -1.01
TCOF1-205ENST00000439160 A0A1B0GX51 115 aa8.73□□□□□ -1.01
TCOF1-205ENST00000439160 IGKV2D-28P01615 120 aa8.73□□□□□ -1.01
TCOF1-205ENST00000439160 C9orf116Q5BN46 136 aaPredicted RBP8.73□□□□□ -1.01
TCOF1-205ENST00000439160 TNRC18O15417 2968 aaPredicted RBP8.72□□□□□ -1.01
TCOF1-205ENST00000439160 Q8IZM0 81 aa8.72□□□□□ -1.01
TCOF1-205ENST00000439160 CSDC2Q9Y534 153 aaKnown RBP8.71□□□□□ -1.01
TCOF1-205ENST00000439160 DMDP11532 3685 aa8.71□□□□□ -1.01
TCOF1-205ENST00000439160 A0A087WZ39 114 aa8.71□□□□□ -1.01
TCOF1-205ENST00000439160 A0A096LNI7 61 aa8.71□□□□□ -1.02
TCOF1-205ENST00000439160 ADAMTSL4-AS1Q5T5F5 129 aa8.71□□□□□ -1.02
TCOF1-205ENST00000439160 CITED1Q99966 193 aa8.71□□□□□ -1.02
TCOF1-205ENST00000439160 KLK9Q2XQG4 91 aa8.7□□□□□ -1.02
TCOF1-205ENST00000439160 SMIM11BQ8TCY0 68 aa8.7□□□□□ -1.02
TCOF1-205ENST00000439160 A0A096LNT2 108 aa8.69□□□□□ -1.02
TCOF1-205ENST00000439160 H3BQ85 93 aa8.69□□□□□ -1.02
TCOF1-205ENST00000439160 FAM19A1Q7Z5A9 133 aa8.69□□□□□ -1.02
TCOF1-205ENST00000439160 IGSF10Q6WRI0 2623 aa8.68□□□□□ -1.02
TCOF1-205ENST00000439160 CELA1Q9UNI1 258 aa8.68□□□□□ -1.02
TCOF1-205ENST00000439160 TRAV23DV6A0A075B6W5 121 aa8.68□□□□□ -1.02
TCOF1-205ENST00000439160 BOD1L1Q8NFC6 3051 aa8.68□□□□□ -1.02
TCOF1-205ENST00000439160 Q6ZQY7 126 aa8.68□□□□□ -1.02
TCOF1-205ENST00000439160 LST1O00453 97 aa8.67□□□□□ -1.02
TCOF1-205ENST00000439160 WFDC10BQ8IUB3 73 aa8.67□□□□□ -1.02
TCOF1-205ENST00000439160 LINC00643Q86TS7 51 aa8.67□□□□□ -1.02
TCOF1-205ENST00000439160 PRR3P79522 188 aaKnown RBP8.67□□□□□ -1.02
TCOF1-205ENST00000439160 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
TCOF1-205ENST00000439160 CHD6Q8TD26 2715 aa8.66□□□□□ -1.02
TCOF1-205ENST00000439160 RPL37AP8A6NKH3 93 aa8.65□□□□□ -1.02
TCOF1-205ENST00000439160 NDUFS5O43920 106 aa8.65□□□□□ -1.02
TCOF1-205ENST00000439160 KRTAP24-1Q3LI83 254 aa8.65□□□□□ -1.02
TCOF1-205ENST00000439160 LYPD5Q6UWN5 251 aa8.65□□□□□ -1.02
TCOF1-205ENST00000439160 SDIM1Q6ZPB5 146 aa8.65□□□□□ -1.02
TCOF1-205ENST00000439160 A0A1B0GUV1 79 aa8.65□□□□□ -1.03
TCOF1-205ENST00000439160 ATOX1O00244 68 aa8.65□□□□□ -1.03
TCOF1-205ENST00000439160 COX17Q14061 63 aa8.65□□□□□ -1.03
TCOF1-205ENST00000439160 ASPMQ8IZT6 3477 aa8.64□□□□□ -1.03
TCOF1-205ENST00000439160 PDE6GP18545 87 aa8.64□□□□□ -1.03
TCOF1-205ENST00000439160 B9D2Q9BPU9 175 aa8.64□□□□□ -1.03
TCOF1-205ENST00000439160 M0R378 163 aa8.64□□□□□ -1.03
TCOF1-205ENST00000439160 C6orf223Q8N319 242 aa8.64□□□□□ -1.03
TCOF1-205ENST00000439160 LY6G6CO95867 125 aa8.63□□□□□ -1.03
TCOF1-205ENST00000439160 CCDC179H3BU77 68 aa8.63□□□□□ -1.03
TCOF1-205ENST00000439160 LINC01546A6NGU7 62 aa8.62□□□□□ -1.03
TCOF1-205ENST00000439160 X6R8D5 127 aa8.62□□□□□ -1.03
TCOF1-205ENST00000439160 NBEAQ8NFP9 2946 aa8.62□□□□□ -1.03
TCOF1-205ENST00000439160 TEX15Q9BXT5 2789 aa8.62□□□□□ -1.03
TCOF1-205ENST00000439160 ZNF73O43830 326 aaPredicted RBP8.61□□□□□ -1.03
TCOF1-205ENST00000439160 FLNCQ14315 2725 aa8.61□□□□□ -1.03
TCOF1-205ENST00000439160 ATMQ13315 3056 aa8.61□□□□□ -1.03
TCOF1-205ENST00000439160 LRCOL1A6NCL2 159 aa8.61□□□□□ -1.03
TCOF1-205ENST00000439160 NDUFB1O75438 58 aa8.6□□□□□ -1.03
TCOF1-205ENST00000439160 EGFEM1PQ0D2K5 195 aa8.6□□□□□ -1.03
TCOF1-205ENST00000439160 SCXQ7RTU7 201 aa8.6□□□□□ -1.03
TCOF1-205ENST00000439160 SETXQ7Z333 2677 aaKnown RBP8.6□□□□□ -1.03
TCOF1-205ENST00000439160 USP17L23D6RBM5 183 aa8.59□□□□□ -1.03
TCOF1-205ENST00000439160 PPDPFQ9H3Y8 114 aa8.59□□□□□ -1.03
TCOF1-205ENST00000439160 STAB1Q9NY15 2570 aa8.59□□□□□ -1.03
TCOF1-205ENST00000439160 DMXL2Q8TDJ6 3036 aa8.59□□□□□ -1.03
TCOF1-205ENST00000439160 LOC107984640A0A0U1RRK4 108 aa8.59□□□□□ -1.03
TCOF1-205ENST00000439160 CCKP06307 115 aa8.59□□□□□ -1.03
TCOF1-205ENST00000439160 TRBV10-3A0A0K0K1G6 114 aa8.59□□□□□ -1.03
TCOF1-205ENST00000439160 BPY2O14599 106 aa8.58□□□□□ -1.04
TCOF1-205ENST00000439160 IGHV3OR16-9A0A0B4J2B5 98 aa8.58□□□□□ -1.04
TCOF1-205ENST00000439160 UNC79Q9P2D8 2635 aa8.58□□□□□ -1.04
TCOF1-205ENST00000439160 ADGRG4Q8IZF6 3080 aa8.57□□□□□ -1.04
TCOF1-205ENST00000439160 H0Y9J4 135 aa8.57□□□□□ -1.04
TCOF1-205ENST00000439160 C3orf84H3BNL1 204 aa8.57□□□□□ -1.04
TCOF1-205ENST00000439160 MUC7Q8TAX7 377 aa8.56□□□□□ -1.04
TCOF1-205ENST00000439160 RPL28P46779 137 aaKnown RBP8.56□□□□□ -1.04
TCOF1-205ENST00000439160 UPK3BQ9BT76 320 aa8.56□□□□□ -1.04
TCOF1-205ENST00000439160 J3KT08 172 aa8.55□□□□□ -1.04
TCOF1-205ENST00000439160 IGLV5-39A0A0G2JS06 123 aa8.55□□□□□ -1.04
TCOF1-205ENST00000439160 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
TCOF1-205ENST00000439160 UQCRQO14949 82 aa8.55□□□□□ -1.04
TCOF1-205ENST00000439160 SMCPP49901 116 aaPredicted RBP8.55□□□□□ -1.04
TCOF1-205ENST00000439160 C4orf48Q5BLP8 95 aa8.55□□□□□ -1.04
TCOF1-205ENST00000439160 CDIP1Q9H305 208 aa8.55□□□□□ -1.04
TCOF1-205ENST00000439160 COL6A5A8TX70 2615 aa8.55□□□□□ -1.04
TCOF1-205ENST00000439160 LOC400499M0QZD8 3231 aa8.55□□□□□ -1.04
TCOF1-205ENST00000439160 COL12A1Q99715 3063 aa8.55□□□□□ -1.04
TCOF1-205ENST00000439160 KRTAP1-3Q8IUG1 177 aa8.55□□□□□ -1.04
TCOF1-205ENST00000439160 ENHOQ6UWT2 76 aa8.54□□□□□ -1.04
TCOF1-205ENST00000439160 C20orf197Q8N268 126 aa8.54□□□□□ -1.04
TCOF1-205ENST00000439160 ESRGQ1W209 222 aa8.54□□□□□ -1.04
TCOF1-205ENST00000439160 SBSPONQ8IVN8 264 aa8.54□□□□□ -1.04
TCOF1-205ENST00000439160 Q8N3U1 123 aa8.54□□□□□ -1.04
TCOF1-205ENST00000439160 A0A087WYN8 130 aa8.53□□□□□ -1.04
TCOF1-205ENST00000439160 WDFY3Q8IZQ1 3526 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms