RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 LINC00959A0A1B0GUT2 108 aa6.01□□□□□ -1.45
AC011228.1-201ENST00000439027 F8VRH5 84 aa6.01□□□□□ -1.45
AC011228.1-201ENST00000439027 DPM2O94777 84 aa6.01□□□□□ -1.45
AC011228.1-201ENST00000439027 CRPP02741 224 aa6.01□□□□□ -1.45
AC011228.1-201ENST00000439027 SS18Q15532 418 aa6.01□□□□□ -1.45
AC011228.1-201ENST00000439027 SCXQ7RTU7 201 aa6.01□□□□□ -1.45
AC011228.1-201ENST00000439027 PRR34Q9NV39 138 aa6.01□□□□□ -1.45
AC011228.1-201ENST00000439027 IGLV4-69A0A075B6H9 119 aa6□□□□□ -1.45
AC011228.1-201ENST00000439027 TINCRA0A1B0GVN0 87 aa6□□□□□ -1.45
AC011228.1-201ENST00000439027 JOSD1Q15040 202 aaPredicted RBP6□□□□□ -1.45
AC011228.1-201ENST00000439027 LINC00242Q5T6M2 205 aa6□□□□□ -1.45
AC011228.1-201ENST00000439027 ATOH7Q8N100 152 aa6□□□□□ -1.45
AC011228.1-201ENST00000439027 CHAC1Q9BUX1 264 aa6□□□□□ -1.45
AC011228.1-201ENST00000439027 C1orf43Q9BWL3 253 aa6□□□□□ -1.45
AC011228.1-201ENST00000439027 PLA2G2DQ9UNK4 145 aa6□□□□□ -1.45
AC011228.1-201ENST00000439027 UBR4Q5T4S7 5183 aa5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 C11orf86A6NJI1 115 aa5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 CCL25O15444 150 aa5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 IGKCP01834 107 aa5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 IGLC3P0DOY3 106 aa5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 PLNP26678 52 aa5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 XCL1P47992 114 aa5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 COX6A2Q02221 97 aa5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 MIAQ16674 131 aa5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 C14orf177Q52M58 125 aa5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 PYY3Q5JQD4 70 aa5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 CHCHD10Q8WYQ3 142 aaPredicted RBP5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 GEMIN7Q9H840 131 aaKnown RBP5.99□□□□□ -1.45
AC011228.1-201ENST00000439027 TRAV8-4A0A0B4J246 113 aa5.98□□□□□ -1.45
AC011228.1-201ENST00000439027 KRTAP29-1A8MX34 341 aaPredicted RBP5.98□□□□□ -1.45
AC011228.1-201ENST00000439027 HERVK_113P63121 156 aa5.98□□□□□ -1.45
AC011228.1-201ENST00000439027 SEC11AP67812 179 aa5.98□□□□□ -1.45
AC011228.1-201ENST00000439027 TMEM170BQ5T4T1 132 aa5.98□□□□□ -1.45
AC011228.1-201ENST00000439027 FAM19A3Q7Z5A8 133 aa5.98□□□□□ -1.45
AC011228.1-201ENST00000439027 LINC00469Q8N7U9 141 aa5.98□□□□□ -1.45
AC011228.1-201ENST00000439027 GAGE12HA6NDE8 117 aa5.97□□□□□ -1.45
AC011228.1-201ENST00000439027 ZNF22P17026 224 aaPredicted RBP5.97□□□□□ -1.45
AC011228.1-201ENST00000439027 CD164L2Q6UWJ8 174 aa5.97□□□□□ -1.45
AC011228.1-201ENST00000439027 CIRBP-AS1Q8TBR5 109 aa5.97□□□□□ -1.45
AC011228.1-201ENST00000439027 CDKN2A-AS1Q9UH64 79 aa5.97□□□□□ -1.45
AC011228.1-201ENST00000439027 LRP1Q07954 4544 aaKnown RBP5.96□□□□□ -1.45
AC011228.1-201ENST00000439027 IGHV3OR16-9A0A0B4J2B5 98 aa5.96□□□□□ -1.46
AC011228.1-201ENST00000439027 USP17L23D6RBM5 183 aa5.96□□□□□ -1.46
AC011228.1-201ENST00000439027 FOXI1Q12951 378 aa5.96□□□□□ -1.46
AC011228.1-201ENST00000439027 C5orf38Q86SI9 138 aa5.96□□□□□ -1.46
AC011228.1-201ENST00000439027 STPG4Q8N801 248 aa5.96□□□□□ -1.46
AC011228.1-201ENST00000439027 IGLV5-45A0A087WSX0 123 aa5.95□□□□□ -1.46
AC011228.1-201ENST00000439027 hDV102S1A0JD36 115 aa5.95□□□□□ -1.46
AC011228.1-201ENST00000439027 H3BRM9 83 aa5.95□□□□□ -1.46
AC011228.1-201ENST00000439027 COX7A2LO14548 114 aa5.95□□□□□ -1.46
AC011228.1-201ENST00000439027 MAJINQ3KP22 176 aa5.95□□□□□ -1.46
AC011228.1-201ENST00000439027 KRTAP26-1Q6PEX3 210 aa5.95□□□□□ -1.46
AC011228.1-201ENST00000439027 PKHD1L1Q86WI1 4243 aa5.95□□□□□ -1.46
AC011228.1-201ENST00000439027 FAT3Q8TDW7 4589 aa5.95□□□□□ -1.46
AC011228.1-201ENST00000439027 A0A087WZ39 114 aa5.94□□□□□ -1.46
AC011228.1-201ENST00000439027 TMEM223A0PJW6 202 aa5.94□□□□□ -1.46
AC011228.1-201ENST00000439027 HSBP1L1C9JCN9 74 aa5.94□□□□□ -1.46
AC011228.1-201ENST00000439027 SPINK8P0C7L1 97 aa5.94□□□□□ -1.46
AC011228.1-201ENST00000439027 SMIM6P0DI80 62 aa5.94□□□□□ -1.46
AC011228.1-201ENST00000439027 VAMP8Q9BV40 100 aa5.94□□□□□ -1.46
AC011228.1-201ENST00000439027 IGHV3-64A0A075B6Q5 118 aa5.93□□□□□ -1.46
AC011228.1-201ENST00000439027 MALP21145 153 aa5.93□□□□□ -1.46
AC011228.1-201ENST00000439027 KRTAP10-4P60372 401 aaPredicted RBP5.93□□□□□ -1.46
AC011228.1-201ENST00000439027 RPL37AP61513 92 aaKnown RBP5.93□□□□□ -1.46
AC011228.1-201ENST00000439027 HERVK_113P61574 105 aa5.93□□□□□ -1.46
AC011228.1-201ENST00000439027 SMIM1B2RUZ4 78 aa5.92□□□□□ -1.46
AC011228.1-201ENST00000439027 OXTP01178 125 aa5.92□□□□□ -1.46
AC011228.1-201ENST00000439027 S100A12P80511 92 aa5.92□□□□□ -1.46
AC011228.1-201ENST00000439027 SERTAD4-AS1Q5TG53 156 aa5.92□□□□□ -1.46
AC011228.1-201ENST00000439027 KRTAP4-2Q9BYR5 136 aa5.92□□□□□ -1.46
AC011228.1-201ENST00000439027 PAM16Q9Y3D7 125 aa5.92□□□□□ -1.46
AC011228.1-201ENST00000439027 HMCN2Q8NDA2 5059 aa5.91□□□□□ -1.46
AC011228.1-201ENST00000439027 IGHV1-58A0A0C4DH39 117 aa5.91□□□□□ -1.46
AC011228.1-201ENST00000439027 LEPROTO15243 131 aa5.91□□□□□ -1.46
AC011228.1-201ENST00000439027 SPATA45Q537H7 98 aa5.91□□□□□ -1.46
AC011228.1-201ENST00000439027 LINC01561Q8N1V8 128 aa5.91□□□□□ -1.46
AC011228.1-201ENST00000439027 C9orf163Q8N9P6 203 aa5.91□□□□□ -1.46
AC011228.1-201ENST00000439027 DPH3Q96FX2 82 aa5.91□□□□□ -1.46
AC011228.1-201ENST00000439027 C12orf57Q99622 126 aa5.91□□□□□ -1.46
AC011228.1-201ENST00000439027 TOMM7Q9P0U1 55 aa5.91□□□□□ -1.46
AC011228.1-201ENST00000439027 IGKV2D-26A0A0A0MRZ7 120 aa5.9□□□□□ -1.46
AC011228.1-201ENST00000439027 IGLV5-39A0A0G2JS06 123 aa5.9□□□□□ -1.46
AC011228.1-201ENST00000439027 E9PLD3 99 aa5.9□□□□□ -1.46
AC011228.1-201ENST00000439027 APOMO95445 188 aa5.9□□□□□ -1.46
AC011228.1-201ENST00000439027 NMUP48645 174 aa5.9□□□□□ -1.46
AC011228.1-201ENST00000439027 LINC00518Q8N0U6 118 aa5.9□□□□□ -1.46
AC011228.1-201ENST00000439027 ORAOV1Q8WV07 137 aa5.9□□□□□ -1.46
AC011228.1-201ENST00000439027 PLEKHB2Q96CS7 222 aa5.9□□□□□ -1.46
AC011228.1-201ENST00000439027 J3QQQ9 107 aa5.89□□□□□ -1.47
AC011228.1-201ENST00000439027 PRSS2P07478 247 aa5.89□□□□□ -1.47
AC011228.1-201ENST00000439027 LGALS3P17931 250 aaKnown RBP5.89□□□□□ -1.47
AC011228.1-201ENST00000439027 C6orf226Q5I0X4 101 aa5.89□□□□□ -1.47
AC011228.1-201ENST00000439027 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
AC011228.1-201ENST00000439027 COX7B2Q8TF08 81 aa5.89□□□□□ -1.47
AC011228.1-201ENST00000439027 KRTAP9-3Q9BYQ3 159 aa5.89□□□□□ -1.47
AC011228.1-201ENST00000439027 KRTAP4-11Q9BYQ6 195 aa5.89□□□□□ -1.47
AC011228.1-201ENST00000439027 PANO1I0J062 215 aa5.88□□□□□ -1.47
AC011228.1-201ENST00000439027 HNRNPA3P51991 378 aaKnown RBP5.88□□□□□ -1.47
AC011228.1-201ENST00000439027 TSPEAR-AS2P59090 65 aa5.88□□□□□ -1.47
AC011228.1-201ENST00000439027 SPAG11BQ08648 103 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms