RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 CCKP06307 115 aa4.73□□□□□ -1.65
CSDE1-205ENST00000438362 FAM110AQ9BQ89 295 aa4.73□□□□□ -1.65
CSDE1-205ENST00000438362 TMEM258P61165 79 aa4.72□□□□□ -1.65
CSDE1-205ENST00000438362 LELP1Q5T871 98 aa4.72□□□□□ -1.65
CSDE1-205ENST00000438362 ZNF292O60281 2723 aa4.72□□□□□ -1.65
CSDE1-205ENST00000438362 IGHV3OR16-9A0A0B4J2B5 98 aa4.72□□□□□ -1.65
CSDE1-205ENST00000438362 PRR3P79522 188 aaKnown RBP4.72□□□□□ -1.65
CSDE1-205ENST00000438362 FHL3Q13643 280 aa4.72□□□□□ -1.65
CSDE1-205ENST00000438362 Q8N814 137 aa4.72□□□□□ -1.65
CSDE1-205ENST00000438362 MUC7Q8TAX7 377 aa4.72□□□□□ -1.65
CSDE1-205ENST00000438362 KLK5Q9Y337 293 aaPredicted RBP4.72□□□□□ -1.65
CSDE1-205ENST00000438362 A0A087WVE0 104 aa4.72□□□□□ -1.65
CSDE1-205ENST00000438362 A0A1B0GUV1 79 aa4.72□□□□□ -1.65
CSDE1-205ENST00000438362 PLA2G2AP14555 144 aa4.72□□□□□ -1.65
CSDE1-205ENST00000438362 UNQ6190/PRO20217Q6UXQ8 127 aa4.72□□□□□ -1.65
CSDE1-205ENST00000438362 CYSRT1A8MQ03 144 aa4.71□□□□□ -1.66
CSDE1-205ENST00000438362 C9orf116Q5BN46 136 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-205ENST00000438362 EPG5Q9HCE0 2579 aa4.71□□□□□ -1.66
CSDE1-205ENST00000438362 MUC3AQ02505 3323 aa4.71□□□□□ -1.66
CSDE1-205ENST00000438362 SCXQ7RTU7 201 aa4.71□□□□□ -1.66
CSDE1-205ENST00000438362 NDUFC2O95298 119 aa4.71□□□□□ -1.66
CSDE1-205ENST00000438362 LINC00846Q9NV44 126 aa4.71□□□□□ -1.66
CSDE1-205ENST00000438362 BPY2O14599 106 aa4.7□□□□□ -1.66
CSDE1-205ENST00000438362 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-205ENST00000438362 WFDC9Q8NEX5 89 aa4.7□□□□□ -1.66
CSDE1-205ENST00000438362 FAM236DA0A1B0GTK5 79 aa4.7□□□□□ -1.66
CSDE1-205ENST00000438362 FAM236CP0DP71 79 aa4.7□□□□□ -1.66
CSDE1-205ENST00000438362 FAM218AQ96MZ4 157 aa4.7□□□□□ -1.66
CSDE1-205ENST00000438362 FRYQ5TBA9 3013 aa4.7□□□□□ -1.66
CSDE1-205ENST00000438362 A8MTW9 85 aa4.7□□□□□ -1.66
CSDE1-205ENST00000438362 FRYLO94915 3013 aa4.7□□□□□ -1.66
CSDE1-205ENST00000438362 REV3LO60673 3130 aa4.69□□□□□ -1.66
CSDE1-205ENST00000438362 C16orf95Q9H693 158 aa4.69□□□□□ -1.66
CSDE1-205ENST00000438362 SPEGQ15772 3267 aa4.69□□□□□ -1.66
CSDE1-205ENST00000438362 ZNF73O43830 326 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-205ENST00000438362 EIF4EBP3O60516 100 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-205ENST00000438362 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-205ENST00000438362 LINC01561Q8N1V8 128 aa4.68□□□□□ -1.66
CSDE1-205ENST00000438362 INAFM1C9JVW0 142 aa4.68□□□□□ -1.66
CSDE1-205ENST00000438362 M0R378 163 aa4.68□□□□□ -1.66
CSDE1-205ENST00000438362 FSHBP01225 129 aa4.68□□□□□ -1.66
CSDE1-205ENST00000438362 SYCNQ0VAF6 134 aa4.68□□□□□ -1.66
CSDE1-205ENST00000438362 TRBV10-3A0A0K0K1G6 114 aa4.67□□□□□ -1.66
CSDE1-205ENST00000438362 KPRPQ5T749 579 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-205ENST00000438362 C11orf45Q8TAV5 145 aa4.67□□□□□ -1.66
CSDE1-205ENST00000438362 MRAPQ8TCY5 172 aa4.67□□□□□ -1.66
CSDE1-205ENST00000438362 CENPEQ02224 2701 aa4.67□□□□□ -1.66
CSDE1-205ENST00000438362 CDK2AP2O75956 126 aa4.67□□□□□ -1.66
CSDE1-205ENST00000438362 DEFB131BA0A096LNP1 70 aa4.67□□□□□ -1.66
CSDE1-205ENST00000438362 LY6G6DO95868 133 aa4.66□□□□□ -1.66
CSDE1-205ENST00000438362 LINC00575Q6W349 94 aa4.66□□□□□ -1.66
CSDE1-205ENST00000438362 IGKV2-28A0A075B6P5 120 aa4.66□□□□□ -1.66
CSDE1-205ENST00000438362 IGKV2D-28P01615 120 aa4.66□□□□□ -1.66
CSDE1-205ENST00000438362 C5orf47Q569G3 176 aa4.66□□□□□ -1.66
CSDE1-205ENST00000438362 FAM19A1Q7Z5A9 133 aa4.66□□□□□ -1.66
CSDE1-205ENST00000438362 C6orf223Q8N319 242 aa4.66□□□□□ -1.66
CSDE1-205ENST00000438362 SNURFQ9Y675 71 aa4.65□□□□□ -1.66
CSDE1-205ENST00000438362 FASNP49327 2511 aaKnown RBP4.65□□□□□ -1.66
CSDE1-205ENST00000438362 TRAV7A0A075B6U4 112 aa4.65□□□□□ -1.66
CSDE1-205ENST00000438362 C3orf84H3BNL1 204 aa4.65□□□□□ -1.66
CSDE1-205ENST00000438362 EGFEM1PQ0D2K5 195 aa4.65□□□□□ -1.66
CSDE1-205ENST00000438362 IGHV4-30-4P0DP06 118 aa4.65□□□□□ -1.67
CSDE1-205ENST00000438362 FAM19A3Q7Z5A8 133 aa4.65□□□□□ -1.67
CSDE1-205ENST00000438362 NDUFC1O43677 76 aa4.64□□□□□ -1.67
CSDE1-205ENST00000438362 NHLRC4P0CG21 123 aaPredicted RBP4.64□□□□□ -1.67
CSDE1-205ENST00000438362 MP68P56378 58 aa4.64□□□□□ -1.67
CSDE1-205ENST00000438362 SMR3AQ99954 134 aa4.64□□□□□ -1.67
CSDE1-205ENST00000438362 AKAP13Q12802 2813 aa4.64□□□□□ -1.67
CSDE1-205ENST00000438362 PPDPFQ9H3Y8 114 aa4.64□□□□□ -1.67
CSDE1-205ENST00000438362 EYSQ5T1H1 3165 aa4.64□□□□□ -1.67
CSDE1-205ENST00000438362 CRYGAP11844 174 aa4.63□□□□□ -1.67
CSDE1-205ENST00000438362 J3QL48 77 aa4.63□□□□□ -1.67
CSDE1-205ENST00000438362 A0A096LNT2 108 aa4.63□□□□□ -1.67
CSDE1-205ENST00000438362 Q6ZVQ6 151 aa4.63□□□□□ -1.67
CSDE1-205ENST00000438362 FAM19A5Q7Z5A7 132 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-205ENST00000438362 Q8N3U1 123 aa4.62□□□□□ -1.67
CSDE1-205ENST00000438362 SMCR5Q8TEV8 140 aa4.62□□□□□ -1.67
CSDE1-205ENST00000438362 DHRS4-AS1Q9P1J3 65 aa4.62□□□□□ -1.67
CSDE1-205ENST00000438362 IGKV2-24A0A0C4DH68 120 aa4.62□□□□□ -1.67
CSDE1-205ENST00000438362 LOC107984640A0A0U1RRK4 108 aa4.62□□□□□ -1.67
CSDE1-205ENST00000438362 HIGD2AQ9BW72 106 aa4.62□□□□□ -1.67
CSDE1-205ENST00000438362 MAP1AP78559 2803 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-205ENST00000438362 NDUFC2-KCTD14E9PQ53 114 aa4.62□□□□□ -1.67
CSDE1-205ENST00000438362 ATP5EP56381 51 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-205ENST00000438362 LINC01547P58512 204 aaPredicted RBP4.61□□□□□ -1.67
CSDE1-205ENST00000438362 IL17DQ8TAD2 202 aa4.61□□□□□ -1.67
CSDE1-205ENST00000438362 X6R8D5 127 aa4.61□□□□□ -1.67
CSDE1-205ENST00000438362 LYPD5Q6UWN5 251 aa4.61□□□□□ -1.67
CSDE1-205ENST00000438362 PKIGQ9Y2B9 76 aa4.61□□□□□ -1.67
CSDE1-205ENST00000438362 COL6A3P12111 3177 aa4.61□□□□□ -1.67
CSDE1-205ENST00000438362 PRB2P02812 416 aaPredicted RBP4.61□□□□□ -1.67
CSDE1-205ENST00000438362 UBE2AP49459 152 aa4.61□□□□□ -1.67
CSDE1-205ENST00000438362 RPL37AP8A6NKH3 93 aa4.6□□□□□ -1.67
CSDE1-205ENST00000438362 NDUFB1O75438 58 aa4.6□□□□□ -1.67
CSDE1-205ENST00000438362 OXLD1Q5BKU9 147 aa4.6□□□□□ -1.67
CSDE1-205ENST00000438362 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
CSDE1-205ENST00000438362 ADGRG4Q8IZF6 3080 aa4.6□□□□□ -1.67
CSDE1-205ENST00000438362 LINC01600Q96MT4 127 aa4.6□□□□□ -1.67
CSDE1-205ENST00000438362 BOD1L1Q8NFC6 3051 aa4.6□□□□□ -1.67
CSDE1-205ENST00000438362 C10orf25Q5T742 122 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms