RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 LINC00308Q8TCZ7 52 aa7.35□□□□□ -1.23
CLSTN1-203ENST00000435891 INAFM2P0DMQ5 153 aa7.35□□□□□ -1.23
CLSTN1-203ENST00000435891 TIMM17BO60830 172 aa7.34□□□□□ -1.23
CLSTN1-203ENST00000435891 OXTP01178 125 aa7.34□□□□□ -1.23
CLSTN1-203ENST00000435891 C20orf197Q8N268 126 aa7.34□□□□□ -1.23
CLSTN1-203ENST00000435891 IGKV3OR2-268A0A0C4DH90 116 aa7.34□□□□□ -1.23
CLSTN1-203ENST00000435891 USP17L23D6RBM5 183 aa7.34□□□□□ -1.23
CLSTN1-203ENST00000435891 RNASE1P07998 156 aaKnown RBP7.34□□□□□ -1.23
CLSTN1-203ENST00000435891 C14orf132Q9NPU4 83 aa7.34□□□□□ -1.23
CLSTN1-203ENST00000435891 FAM19A3Q7Z5A8 133 aa7.33□□□□□ -1.24
CLSTN1-203ENST00000435891 PRIMA1Q86XR5 153 aa7.33□□□□□ -1.24
CLSTN1-203ENST00000435891 SMR3AQ99954 134 aa7.33□□□□□ -1.24
CLSTN1-203ENST00000435891 HECTD1Q9ULT8 2610 aa7.33□□□□□ -1.24
CLSTN1-203ENST00000435891 BRK1Q8WUW1 75 aa7.33□□□□□ -1.24
CLSTN1-203ENST00000435891 C2orf48Q96LS8 159 aa7.33□□□□□ -1.24
CLSTN1-203ENST00000435891 OTOGQ6ZRI0 2925 aa7.33□□□□□ -1.24
CLSTN1-203ENST00000435891 LINC00336Q6ZUF6 198 aa7.33□□□□□ -1.24
CLSTN1-203ENST00000435891 C16orf74Q96GX8 76 aa7.33□□□□□ -1.24
CLSTN1-203ENST00000435891 TENM1Q9UKZ4 2725 aa7.32□□□□□ -1.24
CLSTN1-203ENST00000435891 IGLV4-60A0A075B6I1 120 aa7.32□□□□□ -1.24
CLSTN1-203ENST00000435891 TRAV23DV6A0A075B6W5 121 aa7.32□□□□□ -1.24
CLSTN1-203ENST00000435891 CXCL5P42830 114 aa7.32□□□□□ -1.24
CLSTN1-203ENST00000435891 C16orf95Q9H693 158 aa7.32□□□□□ -1.24
CLSTN1-203ENST00000435891 FAM236DA0A1B0GTK5 79 aa7.32□□□□□ -1.24
CLSTN1-203ENST00000435891 UBE2L6O14933 153 aa7.32□□□□□ -1.24
CLSTN1-203ENST00000435891 FAM236CP0DP71 79 aa7.32□□□□□ -1.24
CLSTN1-203ENST00000435891 TRGV4A0A0C4DH28 118 aa7.31□□□□□ -1.24
CLSTN1-203ENST00000435891 KRTAP10-3P60369 221 aa7.31□□□□□ -1.24
CLSTN1-203ENST00000435891 PRO0628Q9UI54 55 aa7.31□□□□□ -1.24
CLSTN1-203ENST00000435891 WFDC9Q8NEX5 89 aa7.31□□□□□ -1.24
CLSTN1-203ENST00000435891 COX7A2LO14548 114 aa7.3□□□□□ -1.24
CLSTN1-203ENST00000435891 GHRHP01286 108 aa7.3□□□□□ -1.24
CLSTN1-203ENST00000435891 MALP21145 153 aa7.3□□□□□ -1.24
CLSTN1-203ENST00000435891 FHL2Q14192 279 aa7.3□□□□□ -1.24
CLSTN1-203ENST00000435891 DEFB121Q5J5C9 76 aa7.3□□□□□ -1.24
CLSTN1-203ENST00000435891 TRBV6-4A0A1B0GX49 114 aa7.3□□□□□ -1.24
CLSTN1-203ENST00000435891 Q5XG85 94 aa7.3□□□□□ -1.24
CLSTN1-203ENST00000435891 C5orf38Q86SI9 138 aa7.3□□□□□ -1.24
CLSTN1-203ENST00000435891 OVOL2Q9BRP0 275 aa7.3□□□□□ -1.24
CLSTN1-203ENST00000435891 SPATA3Q8NHX4 192 aa7.3□□□□□ -1.24
CLSTN1-203ENST00000435891 SEC61GP60059 68 aa7.29□□□□□ -1.24
CLSTN1-203ENST00000435891 LINC01600Q96MT4 127 aa7.29□□□□□ -1.24
CLSTN1-203ENST00000435891 V9GYY9 64 aa7.29□□□□□ -1.24
CLSTN1-203ENST00000435891 DEFB130BP0DP73 79 aa7.29□□□□□ -1.24
CLSTN1-203ENST00000435891 DEFB130AP0DP74 79 aa7.29□□□□□ -1.24
CLSTN1-203ENST00000435891 TOMM7Q9P0U1 55 aa7.29□□□□□ -1.24
CLSTN1-203ENST00000435891 TRRAPQ9Y4A5 3859 aa7.29□□□□□ -1.24
CLSTN1-203ENST00000435891 TRBV6-8A0A0A6YYG3 113 aa7.28□□□□□ -1.24
CLSTN1-203ENST00000435891 HILS1P60008 231 aa7.28□□□□□ -1.24
CLSTN1-203ENST00000435891 RBM3P98179 157 aaKnown RBP7.27□□□□□ -1.25
CLSTN1-203ENST00000435891 CMC4P56277 68 aaPredicted RBP7.27□□□□□ -1.25
CLSTN1-203ENST00000435891 IGHV3OR16-9A0A0B4J2B5 98 aa7.26□□□□□ -1.25
CLSTN1-203ENST00000435891 MIR7-3HGQ8N6C7 128 aa7.26□□□□□ -1.25
CLSTN1-203ENST00000435891 LINC00846Q9NV44 126 aa7.26□□□□□ -1.25
CLSTN1-203ENST00000435891 COX7B2Q8TF08 81 aa7.26□□□□□ -1.25
CLSTN1-203ENST00000435891 FAM218AQ96MZ4 157 aa7.26□□□□□ -1.25
CLSTN1-203ENST00000435891 C1orf195Q5TG92 126 aa7.25□□□□□ -1.25
CLSTN1-203ENST00000435891 A0A096LPF7 62 aa7.25□□□□□ -1.25
CLSTN1-203ENST00000435891 KMT2BQ9UMN6 2715 aaPredicted RBP7.25□□□□□ -1.25
CLSTN1-203ENST00000435891 LINC00337Q8N6G1 96 aa7.24□□□□□ -1.25
CLSTN1-203ENST00000435891 IGKV2-28A0A075B6P5 120 aa7.24□□□□□ -1.25
CLSTN1-203ENST00000435891 NCR3O14931 201 aa7.24□□□□□ -1.25
CLSTN1-203ENST00000435891 IGKV2D-28P01615 120 aa7.24□□□□□ -1.25
CLSTN1-203ENST00000435891 LINC00482Q8N8I6 264 aa7.24□□□□□ -1.25
CLSTN1-203ENST00000435891 F8WDY8 70 aa7.24□□□□□ -1.25
CLSTN1-203ENST00000435891 C11orf68Q9H3H3 251 aaKnown RBP7.24□□□□□ -1.25
CLSTN1-203ENST00000435891 ATRQ13535 2644 aa7.24□□□□□ -1.25
CLSTN1-203ENST00000435891 NSD1Q96L73 2696 aaPredicted RBP7.24□□□□□ -1.25
CLSTN1-203ENST00000435891 CRPP02741 224 aa7.23□□□□□ -1.25
CLSTN1-203ENST00000435891 CLPSL2Q6UWE3 100 aa7.23□□□□□ -1.25
CLSTN1-203ENST00000435891 SNURFQ9Y675 71 aa7.23□□□□□ -1.25
CLSTN1-203ENST00000435891 PF4P02776 101 aa7.23□□□□□ -1.25
CLSTN1-203ENST00000435891 SLPIP03973 132 aa7.23□□□□□ -1.25
CLSTN1-203ENST00000435891 GYPEP15421 78 aa7.23□□□□□ -1.25
CLSTN1-203ENST00000435891 X6R8D5 127 aa7.23□□□□□ -1.25
CLSTN1-203ENST00000435891 DEFB4AO15263 64 aa7.23□□□□□ -1.25
CLSTN1-203ENST00000435891 S100A7L2Q5SY68 101 aa7.23□□□□□ -1.25
CLSTN1-203ENST00000435891 LINC01561Q8N1V8 128 aa7.23□□□□□ -1.25
CLSTN1-203ENST00000435891 MPLKIPQ8TAP9 179 aa7.23□□□□□ -1.25
CLSTN1-203ENST00000435891 ENHOQ6UWT2 76 aa7.22□□□□□ -1.25
CLSTN1-203ENST00000435891 NDUFC2O95298 119 aa7.22□□□□□ -1.25
CLSTN1-203ENST00000435891 LINC00158P58513 81 aa7.22□□□□□ -1.25
CLSTN1-203ENST00000435891 C22orf24Q9Y442 160 aa7.22□□□□□ -1.25
CLSTN1-203ENST00000435891 LINC00959A0A1B0GUT2 108 aa7.22□□□□□ -1.25
CLSTN1-203ENST00000435891 SND1-IT1Q9HBX3 110 aa7.22□□□□□ -1.25
CLSTN1-203ENST00000435891 A0A087WZ39 114 aa7.21□□□□□ -1.25
CLSTN1-203ENST00000435891 XCL1P47992 114 aa7.21□□□□□ -1.25
CLSTN1-203ENST00000435891 Q8N3U1 123 aa7.21□□□□□ -1.25
CLSTN1-203ENST00000435891 LECT2O14960 151 aa7.21□□□□□ -1.26
CLSTN1-203ENST00000435891 CCL18P55774 89 aa7.21□□□□□ -1.26
CLSTN1-203ENST00000435891 FAM19A1Q7Z5A9 133 aa7.21□□□□□ -1.26
CLSTN1-203ENST00000435891 LINC00612Q8N6U2 182 aa7.21□□□□□ -1.26
CLSTN1-203ENST00000435891 Q6JHZ5 121 aa7.21□□□□□ -1.26
CLSTN1-203ENST00000435891 COPS9Q8WXC6 57 aa7.2□□□□□ -1.26
CLSTN1-203ENST00000435891 UPK3BQ9BT76 320 aa7.2□□□□□ -1.26
CLSTN1-203ENST00000435891 J3QKU1 62 aa7.2□□□□□ -1.26
CLSTN1-203ENST00000435891 C9orf129Q5T035 196 aaKnown RBP7.19□□□□□ -1.26
CLSTN1-203ENST00000435891 FAM222AQ5U5X8 452 aa7.19□□□□□ -1.26
CLSTN1-203ENST00000435891 HIVEP1P15822 2718 aa7.19□□□□□ -1.26
CLSTN1-203ENST00000435891 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms