RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 LINC00846Q9NV44 126 aa4.86□□□□□ -1.63
CPS1-203ENST00000430249 X6R8D5 127 aa4.86□□□□□ -1.63
CPS1-203ENST00000430249 DIDO1Q9BTC0 2240 aaKnown RBP4.86□□□□□ -1.63
CPS1-203ENST00000430249 PRR3P79522 188 aaKnown RBP4.86□□□□□ -1.63
CPS1-203ENST00000430249 SPATA3Q8NHX4 192 aa4.86□□□□□ -1.63
CPS1-203ENST00000430249 PKDREJQ9NTG1 2253 aa4.86□□□□□ -1.63
CPS1-203ENST00000430249 C16orf90A8MZG2 172 aa4.86□□□□□ -1.63
CPS1-203ENST00000430249 C8orf87E5RJ46 101 aa4.86□□□□□ -1.63
CPS1-203ENST00000430249 TANC2Q9HCD6 1990 aa4.85□□□□□ -1.63
CPS1-203ENST00000430249 RPS28P62857 69 aaKnown RBP4.85□□□□□ -1.63
CPS1-203ENST00000430249 C6orf48Q9UBA6 75 aa4.85□□□□□ -1.63
CPS1-203ENST00000430249 ZNF318Q5VUA4 2279 aa4.85□□□□□ -1.63
CPS1-203ENST00000430249 CACNA1BQ00975 2339 aa4.85□□□□□ -1.63
CPS1-203ENST00000430249 Q6ZRX8 168 aa4.85□□□□□ -1.63
CPS1-203ENST00000430249 ERC2-IT1O76042 136 aa4.85□□□□□ -1.63
CPS1-203ENST00000430249 ACYP2P14621 99 aa4.85□□□□□ -1.63
CPS1-203ENST00000430249 C1orf64Q8NEQ6 169 aa4.85□□□□□ -1.63
CPS1-203ENST00000430249 MDFIQ99750 246 aa4.85□□□□□ -1.63
CPS1-203ENST00000430249 KIAA0087Q14695 138 aa4.85□□□□□ -1.63
CPS1-203ENST00000430249 LINC00167Q96N53 147 aa4.84□□□□□ -1.63
CPS1-203ENST00000430249 A0A087WVE0 104 aa4.84□□□□□ -1.63
CPS1-203ENST00000430249 MOBPQ13875 183 aa4.84□□□□□ -1.64
CPS1-203ENST00000430249 Q6ZQT0 140 aa4.84□□□□□ -1.64
CPS1-203ENST00000430249 CDIP1Q9H305 208 aa4.84□□□□□ -1.64
CPS1-203ENST00000430249 EP300Q09472 2414 aaPredicted RBP4.83□□□□□ -1.64
CPS1-203ENST00000430249 Q6ZRP5 223 aa4.83□□□□□ -1.64
CPS1-203ENST00000430249 A0A0U1RQV1 116 aa4.83□□□□□ -1.64
CPS1-203ENST00000430249 DNAH10OSP0CZ25 163 aa4.83□□□□□ -1.64
CPS1-203ENST00000430249 TRBV7-4A0A0J9YYF1 115 aa4.83□□□□□ -1.64
CPS1-203ENST00000430249 GPR179Q6PRD1 2367 aa4.82□□□□□ -1.64
CPS1-203ENST00000430249 HCFC1P51610 2035 aa4.82□□□□□ -1.64
CPS1-203ENST00000430249 Q8NAQ8 132 aa4.82□□□□□ -1.64
CPS1-203ENST00000430249 NBDYA0A0U1RRE5 68 aa4.82□□□□□ -1.64
CPS1-203ENST00000430249 RPL37AP61513 92 aaKnown RBP4.82□□□□□ -1.64
CPS1-203ENST00000430249 COL6A6A6NMZ7 2263 aa4.82□□□□□ -1.64
CPS1-203ENST00000430249 EML5Q05BV3 1969 aa4.82□□□□□ -1.64
CPS1-203ENST00000430249 ABCA4P78363 2273 aa4.82□□□□□ -1.64
CPS1-203ENST00000430249 FREM1Q5H8C1 2179 aa4.82□□□□□ -1.64
CPS1-203ENST00000430249 PRR4Q16378 134 aa4.81□□□□□ -1.64
CPS1-203ENST00000430249 PRLHP81277 87 aa4.81□□□□□ -1.64
CPS1-203ENST00000430249 PRO0461Q9UI25 63 aa4.81□□□□□ -1.64
CPS1-203ENST00000430249 LOC101927531A0A1B0GV80 90 aa4.81□□□□□ -1.64
CPS1-203ENST00000430249 SMIM29Q86T20 159 aa4.81□□□□□ -1.64
CPS1-203ENST00000430249 CADP27708 2225 aa4.8□□□□□ -1.64
CPS1-203ENST00000430249 CEP250Q9BV73 2442 aa4.8□□□□□ -1.64
CPS1-203ENST00000430249 IGLV6-57P01721 117 aa4.8□□□□□ -1.64
CPS1-203ENST00000430249 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
CPS1-203ENST00000430249 NCOR1O75376 2440 aa4.8□□□□□ -1.64
CPS1-203ENST00000430249 PLA2G2DQ9UNK4 145 aa4.8□□□□□ -1.64
CPS1-203ENST00000430249 C7orf65Q6ZTY9 151 aa4.8□□□□□ -1.64
CPS1-203ENST00000430249 RTL8CO15255 209 aa4.79□□□□□ -1.64
CPS1-203ENST00000430249 PCOTHQ58A44 107 aa4.79□□□□□ -1.64
CPS1-203ENST00000430249 CNOT1A5YKK6 2376 aaKnown RBP4.79□□□□□ -1.64
CPS1-203ENST00000430249 FAM229AH3BQW9 127 aa4.79□□□□□ -1.64
CPS1-203ENST00000430249 TRAV22A0A0B4J277 110 aa4.79□□□□□ -1.64
CPS1-203ENST00000430249 LINC00476Q8WZB0 136 aa4.78□□□□□ -1.64
CPS1-203ENST00000430249 PLA2G1BP04054 148 aaKnown RBP4.78□□□□□ -1.64
CPS1-203ENST00000430249 A0A1B0GU69 56 aa4.78□□□□□ -1.64
CPS1-203ENST00000430249 PRO0628Q9UI54 55 aa4.78□□□□□ -1.64
CPS1-203ENST00000430249 LINC00313P59037 77 aa4.77□□□□□ -1.65
CPS1-203ENST00000430249 WNK2Q9Y3S1 2297 aa4.77□□□□□ -1.65
CPS1-203ENST00000430249 SOSTDC1Q6X4U4 206 aa4.77□□□□□ -1.65
CPS1-203ENST00000430249 LITAFQ99732 161 aa4.77□□□□□ -1.65
CPS1-203ENST00000430249 SMCPP49901 116 aaPredicted RBP4.77□□□□□ -1.65
CPS1-203ENST00000430249 KCNQ1DNQ9H478 68 aa4.77□□□□□ -1.65
CPS1-203ENST00000430249 A8MWP4 228 aa4.77□□□□□ -1.65
CPS1-203ENST00000430249 EPM2AB3EWF7 344 aa4.77□□□□□ -1.65
CPS1-203ENST00000430249 TLX1NBP0CAT3 122 aa4.77□□□□□ -1.65
CPS1-203ENST00000430249 LINC00612Q8N6U2 182 aa4.77□□□□□ -1.65
CPS1-203ENST00000430249 LINC00588Q9Y4M8 146 aa4.77□□□□□ -1.65
CPS1-203ENST00000430249 HIVEP2P31629 2446 aa4.76□□□□□ -1.65
CPS1-203ENST00000430249 VPREB1P12018 145 aa4.76□□□□□ -1.65
CPS1-203ENST00000430249 SPAG11AQ6PDA7 123 aa4.76□□□□□ -1.65
CPS1-203ENST00000430249 WWC2-AS2Q96NR7 200 aa4.76□□□□□ -1.65
CPS1-203ENST00000430249 KRTAP24-1Q3LI83 254 aa4.76□□□□□ -1.65
CPS1-203ENST00000430249 FAM218AQ96MZ4 157 aa4.76□□□□□ -1.65
CPS1-203ENST00000430249 COL27A1Q8IZC6 1860 aaPredicted RBP4.75□□□□□ -1.65
CPS1-203ENST00000430249 PTPRBP23467 1997 aa4.75□□□□□ -1.65
CPS1-203ENST00000430249 CSNK1G2-AS1Q8NCQ2 148 aa4.75□□□□□ -1.65
CPS1-203ENST00000430249 C19orf73Q9NVV2 129 aa4.75□□□□□ -1.65
CPS1-203ENST00000430249 IGLV1-50A0A075B6I6 118 aa4.75□□□□□ -1.65
CPS1-203ENST00000430249 POLEQ07864 2286 aa4.74□□□□□ -1.65
CPS1-203ENST00000430249 TYMSOSQ8TAI1 123 aa4.74□□□□□ -1.65
CPS1-203ENST00000430249 PRR34Q9NV39 138 aa4.74□□□□□ -1.65
CPS1-203ENST00000430249 AKAP6Q13023 2319 aa4.74□□□□□ -1.65
CPS1-203ENST00000430249 ROS1P08922 2347 aa4.73□□□□□ -1.65
CPS1-203ENST00000430249 ANKHD1Q8IWZ3 2542 aaKnown RBP4.73□□□□□ -1.65
CPS1-203ENST00000430249 CYP4F30PQ9H0H9 118 aa4.73□□□□□ -1.65
CPS1-203ENST00000430249 TET2Q6N021 2002 aaPredicted RBP4.73□□□□□ -1.65
CPS1-203ENST00000430249 IGKV2D-30A0A075B6S6 120 aa4.73□□□□□ -1.65
CPS1-203ENST00000430249 IGKV2-30P06310 120 aa4.73□□□□□ -1.65
CPS1-203ENST00000430249 PHF5AQ7RTV0 110 aaKnown RBP4.73□□□□□ -1.65
CPS1-203ENST00000430249 SSBP3-AS1Q7Z2R9 100 aa4.73□□□□□ -1.65
CPS1-203ENST00000430249 SPTBN1Q01082 2364 aaKnown RBP4.73□□□□□ -1.65
CPS1-203ENST00000430249 PSPHP1O15172 72 aa4.72□□□□□ -1.65
CPS1-203ENST00000430249 DEFB116Q30KQ4 102 aa4.72□□□□□ -1.65
CPS1-203ENST00000430249 RETNLBQ9BQ08 111 aa4.72□□□□□ -1.65
CPS1-203ENST00000430249 MRPL34Q9BQ48 92 aaKnown RBP4.72□□□□□ -1.65
CPS1-203ENST00000430249 SPACA4Q8TDM5 124 aa4.71□□□□□ -1.65
CPS1-203ENST00000430249 A0A096LNT2 108 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms