RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 CHCHD1Q96BP2 118 aaKnown RBP10.91□□□□□ -0.66
CTSD-203ENST00000429746 IGLC3P0DOY3 106 aa10.9□□□□□ -0.66
CTSD-203ENST00000429746 Q6ZRP5 223 aa10.9□□□□□ -0.66
CTSD-203ENST00000429746 Q8IZM0 81 aa10.9□□□□□ -0.66
CTSD-203ENST00000429746 KRTAP7-1Q8IUC3 87 aa10.89□□□□□ -0.67
CTSD-203ENST00000429746 GEMIN7Q9H840 131 aaKnown RBP10.89□□□□□ -0.67
CTSD-203ENST00000429746 LINC00474Q9P2X8 69 aa10.89□□□□□ -0.67
CTSD-203ENST00000429746 OXTP01178 125 aa10.88□□□□□ -0.67
CTSD-203ENST00000429746 RPL37AP61513 92 aaKnown RBP10.88□□□□□ -0.67
CTSD-203ENST00000429746 GAGE2BQ13066 116 aa10.88□□□□□ -0.67
CTSD-203ENST00000429746 C9orf116Q5BN46 136 aaPredicted RBP10.88□□□□□ -0.67
CTSD-203ENST00000429746 LINC00469Q8N7U9 141 aa10.88□□□□□ -0.67
CTSD-203ENST00000429746 PKIGQ9Y2B9 76 aa10.88□□□□□ -0.67
CTSD-203ENST00000429746 TRBV30A0A0K0K1B3 111 aa10.87□□□□□ -0.67
CTSD-203ENST00000429746 NUPR1O60356 82 aa10.87□□□□□ -0.67
CTSD-203ENST00000429746 ZNF22P17026 224 aaPredicted RBP10.86□□□□□ -0.67
CTSD-203ENST00000429746 RPL18AQ02543 176 aaKnown RBP10.86□□□□□ -0.67
CTSD-203ENST00000429746 DPH3Q96FX2 82 aa10.86□□□□□ -0.67
CTSD-203ENST00000429746 IGLV5-39A0A0G2JS06 123 aa10.85□□□□□ -0.67
CTSD-203ENST00000429746 SERF1AO75920 110 aa10.85□□□□□ -0.67
CTSD-203ENST00000429746 ATP5LO75964 103 aa10.85□□□□□ -0.67
CTSD-203ENST00000429746 SPINK8P0C7L1 97 aa10.85□□□□□ -0.67
CTSD-203ENST00000429746 FAM19A2Q8N3H0 131 aa10.85□□□□□ -0.67
CTSD-203ENST00000429746 TOMM7Q9P0U1 55 aa10.85□□□□□ -0.67
CTSD-203ENST00000429746 C11orf86A6NJI1 115 aa10.84□□□□□ -0.67
CTSD-203ENST00000429746 FAM168BA1KXE4 195 aa10.83□□□□□ -0.68
CTSD-203ENST00000429746 C9orf129Q5T035 196 aaKnown RBP10.83□□□□□ -0.68
CTSD-203ENST00000429746 NDUFC2-KCTD14E9PQ53 114 aa10.82□□□□□ -0.68
CTSD-203ENST00000429746 C6orf226Q5I0X4 101 aa10.82□□□□□ -0.68
CTSD-203ENST00000429746 BAGE3Q86Y29 109 aa10.82□□□□□ -0.68
CTSD-203ENST00000429746 COX7B2Q8TF08 81 aa10.82□□□□□ -0.68
CTSD-203ENST00000429746 PACRGQ96M98 296 aaPredicted RBP10.82□□□□□ -0.68
CTSD-203ENST00000429746 TRAV12-1A0A0B4J245 112 aa10.81□□□□□ -0.68
CTSD-203ENST00000429746 F8VRH5 84 aa10.81□□□□□ -0.68
CTSD-203ENST00000429746 NDUFA6P56556 154 aa10.81□□□□□ -0.68
CTSD-203ENST00000429746 KRTAP11-1Q8IUC1 163 aa10.81□□□□□ -0.68
CTSD-203ENST00000429746 IFI27L1Q96BM0 104 aa10.81□□□□□ -0.68
CTSD-203ENST00000429746 HSBP1O75506 76 aa10.8□□□□□ -0.68
CTSD-203ENST00000429746 PRSS2P07478 247 aa10.8□□□□□ -0.68
CTSD-203ENST00000429746 PRR3P79522 188 aaKnown RBP10.8□□□□□ -0.68
CTSD-203ENST00000429746 TNXBP22105 4242 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 HIST1H2BKO60814 126 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 HIST1H2BJP06899 126 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 HIST1H2BOP23527 126 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 HIST1H2BBP33778 126 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 HIST1H2BDP58876 126 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 CKS1BP61024 79 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 HIST1H2BCP62807 126 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 HIST2H2BEQ16778 126 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 GAGE2EQ4V326 116 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.79□□□□□ -0.68
CTSD-203ENST00000429746 SERTAD4-AS1Q5TG53 156 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 HIST1H2BHQ93079 126 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 HIST1H2BNQ99877 126 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 HIST1H2BMQ99879 126 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 GAGE2DQ9UEU5 116 aa10.79□□□□□ -0.68
CTSD-203ENST00000429746 CXCL5P42830 114 aa10.78□□□□□ -0.68
CTSD-203ENST00000429746 PHF5AQ7RTV0 110 aaKnown RBP10.78□□□□□ -0.68
CTSD-203ENST00000429746 C7orf33Q8WU49 177 aa10.78□□□□□ -0.68
CTSD-203ENST00000429746 CHTOPQ9Y3Y2 248 aaKnown RBP10.78□□□□□ -0.68
CTSD-203ENST00000429746 H3BRM9 83 aa10.76□□□□□ -0.69
CTSD-203ENST00000429746 ODF1Q14990 250 aa10.76□□□□□ -0.69
CTSD-203ENST00000429746 TMEM223A0PJW6 202 aa10.74□□□□□ -0.69
CTSD-203ENST00000429746 LEPROTL1O95214 131 aa10.73□□□□□ -0.69
CTSD-203ENST00000429746 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.69
CTSD-203ENST00000429746 FAM19A5Q7Z5A7 132 aaPredicted RBP10.73□□□□□ -0.69
CTSD-203ENST00000429746 ZNF625Q96I27 306 aaPredicted RBP10.73□□□□□ -0.69
CTSD-203ENST00000429746 XAGE1AQ9HD64 81 aa10.73□□□□□ -0.69
CTSD-203ENST00000429746 TMEM170BQ5T4T1 132 aa10.72□□□□□ -0.69
CTSD-203ENST00000429746 PSORS1C2Q9UIG4 136 aa10.72□□□□□ -0.69
CTSD-203ENST00000429746 MT1HL1P0DM35 61 aa10.69□□□□□ -0.7
CTSD-203ENST00000429746 FABP4P15090 132 aa10.69□□□□□ -0.7
CTSD-203ENST00000429746 M0QXV9 152 aa10.68□□□□□ -0.7
CTSD-203ENST00000429746 COA6Q5JTJ3 125 aaKnown RBP10.68□□□□□ -0.7
CTSD-203ENST00000429746 H0Y8G0 127 aa10.66□□□□□ -0.7
CTSD-203ENST00000429746 ATP6V1G1O75348 118 aa10.66□□□□□ -0.7
CTSD-203ENST00000429746 TSPEAR-AS2P59090 65 aa10.66□□□□□ -0.7
CTSD-203ENST00000429746 Q8NDZ9 215 aa10.66□□□□□ -0.7
CTSD-203ENST00000429746 HSPB8Q9UJY1 196 aa10.66□□□□□ -0.7
CTSD-203ENST00000429746 PLA2G2DQ9UNK4 145 aa10.66□□□□□ -0.7
CTSD-203ENST00000429746 C22orf24Q9Y442 160 aa10.66□□□□□ -0.7
CTSD-203ENST00000429746 PMCHL2Q9BQD1 86 aa10.65□□□□□ -0.7
CTSD-203ENST00000429746 ERG28Q9UKR5 140 aa10.65□□□□□ -0.7
CTSD-203ENST00000429746 HMCN2Q8NDA2 5059 aa10.64□□□□□ -0.71
CTSD-203ENST00000429746 IGLV5-37A0A075B6J1 123 aa10.64□□□□□ -0.71
CTSD-203ENST00000429746 TP73-AS1Q9UF72 201 aa10.63□□□□□ -0.71
CTSD-203ENST00000429746 PFN2P35080 140 aa10.62□□□□□ -0.71
CTSD-203ENST00000429746 SPINK6Q6UWN8 80 aa10.62□□□□□ -0.71
CTSD-203ENST00000429746 SND1-IT1Q9HBX3 110 aa10.62□□□□□ -0.71
CTSD-203ENST00000429746 S100A1P23297 94 aa10.61□□□□□ -0.71
CTSD-203ENST00000429746 PLNP26678 52 aa10.61□□□□□ -0.71
CTSD-203ENST00000429746 COX17Q14061 63 aa10.61□□□□□ -0.71
CTSD-203ENST00000429746 C1orf137Q5JT78 98 aa10.61□□□□□ -0.71
CTSD-203ENST00000429746 SYS1-DBNDD2H3BUS1 97 aa10.6□□□□□ -0.71
CTSD-203ENST00000429746 DPM2O94777 84 aa10.6□□□□□ -0.71
CTSD-203ENST00000429746 IGLV7-43P04211 117 aa10.6□□□□□ -0.71
CTSD-203ENST00000429746 SFTA2Q6UW10 78 aa10.6□□□□□ -0.71
CTSD-203ENST00000429746 VPREB1P12018 145 aa10.59□□□□□ -0.71
CTSD-203ENST00000429746 MRPL55Q7Z7F7 128 aaKnown RBP10.59□□□□□ -0.71
CTSD-203ENST00000429746 IGKCP01834 107 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms