RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 TRBV10-3A0A0K0K1G6 114 aa6.45□□□□□ -1.38
CTNND1-208ENST00000428599 CEP295Q9C0D2 2601 aa6.45□□□□□ -1.38
CTNND1-208ENST00000428599 PRM2P04554 102 aa6.45□□□□□ -1.38
CTNND1-208ENST00000428599 ADAMTS20P59510 1910 aa6.45□□□□□ -1.38
CTNND1-208ENST00000428599 IGLV1-51P01701 117 aa6.45□□□□□ -1.38
CTNND1-208ENST00000428599 POLR2KP53803 58 aaKnown RBP6.45□□□□□ -1.38
CTNND1-208ENST00000428599 C16orf95Q9H693 158 aa6.44□□□□□ -1.38
CTNND1-208ENST00000428599 ODF3L2Q3SX64 289 aa6.43□□□□□ -1.38
CTNND1-208ENST00000428599 LINC01547P58512 204 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-208ENST00000428599 POM121L12Q8N7R1 296 aa6.43□□□□□ -1.38
CTNND1-208ENST00000428599 Q8N814 137 aa6.43□□□□□ -1.38
CTNND1-208ENST00000428599 COX7CP15954 63 aa6.42□□□□□ -1.38
CTNND1-208ENST00000428599 PMAIP1Q13794 54 aa6.42□□□□□ -1.38
CTNND1-208ENST00000428599 SPTBN4Q9H254 2564 aa6.42□□□□□ -1.38
CTNND1-208ENST00000428599 COX6A2Q02221 97 aa6.42□□□□□ -1.38
CTNND1-208ENST00000428599 C9orf116Q5BN46 136 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-208ENST00000428599 C11orf21Q9P2W6 132 aa6.42□□□□□ -1.38
CTNND1-208ENST00000428599 PCOTHQ58A44 107 aa6.41□□□□□ -1.38
CTNND1-208ENST00000428599 LINC00242Q5T6M2 205 aa6.41□□□□□ -1.38
CTNND1-208ENST00000428599 EXPH5Q8NEV8 1989 aa6.41□□□□□ -1.38
CTNND1-208ENST00000428599 COL4A2P08572 1712 aa6.41□□□□□ -1.38
CTNND1-208ENST00000428599 TRAV7A0A075B6U4 112 aa6.41□□□□□ -1.38
CTNND1-208ENST00000428599 Q6Q795 121 aa6.41□□□□□ -1.38
CTNND1-208ENST00000428599 FHL2Q14192 279 aa6.4□□□□□ -1.38
CTNND1-208ENST00000428599 EDN2P20800 178 aa6.4□□□□□ -1.39
CTNND1-208ENST00000428599 Q8N2B8 174 aa6.4□□□□□ -1.39
CTNND1-208ENST00000428599 A0A087WSZ3 146 aa6.4□□□□□ -1.39
CTNND1-208ENST00000428599 MYO9AB2RTY4 2548 aa6.4□□□□□ -1.39
CTNND1-208ENST00000428599 SMIM26A0A096LP01 95 aa6.39□□□□□ -1.39
CTNND1-208ENST00000428599 DSCAML1Q8TD84 2053 aa6.39□□□□□ -1.39
CTNND1-208ENST00000428599 H0Y9P7 68 aa6.39□□□□□ -1.39
CTNND1-208ENST00000428599 SMIM1B2RUZ4 78 aa6.39□□□□□ -1.39
CTNND1-208ENST00000428599 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
CTNND1-208ENST00000428599 VPREB1P12018 145 aa6.39□□□□□ -1.39
CTNND1-208ENST00000428599 LYPD5Q6UWN5 251 aa6.38□□□□□ -1.39
CTNND1-208ENST00000428599 SBSPONQ8IVN8 264 aa6.38□□□□□ -1.39
CTNND1-208ENST00000428599 CHD8Q9HCK8 2581 aa6.38□□□□□ -1.39
CTNND1-208ENST00000428599 UTRNP46939 3433 aa6.38□□□□□ -1.39
CTNND1-208ENST00000428599 IGLV4-60A0A075B6I1 120 aa6.38□□□□□ -1.39
CTNND1-208ENST00000428599 HCG22E2RYF7 251 aa6.37□□□□□ -1.39
CTNND1-208ENST00000428599 JMJD1CQ15652 2540 aa6.37□□□□□ -1.39
CTNND1-208ENST00000428599 TRBV7-7A0A0K0K1E9 115 aa6.37□□□□□ -1.39
CTNND1-208ENST00000428599 PLA2G1BP04054 148 aaKnown RBP6.37□□□□□ -1.39
CTNND1-208ENST00000428599 LINC00575Q6W349 94 aa6.37□□□□□ -1.39
CTNND1-208ENST00000428599 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
CTNND1-208ENST00000428599 IGIPA6NJ69 53 aa6.37□□□□□ -1.39
CTNND1-208ENST00000428599 CRIP2P52943 208 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-208ENST00000428599 C7orf65Q6ZTY9 151 aa6.36□□□□□ -1.39
CTNND1-208ENST00000428599 ZFYVE26Q68DK2 2539 aa6.36□□□□□ -1.39
CTNND1-208ENST00000428599 IGKV2D-30A0A075B6S6 120 aa6.36□□□□□ -1.39
CTNND1-208ENST00000428599 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
CTNND1-208ENST00000428599 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
CTNND1-208ENST00000428599 MDFIQ99750 246 aa6.35□□□□□ -1.39
CTNND1-208ENST00000428599 PRR3P79522 188 aaKnown RBP6.35□□□□□ -1.39
CTNND1-208ENST00000428599 FHL3Q13643 280 aa6.35□□□□□ -1.39
CTNND1-208ENST00000428599 CSDC2Q9Y534 153 aaKnown RBP6.35□□□□□ -1.39
CTNND1-208ENST00000428599 A0A087WYN8 130 aa6.35□□□□□ -1.39
CTNND1-208ENST00000428599 A0A1B0GUV1 79 aa6.35□□□□□ -1.39
CTNND1-208ENST00000428599 LINC01561Q8N1V8 128 aa6.35□□□□□ -1.39
CTNND1-208ENST00000428599 TLN2Q9Y4G6 2542 aa6.35□□□□□ -1.39
CTNND1-208ENST00000428599 LINC00694P0DN24 101 aa6.35□□□□□ -1.39
CTNND1-208ENST00000428599 XGP55808 180 aa6.35□□□□□ -1.39
CTNND1-208ENST00000428599 BEAN1Q3B7T3 259 aa6.35□□□□□ -1.39
CTNND1-208ENST00000428599 CNFNQ9BYD5 112 aa6.35□□□□□ -1.39
CTNND1-208ENST00000428599 ABCA12Q86UK0 2595 aa6.35□□□□□ -1.39
CTNND1-208ENST00000428599 PRLHP81277 87 aa6.34□□□□□ -1.39
CTNND1-208ENST00000428599 DEFB116Q30KQ4 102 aa6.34□□□□□ -1.39
CTNND1-208ENST00000428599 CCDC179H3BU77 68 aa6.34□□□□□ -1.39
CTNND1-208ENST00000428599 SPACA4Q8TDM5 124 aa6.34□□□□□ -1.39
CTNND1-208ENST00000428599 SMCR5Q8TEV8 140 aa6.34□□□□□ -1.39
CTNND1-208ENST00000428599 SOSTDC1Q6X4U4 206 aa6.33□□□□□ -1.4
CTNND1-208ENST00000428599 ZNF580Q9UK33 172 aa6.33□□□□□ -1.4
CTNND1-208ENST00000428599 Q8N3U1 123 aa6.33□□□□□ -1.4
CTNND1-208ENST00000428599 C22orf24Q9Y442 160 aa6.33□□□□□ -1.4
CTNND1-208ENST00000428599 ZNF462Q96JM2 2506 aa6.32□□□□□ -1.4
CTNND1-208ENST00000428599 GAS8-AS1O95177 125 aa6.32□□□□□ -1.4
CTNND1-208ENST00000428599 Q6ZRU5 148 aa6.32□□□□□ -1.4
CTNND1-208ENST00000428599 C2orf91Q6ZV80 131 aa6.32□□□□□ -1.4
CTNND1-208ENST00000428599 USP9XQ93008 2570 aaPredicted RBP6.32□□□□□ -1.4
CTNND1-208ENST00000428599 CRYGAP11844 174 aa6.32□□□□□ -1.4
CTNND1-208ENST00000428599 C2CD3Q4AC94 2353 aa6.31□□□□□ -1.4
CTNND1-208ENST00000428599 LRRK2Q5S007 2527 aa6.31□□□□□ -1.4
CTNND1-208ENST00000428599 J3QL48 77 aa6.31□□□□□ -1.4
CTNND1-208ENST00000428599 C1orf64Q8NEQ6 169 aa6.3□□□□□ -1.4
CTNND1-208ENST00000428599 PTPRBP23467 1997 aa6.3□□□□□ -1.4
CTNND1-208ENST00000428599 AMELXQ99217 191 aa6.3□□□□□ -1.4
CTNND1-208ENST00000428599 DNAH12Q6ZR08 3092 aa6.29□□□□□ -1.4
CTNND1-208ENST00000428599 A0A087WVE0 104 aa6.29□□□□□ -1.4
CTNND1-208ENST00000428599 PSPHP1O15172 72 aa6.29□□□□□ -1.4
CTNND1-208ENST00000428599 MOBPQ13875 183 aa6.28□□□□□ -1.4
CTNND1-208ENST00000428599 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
CTNND1-208ENST00000428599 A0A1B0GU69 56 aa6.28□□□□□ -1.4
CTNND1-208ENST00000428599 FN1P02751 2386 aaKnown RBP6.28□□□□□ -1.4
CTNND1-208ENST00000428599 C16orf90A8MZG2 172 aa6.27□□□□□ -1.4
CTNND1-208ENST00000428599 USP9YO00507 2555 aaPredicted RBP6.27□□□□□ -1.41
CTNND1-208ENST00000428599 ACYP2P14621 99 aa6.27□□□□□ -1.41
CTNND1-208ENST00000428599 ADAMTSL4-AS1Q5T5F5 129 aa6.26□□□□□ -1.41
CTNND1-208ENST00000428599 TYMSOSQ8TAI1 123 aa6.26□□□□□ -1.41
CTNND1-208ENST00000428599 TMEM254Q8TBM7 123 aa6.26□□□□□ -1.41
CTNND1-208ENST00000428599 FASNP49327 2511 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms