RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 C14orf132Q9NPU4 83 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 XCL2Q9UBD3 114 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 ATP5EP56381 51 aaPredicted RBP3.61□□□□□ -1.83
RIF1-203ENST00000428287 C20orf197Q8N268 126 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 IGKV3D-7A0A0C4DH55 119 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 C10orf105Q8TEF2 133 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 J3QLI3 93 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 GHRHP01286 108 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 CRPP02741 224 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 IGHV4-31P0DP07 118 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 BLCAPP62952 87 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 DEFB104AQ8WTQ1 72 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 AVPP01185 164 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 PROK1P58294 105 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 FAM19A1Q7Z5A9 133 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 IGHV4-28A0A0C4DH34 117 aa3.6□□□□□ -1.83
RIF1-203ENST00000428287 CXCL6P80162 114 aa3.6□□□□□ -1.83
RIF1-203ENST00000428287 Q9HAA7 133 aa3.6□□□□□ -1.83
RIF1-203ENST00000428287 PDE6GP18545 87 aa3.6□□□□□ -1.83
RIF1-203ENST00000428287 LOC100131303A0A0U1RQF7 123 aa3.6□□□□□ -1.83
RIF1-203ENST00000428287 RNASE13Q5GAN3 156 aaKnown RBP3.6□□□□□ -1.83
RIF1-203ENST00000428287 IGKV3-7A0A075B6H7 116 aa3.6□□□□□ -1.83
RIF1-203ENST00000428287 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.6□□□□□ -1.83
RIF1-203ENST00000428287 LOC110117498A0A087WWA1 95 aa3.6□□□□□ -1.83
RIF1-203ENST00000428287 A0A087WYN8 130 aa3.59□□□□□ -1.83
RIF1-203ENST00000428287 FAM236DA0A1B0GTK5 79 aa3.59□□□□□ -1.83
RIF1-203ENST00000428287 FAM236CP0DP71 79 aa3.59□□□□□ -1.83
RIF1-203ENST00000428287 LECT2O14960 151 aa3.59□□□□□ -1.83
RIF1-203ENST00000428287 HOXD3P31249 432 aaPredicted RBP3.59□□□□□ -1.83
RIF1-203ENST00000428287 KLRB1Q12918 225 aa3.59□□□□□ -1.83
RIF1-203ENST00000428287 IL17DQ8TAD2 202 aa3.59□□□□□ -1.83
RIF1-203ENST00000428287 MUC7Q8TAX7 377 aa3.59□□□□□ -1.83
RIF1-203ENST00000428287 UBL5Q9BZL1 73 aa3.59□□□□□ -1.83
RIF1-203ENST00000428287 A6NDX4 124 aa3.59□□□□□ -1.84
RIF1-203ENST00000428287 GRNP28799 593 aaKnown RBP3.59□□□□□ -1.84
RIF1-203ENST00000428287 CCL21O00585 134 aa3.58□□□□□ -1.84
RIF1-203ENST00000428287 CDSNQ15517 529 aa3.58□□□□□ -1.84
RIF1-203ENST00000428287 TRAV23DV6A0A075B6W5 121 aa3.58□□□□□ -1.84
RIF1-203ENST00000428287 C11orf44Q8N8P7 122 aa3.58□□□□□ -1.84
RIF1-203ENST00000428287 Q6ZRU5 148 aa3.58□□□□□ -1.84
RIF1-203ENST00000428287 Q8N814 137 aa3.58□□□□□ -1.84
RIF1-203ENST00000428287 Q6ZTI0 123 aa3.58□□□□□ -1.84
RIF1-203ENST00000428287 ORMDL1Q9P0S3 153 aa3.58□□□□□ -1.84
RIF1-203ENST00000428287 C6orf223Q8N319 242 aa3.58□□□□□ -1.84
RIF1-203ENST00000428287 HILS1P60008 231 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 LINC00482Q8N8I6 264 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 BPESC1Q9GZL8 116 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 IGHV4-30-2A0A087WSY4 118 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 RS1O15537 224 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 UBE2E2Q96LR5 201 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 Q6ZQT0 140 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 A0A0U1RRA0 63 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 NCR3O14931 201 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 C1orf158Q8N1D5 194 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 A0A1B0GUV1 79 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 RBMY1BA6NDE4 496 aaKnown RBP3.57□□□□□ -1.84
RIF1-203ENST00000428287 RBMY1EA6NEQ0 496 aaKnown RBP3.57□□□□□ -1.84
RIF1-203ENST00000428287 H3BQ85 93 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 RBMY1DP0C7P1 496 aaKnown RBP3.57□□□□□ -1.84
RIF1-203ENST00000428287 RPL36AP83881 106 aaKnown RBP3.57□□□□□ -1.84
RIF1-203ENST00000428287 RPL36ALQ969Q0 106 aaKnown RBP3.57□□□□□ -1.84
RIF1-203ENST00000428287 IGHV3-38A0A0C4DH36 116 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 IGHV3-11P01762 117 aa3.57□□□□□ -1.84
RIF1-203ENST00000428287 H3BUX3 64 aa3.56□□□□□ -1.84
RIF1-203ENST00000428287 COX17Q14061 63 aa3.56□□□□□ -1.84
RIF1-203ENST00000428287 EDN2P20800 178 aa3.56□□□□□ -1.84
RIF1-203ENST00000428287 OCR1Q9BZK8 76 aa3.56□□□□□ -1.84
RIF1-203ENST00000428287 LCE6AA0A183 80 aa3.56□□□□□ -1.84
RIF1-203ENST00000428287 PLA2G2AP14555 144 aa3.56□□□□□ -1.84
RIF1-203ENST00000428287 CELA1Q9UNI1 258 aa3.56□□□□□ -1.84
RIF1-203ENST00000428287 DEFB114Q30KQ6 69 aa3.56□□□□□ -1.84
RIF1-203ENST00000428287 TMEM243Q9BU79 118 aa3.56□□□□□ -1.84
RIF1-203ENST00000428287 LINC01547P58512 204 aaPredicted RBP3.56□□□□□ -1.84
RIF1-203ENST00000428287 COX7B2Q8TF08 81 aa3.55□□□□□ -1.84
RIF1-203ENST00000428287 RPL35AP18077 110 aaKnown RBP3.55□□□□□ -1.84
RIF1-203ENST00000428287 Q8N3U1 123 aa3.55□□□□□ -1.84
RIF1-203ENST00000428287 C1orf43Q9BWL3 253 aa3.55□□□□□ -1.84
RIF1-203ENST00000428287 MIFP14174 115 aa3.55□□□□□ -1.84
RIF1-203ENST00000428287 Q8IZM0 81 aa3.55□□□□□ -1.84
RIF1-203ENST00000428287 IGKV3-20P01619 116 aa3.55□□□□□ -1.84
RIF1-203ENST00000428287 RBM3P98179 157 aaKnown RBP3.55□□□□□ -1.84
RIF1-203ENST00000428287 TRBV7-6A0A0J9YX20 115 aa3.55□□□□□ -1.84
RIF1-203ENST00000428287 DEFB124Q8NES8 71 aa3.55□□□□□ -1.84
RIF1-203ENST00000428287 KNCNA6PVL3 124 aa3.54□□□□□ -1.84
RIF1-203ENST00000428287 Q6ZVQ6 151 aa3.54□□□□□ -1.84
RIF1-203ENST00000428287 ADORA2A-AS1P86434 159 aa3.54□□□□□ -1.84
RIF1-203ENST00000428287 PRM2P04554 102 aa3.54□□□□□ -1.84
RIF1-203ENST00000428287 LYSTQ99698 3801 aa3.54□□□□□ -1.84
RIF1-203ENST00000428287 KIAA0087Q14695 138 aa3.54□□□□□ -1.84
RIF1-203ENST00000428287 ENHOQ6UWT2 76 aa3.54□□□□□ -1.84
RIF1-203ENST00000428287 LINC00575Q6W349 94 aa3.53□□□□□ -1.84
RIF1-203ENST00000428287 IGHV4-61A0A0C4DH41 118 aa3.53□□□□□ -1.84
RIF1-203ENST00000428287 PAX4O43316 350 aa3.53□□□□□ -1.84
RIF1-203ENST00000428287 IGLV6-57P01721 117 aa3.53□□□□□ -1.84
RIF1-203ENST00000428287 IGHV4-59P01825 116 aa3.53□□□□□ -1.84
RIF1-203ENST00000428287 ZNF561-AS1K7EIQ3 104 aa3.53□□□□□ -1.84
RIF1-203ENST00000428287 A0A0J9YWU9 116 aa3.52□□□□□ -1.85
RIF1-203ENST00000428287 IGHV4-30-4P0DP06 118 aa3.52□□□□□ -1.85
RIF1-203ENST00000428287 DEFB131AP59861 70 aa3.52□□□□□ -1.85
RIF1-203ENST00000428287 TRBV6-8A0A0A6YYG3 113 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms