RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 ZC2HC1BQ5TFG8 222 aa12.97□□□□□ -0.33
HSPG2-205ENST00000427897 ATP5LO75964 103 aa12.96□□□□□ -0.33
HSPG2-205ENST00000427897 PRSS2P07478 247 aa12.96□□□□□ -0.33
HSPG2-205ENST00000427897 PDZD11Q5EBL8 140 aa12.96□□□□□ -0.33
HSPG2-205ENST00000427897 SEC11AP67812 179 aa12.95□□□□□ -0.34
HSPG2-205ENST00000427897 UNQ6190/PRO20217Q6UXQ8 127 aa12.95□□□□□ -0.34
HSPG2-205ENST00000427897 LINC00173Q6ZV60 143 aa12.95□□□□□ -0.34
HSPG2-205ENST00000427897 PACRGQ96M98 296 aaPredicted RBP12.94□□□□□ -0.34
HSPG2-205ENST00000427897 GEMIN7Q9H840 131 aaKnown RBP12.94□□□□□ -0.34
HSPG2-205ENST00000427897 PRR3P79522 188 aaKnown RBP12.93□□□□□ -0.34
HSPG2-205ENST00000427897 C9orf116Q5BN46 136 aaPredicted RBP12.93□□□□□ -0.34
HSPG2-205ENST00000427897 LINC01561Q8N1V8 128 aa12.93□□□□□ -0.34
HSPG2-205ENST00000427897 TOMM7Q9P0U1 55 aa12.93□□□□□ -0.34
HSPG2-205ENST00000427897 LINC00310P59036 64 aa12.92□□□□□ -0.34
HSPG2-205ENST00000427897 PMVKQ15126 192 aa12.92□□□□□ -0.34
HSPG2-205ENST00000427897 C10orf25Q5T742 122 aa12.92□□□□□ -0.34
HSPG2-205ENST00000427897 Q6ZRP5 223 aa12.92□□□□□ -0.34
HSPG2-205ENST00000427897 A0A1W2PNN7 141 aa12.91□□□□□ -0.34
HSPG2-205ENST00000427897 CKS1BP61024 79 aa12.91□□□□□ -0.34
HSPG2-205ENST00000427897 HERVK_113P63121 156 aa12.91□□□□□ -0.34
HSPG2-205ENST00000427897 C6orf226Q5I0X4 101 aa12.91□□□□□ -0.34
HSPG2-205ENST00000427897 FAM19A2Q8N3H0 131 aa12.91□□□□□ -0.34
HSPG2-205ENST00000427897 CST9LQ9H4G1 147 aa12.91□□□□□ -0.34
HSPG2-205ENST00000427897 GAGE2EQ4V326 116 aa12.9□□□□□ -0.34
HSPG2-205ENST00000427897 FAM19A3Q7Z5A8 133 aa12.9□□□□□ -0.34
HSPG2-205ENST00000427897 C6orf48Q9UBA6 75 aa12.9□□□□□ -0.34
HSPG2-205ENST00000427897 GAGE2DQ9UEU5 116 aa12.9□□□□□ -0.34
HSPG2-205ENST00000427897 SERTAD4-AS1Q5TG53 156 aa12.89□□□□□ -0.35
HSPG2-205ENST00000427897 TRBV30A0A0K0K1B3 111 aa12.88□□□□□ -0.35
HSPG2-205ENST00000427897 LEPROTL1O95214 131 aa12.88□□□□□ -0.35
HSPG2-205ENST00000427897 NDUFA6P56556 154 aa12.88□□□□□ -0.35
HSPG2-205ENST00000427897 KIAA0087Q14695 138 aa12.88□□□□□ -0.35
HSPG2-205ENST00000427897 C2orf82Q6UX34 121 aa12.88□□□□□ -0.35
HSPG2-205ENST00000427897 IFI27L1Q96BM0 104 aa12.88□□□□□ -0.35
HSPG2-205ENST00000427897 HSPB8Q9UJY1 196 aa12.88□□□□□ -0.35
HSPG2-205ENST00000427897 HERC1Q15751 4861 aa12.87□□□□□ -0.35
HSPG2-205ENST00000427897 NUPR1O60356 82 aa12.87□□□□□ -0.35
HSPG2-205ENST00000427897 TLX1NBP0CAT3 122 aa12.87□□□□□ -0.35
HSPG2-205ENST00000427897 COA6Q5JTJ3 125 aaKnown RBP12.87□□□□□ -0.35
HSPG2-205ENST00000427897 TINCRA0A1B0GVN0 87 aa12.85□□□□□ -0.35
HSPG2-205ENST00000427897 PHF5AQ7RTV0 110 aaKnown RBP12.85□□□□□ -0.35
HSPG2-205ENST00000427897 LINC00469Q8N7U9 141 aa12.85□□□□□ -0.35
HSPG2-205ENST00000427897 CDKN2A-AS1Q9UH64 79 aa12.85□□□□□ -0.35
HSPG2-205ENST00000427897 SPINK6Q6UWN8 80 aa12.84□□□□□ -0.35
HSPG2-205ENST00000427897 Q8IZM0 81 aa12.84□□□□□ -0.35
HSPG2-205ENST00000427897 TRAV12-1A0A0B4J245 112 aa12.83□□□□□ -0.36
HSPG2-205ENST00000427897 NDUFC2-KCTD14E9PQ53 114 aa12.83□□□□□ -0.36
HSPG2-205ENST00000427897 REG3GQ6UW15 175 aa12.83□□□□□ -0.36
HSPG2-205ENST00000427897 FAM19A5Q7Z5A7 132 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-205ENST00000427897 FABP4P15090 132 aa12.82□□□□□ -0.36
HSPG2-205ENST00000427897 IGLC3P0DOY3 106 aa12.81□□□□□ -0.36
HSPG2-205ENST00000427897 FAM168BA1KXE4 195 aa12.8□□□□□ -0.36
HSPG2-205ENST00000427897 C1orf137Q5JT78 98 aa12.8□□□□□ -0.36
HSPG2-205ENST00000427897 PSORS1C2Q9UIG4 136 aa12.8□□□□□ -0.36
HSPG2-205ENST00000427897 CHTOPQ9Y3Y2 248 aaKnown RBP12.8□□□□□ -0.36
HSPG2-205ENST00000427897 IGLV5-45A0A087WSX0 123 aa12.79□□□□□ -0.36
HSPG2-205ENST00000427897 H3BRM9 83 aa12.79□□□□□ -0.36
HSPG2-205ENST00000427897 PKHD1L1Q86WI1 4243 aa12.78□□□□□ -0.36
HSPG2-205ENST00000427897 F8VRH5 84 aa12.78□□□□□ -0.36
HSPG2-205ENST00000427897 CXCL5P42830 114 aa12.78□□□□□ -0.36
HSPG2-205ENST00000427897 UBE2BP63146 152 aa12.78□□□□□ -0.36
HSPG2-205ENST00000427897 MAP1LC3CQ9BXW4 147 aa12.78□□□□□ -0.36
HSPG2-205ENST00000427897 S100A6P06703 90 aa12.77□□□□□ -0.37
HSPG2-205ENST00000427897 H0Y8G0 127 aa12.76□□□□□ -0.37
HSPG2-205ENST00000427897 M0QXV9 152 aa12.76□□□□□ -0.37
HSPG2-205ENST00000427897 COX7B2Q8TF08 81 aa12.76□□□□□ -0.37
HSPG2-205ENST00000427897 LRP1Q07954 4544 aaKnown RBP12.76□□□□□ -0.37
HSPG2-205ENST00000427897 SRSF9Q13242 221 aaKnown RBP eCLIP12.75□□□□□ -0.37
HSPG2-205ENST00000427897 SMIM1B2RUZ4 78 aa12.74□□□□□ -0.37
HSPG2-205ENST00000427897 ODF1Q14990 250 aa12.74□□□□□ -0.37
HSPG2-205ENST00000427897 LINC01600Q96MT4 127 aa12.74□□□□□ -0.37
HSPG2-205ENST00000427897 PLA2G2DQ9UNK4 145 aa12.74□□□□□ -0.37
HSPG2-205ENST00000427897 C11orf86A6NJI1 115 aa12.73□□□□□ -0.37
HSPG2-205ENST00000427897 SPINK8P0C7L1 97 aa12.73□□□□□ -0.37
HSPG2-205ENST00000427897 MT1HL1P0DM35 61 aa12.73□□□□□ -0.37
HSPG2-205ENST00000427897 ZNF22P17026 224 aaPredicted RBP12.73□□□□□ -0.37
HSPG2-205ENST00000427897 PLNP26678 52 aa12.72□□□□□ -0.37
HSPG2-205ENST00000427897 C9orf129Q5T035 196 aaKnown RBP12.72□□□□□ -0.37
HSPG2-205ENST00000427897 FAT3Q8TDW7 4589 aa12.71□□□□□ -0.37
HSPG2-205ENST00000427897 TMEM170BQ5T4T1 132 aa12.71□□□□□ -0.37
HSPG2-205ENST00000427897 XAGE1AQ9HD64 81 aa12.71□□□□□ -0.37
HSPG2-205ENST00000427897 SYS1-DBNDD2H3BUS1 97 aa12.7□□□□□ -0.38
HSPG2-205ENST00000427897 S100A2P29034 98 aa12.7□□□□□ -0.38
HSPG2-205ENST00000427897 DPM2O94777 84 aa12.69□□□□□ -0.38
HSPG2-205ENST00000427897 IGLV7-43P04211 117 aa12.69□□□□□ -0.38
HSPG2-205ENST00000427897 PET117Q6UWS5 81 aa12.69□□□□□ -0.38
HSPG2-205ENST00000427897 LBHQ53QV2 105 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-205ENST00000427897 HIST3H2BBQ8N257 126 aa12.68□□□□□ -0.38
HSPG2-205ENST00000427897 DIRC1Q969H9 104 aa12.68□□□□□ -0.38
HSPG2-205ENST00000427897 IGLV5-39A0A0G2JS06 123 aa12.66□□□□□ -0.38
HSPG2-205ENST00000427897 IGKCP01834 107 aa12.65□□□□□ -0.38
HSPG2-205ENST00000427897 C3orf79P0CE67 100 aa12.65□□□□□ -0.38
HSPG2-205ENST00000427897 KRTDAPP60985 99 aa12.65□□□□□ -0.38
HSPG2-205ENST00000427897 KRTAP7-1Q8IUC3 87 aa12.65□□□□□ -0.38
HSPG2-205ENST00000427897 C22orf24Q9Y442 160 aa12.65□□□□□ -0.38
HSPG2-205ENST00000427897 TMEM223A0PJW6 202 aa12.64□□□□□ -0.39
HSPG2-205ENST00000427897 SNRPEP62304 92 aaKnown RBP12.64□□□□□ -0.39
HSPG2-205ENST00000427897 LINC01545Q5VT33 79 aa12.64□□□□□ -0.39
HSPG2-205ENST00000427897 KRTAP11-1Q8IUC1 163 aa12.64□□□□□ -0.39
HSPG2-205ENST00000427897 C20orf202A1L168 122 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms