RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 CMC4P56277 68 aaPredicted RBP11.56□□□□□ -0.56
PKP4-205ENST00000426248 SLPIP03973 132 aa11.54□□□□□ -0.56
PKP4-205ENST00000426248 DEFB121Q5J5C9 76 aa11.54□□□□□ -0.56
PKP4-205ENST00000426248 C2orf48Q96LS8 159 aa11.54□□□□□ -0.56
PKP4-205ENST00000426248 C16orf95Q9H693 158 aa11.54□□□□□ -0.56
PKP4-205ENST00000426248 M0QY20 66 aa11.53□□□□□ -0.56
PKP4-205ENST00000426248 LECT2O14960 151 aa11.53□□□□□ -0.56
PKP4-205ENST00000426248 C5orf38Q86SI9 138 aa11.53□□□□□ -0.56
PKP4-205ENST00000426248 NSD1Q96L73 2696 aaPredicted RBP11.53□□□□□ -0.56
PKP4-205ENST00000426248 LINC00336Q6ZUF6 198 aa11.53□□□□□ -0.56
PKP4-205ENST00000426248 LINC00846Q9NV44 126 aa11.53□□□□□ -0.56
PKP4-205ENST00000426248 PRO0628Q9UI54 55 aa11.53□□□□□ -0.56
PKP4-205ENST00000426248 STAB1Q9NY15 2570 aa11.53□□□□□ -0.56
PKP4-205ENST00000426248 OXTP01178 125 aa11.52□□□□□ -0.57
PKP4-205ENST00000426248 C9orf66Q5T8R8 295 aa11.52□□□□□ -0.57
PKP4-205ENST00000426248 LITAFQ99732 161 aa11.52□□□□□ -0.57
PKP4-205ENST00000426248 V9GYY9 64 aa11.52□□□□□ -0.57
PKP4-205ENST00000426248 KLK9Q2XQG4 91 aa11.51□□□□□ -0.57
PKP4-205ENST00000426248 S100A7L2Q5SY68 101 aa11.51□□□□□ -0.57
PKP4-205ENST00000426248 ENHOQ6UWT2 76 aa11.51□□□□□ -0.57
PKP4-205ENST00000426248 RPL36AP83881 106 aaKnown RBP11.51□□□□□ -0.57
PKP4-205ENST00000426248 RPL36ALQ969Q0 106 aaKnown RBP11.51□□□□□ -0.57
PKP4-205ENST00000426248 SNURFQ9Y675 71 aa11.51□□□□□ -0.57
PKP4-205ENST00000426248 FHL2Q14192 279 aa11.5□□□□□ -0.57
PKP4-205ENST00000426248 MED14OSP0DP75 135 aa11.5□□□□□ -0.57
PKP4-205ENST00000426248 FAM218AQ96MZ4 157 aa11.5□□□□□ -0.57
PKP4-205ENST00000426248 LINC00315P59091 139 aa11.5□□□□□ -0.57
PKP4-205ENST00000426248 IGLV10-54A0A075B6I4 117 aa11.49□□□□□ -0.57
PKP4-205ENST00000426248 MPLKIPQ8TAP9 179 aa11.49□□□□□ -0.57
PKP4-205ENST00000426248 CUBNO60494 3623 aa11.49□□□□□ -0.57
PKP4-205ENST00000426248 HAMPP81172 84 aa11.49□□□□□ -0.57
PKP4-205ENST00000426248 LINC00482Q8N8I6 264 aa11.48□□□□□ -0.57
PKP4-205ENST00000426248 KIF25-AS1Q9Y6Z4 181 aa11.48□□□□□ -0.57
PKP4-205ENST00000426248 ODF3L2Q3SX64 289 aa11.48□□□□□ -0.57
PKP4-205ENST00000426248 NBPF19A0A087WUL8 3843 aa11.47□□□□□ -0.57
PKP4-205ENST00000426248 C6orf226Q5I0X4 101 aa11.47□□□□□ -0.57
PKP4-205ENST00000426248 MRPS36P82909 103 aaKnown RBP11.47□□□□□ -0.57
PKP4-205ENST00000426248 NOP10Q9NPE3 64 aaKnown RBP11.46□□□□□ -0.57
PKP4-205ENST00000426248 NDUFC2O95298 119 aa11.46□□□□□ -0.57
PKP4-205ENST00000426248 Q5XG85 94 aa11.46□□□□□ -0.57
PKP4-205ENST00000426248 C1orf195Q5TG92 126 aa11.46□□□□□ -0.58
PKP4-205ENST00000426248 TRAV13-2A0A0B4J235 113 aa11.45□□□□□ -0.58
PKP4-205ENST00000426248 Q6JHZ5 121 aa11.45□□□□□ -0.58
PKP4-205ENST00000426248 UBL5Q9BZL1 73 aa11.45□□□□□ -0.58
PKP4-205ENST00000426248 FAM19A1Q7Z5A9 133 aa11.45□□□□□ -0.58
PKP4-205ENST00000426248 TRBV6-5A0A0K0K1A5 114 aa11.45□□□□□ -0.58
PKP4-205ENST00000426248 SEC61GP60059 68 aa11.45□□□□□ -0.58
PKP4-205ENST00000426248 SND1-IT1Q9HBX3 110 aa11.45□□□□□ -0.58
PKP4-205ENST00000426248 OXLD1Q5BKU9 147 aa11.44□□□□□ -0.58
PKP4-205ENST00000426248 PDZD2O15018 2839 aa11.44□□□□□ -0.58
PKP4-205ENST00000426248 A0A087WYN8 130 aa11.43□□□□□ -0.58
PKP4-205ENST00000426248 LINC01561Q8N1V8 128 aa11.43□□□□□ -0.58
PKP4-205ENST00000426248 LINC00467Q9BRT7 94 aa11.43□□□□□ -0.58
PKP4-205ENST00000426248 OVOL2Q9BRP0 275 aa11.43□□□□□ -0.58
PKP4-205ENST00000426248 NDUFA1O15239 70 aa11.43□□□□□ -0.58
PKP4-205ENST00000426248 DEFB135Q30KP9 77 aa11.43□□□□□ -0.58
PKP4-205ENST00000426248 KLLNB2CW77 178 aa11.42□□□□□ -0.58
PKP4-205ENST00000426248 MIR7-3HGQ8N6C7 128 aa11.42□□□□□ -0.58
PKP4-205ENST00000426248 UPK3BQ9BT76 320 aa11.42□□□□□ -0.58
PKP4-205ENST00000426248 IGLV1-51P01701 117 aa11.42□□□□□ -0.58
PKP4-205ENST00000426248 XCL1P47992 114 aa11.42□□□□□ -0.58
PKP4-205ENST00000426248 LINC01600Q96MT4 127 aa11.4□□□□□ -0.58
PKP4-205ENST00000426248 ORMDL1Q9P0S3 153 aa11.4□□□□□ -0.58
PKP4-205ENST00000426248 KRTAP24-1Q3LI83 254 aa11.39□□□□□ -0.59
PKP4-205ENST00000426248 C9orf129Q5T035 196 aaKnown RBP11.39□□□□□ -0.59
PKP4-205ENST00000426248 SOSTDC1Q6X4U4 206 aa11.39□□□□□ -0.59
PKP4-205ENST00000426248 RPL28P46779 137 aaKnown RBP11.39□□□□□ -0.59
PKP4-205ENST00000426248 OTOGQ6ZRI0 2925 aa11.39□□□□□ -0.59
PKP4-205ENST00000426248 SERP1Q9Y6X1 66 aa11.38□□□□□ -0.59
PKP4-205ENST00000426248 TIMM17BO60830 172 aa11.38□□□□□ -0.59
PKP4-205ENST00000426248 KRTAP10-3P60369 221 aa11.38□□□□□ -0.59
PKP4-205ENST00000426248 FAM222AQ5U5X8 452 aa11.38□□□□□ -0.59
PKP4-205ENST00000426248 F8WEM9 126 aa11.38□□□□□ -0.59
PKP4-205ENST00000426248 COX6A2Q02221 97 aa11.38□□□□□ -0.59
PKP4-205ENST00000426248 APOC4P55056 127 aa11.37□□□□□ -0.59
PKP4-205ENST00000426248 LAMTOR3Q9UHA4 124 aa11.37□□□□□ -0.59
PKP4-205ENST00000426248 Q9UF83 564 aa11.37□□□□□ -0.59
PKP4-205ENST00000426248 SMIM11BQ8TCY0 68 aa11.37□□□□□ -0.59
PKP4-205ENST00000426248 PRB2P02812 416 aaPredicted RBP11.36□□□□□ -0.59
PKP4-205ENST00000426248 C9orf85Q96MD7 179 aa11.36□□□□□ -0.59
PKP4-205ENST00000426248 RMI2Q96E14 147 aa11.36□□□□□ -0.59
PKP4-205ENST00000426248 VPS13CQ709C8 3753 aa11.36□□□□□ -0.59
PKP4-205ENST00000426248 UBE2D4Q9Y2X8 147 aa11.36□□□□□ -0.59
PKP4-205ENST00000426248 SMIM26A0A096LP01 95 aa11.35□□□□□ -0.59
PKP4-205ENST00000426248 Q6ZTI0 123 aa11.34□□□□□ -0.59
PKP4-205ENST00000426248 H0YGX0 51 aa11.34□□□□□ -0.59
PKP4-205ENST00000426248 LINC00474Q9P2X8 69 aa11.33□□□□□ -0.6
PKP4-205ENST00000426248 NDUFC2-KCTD14E9PQ53 114 aa11.33□□□□□ -0.6
PKP4-205ENST00000426248 ANGP03950 147 aaKnown RBP11.32□□□□□ -0.6
PKP4-205ENST00000426248 SCXQ7RTU7 201 aa11.31□□□□□ -0.6
PKP4-205ENST00000426248 LINC00337Q8N6G1 96 aa11.31□□□□□ -0.6
PKP4-205ENST00000426248 F8WDY8 70 aa11.31□□□□□ -0.6
PKP4-205ENST00000426248 DAD1P61803 113 aa11.31□□□□□ -0.6
PKP4-205ENST00000426248 CYSRT1A8MQ03 144 aa11.3□□□□□ -0.6
PKP4-205ENST00000426248 C16orf74Q96GX8 76 aa11.3□□□□□ -0.6
PKP4-205ENST00000426248 SS18Q15532 418 aa11.29□□□□□ -0.6
PKP4-205ENST00000426248 C1orf158Q8N1D5 194 aa11.29□□□□□ -0.6
PKP4-205ENST00000426248 LINC00242Q5T6M2 205 aa11.28□□□□□ -0.6
PKP4-205ENST00000426248 CHCHD7Q9BUK0 85 aa11.28□□□□□ -0.6
PKP4-205ENST00000426248 SMIM1B2RUZ4 78 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms