RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 C9orf129Q5T035 196 aaKnown RBP5.28□□□□□ -1.56
SMARCC1-202ENST00000425518 F8P00451 2351 aa5.27□□□□□ -1.57
SMARCC1-202ENST00000425518 AKAP9Q99996 3911 aa5.27□□□□□ -1.57
SMARCC1-202ENST00000425518 FAM222AQ5U5X8 452 aa5.27□□□□□ -1.57
SMARCC1-202ENST00000425518 TMEM86BQ8N661 226 aa5.27□□□□□ -1.57
SMARCC1-202ENST00000425518 IMUPQ9GZP8 106 aa5.27□□□□□ -1.57
SMARCC1-202ENST00000425518 LINC01006Q8NI28 216 aa5.27□□□□□ -1.57
SMARCC1-202ENST00000425518 IGKV3D-7A0A0C4DH55 119 aa5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 MAST4O15021 2626 aa5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 A0A087WZ39 114 aa5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 LINC00959A0A1B0GUT2 108 aa5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 IBA57-AS1B1ANH7 110 aa5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 NCR3O14931 201 aa5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 GYPEP15421 78 aa5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 CMC4P56277 68 aaPredicted RBP5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 H0YGX0 51 aa5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 PRR3P79522 188 aaKnown RBP5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 C9orf153Q5TBE3 101 aa5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 SDIM1Q6ZPB5 146 aa5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 LRRC75A-AS1Q8N1F1 130 aa5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 OVOL2Q9BRP0 275 aa5.26□□□□□ -1.57
SMARCC1-202ENST00000425518 KRTAP1-3Q8IUG1 177 aa5.25□□□□□ -1.57
SMARCC1-202ENST00000425518 CSNK1G2-AS1Q8NCQ2 148 aa5.25□□□□□ -1.57
SMARCC1-202ENST00000425518 C19orf73Q9NVV2 129 aa5.25□□□□□ -1.57
SMARCC1-202ENST00000425518 UBR5O95071 2799 aaPredicted RBP5.25□□□□□ -1.57
SMARCC1-202ENST00000425518 IGLV1-51P01701 117 aa5.25□□□□□ -1.57
SMARCC1-202ENST00000425518 RNASE1P07998 156 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-202ENST00000425518 SS18Q15532 418 aa5.24□□□□□ -1.57
SMARCC1-202ENST00000425518 IGLV10-54A0A075B6I4 117 aa5.24□□□□□ -1.57
SMARCC1-202ENST00000425518 C3orf22Q8N5N4 141 aa5.23□□□□□ -1.57
SMARCC1-202ENST00000425518 LINC00846Q9NV44 126 aa5.23□□□□□ -1.57
SMARCC1-202ENST00000425518 DEFB4AO15263 64 aa5.23□□□□□ -1.57
SMARCC1-202ENST00000425518 PPDPFQ9H3Y8 114 aa5.23□□□□□ -1.57
SMARCC1-202ENST00000425518 ORMDL1Q9P0S3 153 aa5.22□□□□□ -1.57
SMARCC1-202ENST00000425518 KLK5Q9Y337 293 aaPredicted RBP5.22□□□□□ -1.57
SMARCC1-202ENST00000425518 A0A087WVE0 104 aa5.22□□□□□ -1.57
SMARCC1-202ENST00000425518 LINC00269Q8N2A0 174 aa5.22□□□□□ -1.57
SMARCC1-202ENST00000425518 UQCRQO14949 82 aa5.21□□□□□ -1.57
SMARCC1-202ENST00000425518 CXCL5P42830 114 aa5.21□□□□□ -1.57
SMARCC1-202ENST00000425518 C9orf116Q5BN46 136 aaPredicted RBP5.21□□□□□ -1.57
SMARCC1-202ENST00000425518 TMEM126AQ9H061 195 aa5.21□□□□□ -1.57
SMARCC1-202ENST00000425518 ITPR2Q14571 2701 aa5.21□□□□□ -1.58
SMARCC1-202ENST00000425518 Q8N3U1 123 aa5.21□□□□□ -1.58
SMARCC1-202ENST00000425518 A0A1B0GX51 115 aa5.2□□□□□ -1.58
SMARCC1-202ENST00000425518 ANGP03950 147 aaKnown RBP5.2□□□□□ -1.58
SMARCC1-202ENST00000425518 HIST1H4AP62805 103 aaKnown RBP5.2□□□□□ -1.58
SMARCC1-202ENST00000425518 PRO0255Q9UI72 69 aa5.2□□□□□ -1.58
SMARCC1-202ENST00000425518 TEP1Q99973 2627 aaKnown RBP5.2□□□□□ -1.58
SMARCC1-202ENST00000425518 Q8IZM0 81 aa5.2□□□□□ -1.58
SMARCC1-202ENST00000425518 LINC00526Q96FQ7 95 aa5.2□□□□□ -1.58
SMARCC1-202ENST00000425518 FAM110AQ9BQ89 295 aa5.2□□□□□ -1.58
SMARCC1-202ENST00000425518 COX7CP15954 63 aa5.19□□□□□ -1.58
SMARCC1-202ENST00000425518 LINC00482Q8N8I6 264 aa5.19□□□□□ -1.58
SMARCC1-202ENST00000425518 hADV29S1A0JD25 119 aa5.19□□□□□ -1.58
SMARCC1-202ENST00000425518 KIR2DL5BQ8NHK3 375 aa5.19□□□□□ -1.58
SMARCC1-202ENST00000425518 CHCHD10Q8WYQ3 142 aaPredicted RBP5.19□□□□□ -1.58
SMARCC1-202ENST00000425518 A0A1B0GUV1 79 aa5.18□□□□□ -1.58
SMARCC1-202ENST00000425518 ATOX1O00244 68 aa5.18□□□□□ -1.58
SMARCC1-202ENST00000425518 Q8N814 137 aa5.18□□□□□ -1.58
SMARCC1-202ENST00000425518 WFDC9Q8NEX5 89 aa5.18□□□□□ -1.58
SMARCC1-202ENST00000425518 OBSCN-AS1Q96MR7 158 aa5.18□□□□□ -1.58
SMARCC1-202ENST00000425518 C16orf95Q9H693 158 aa5.18□□□□□ -1.58
SMARCC1-202ENST00000425518 HTN3P15516 51 aa5.18□□□□□ -1.58
SMARCC1-202ENST00000425518 NANOS2P60321 138 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-202ENST00000425518 RPL18AQ02543 176 aaKnown RBP5.18□□□□□ -1.58
SMARCC1-202ENST00000425518 S100A7L2Q5SY68 101 aa5.18□□□□□ -1.58
SMARCC1-202ENST00000425518 LY6G6DO95868 133 aa5.17□□□□□ -1.58
SMARCC1-202ENST00000425518 C6orf99Q4VX62 202 aa5.17□□□□□ -1.58
SMARCC1-202ENST00000425518 Q6JHZ5 121 aa5.17□□□□□ -1.58
SMARCC1-202ENST00000425518 X6R8D5 127 aa5.17□□□□□ -1.58
SMARCC1-202ENST00000425518 VWFP04275 2813 aa5.17□□□□□ -1.58
SMARCC1-202ENST00000425518 REG3AQ06141 175 aa5.17□□□□□ -1.58
SMARCC1-202ENST00000425518 DEFB135Q30KP9 77 aa5.17□□□□□ -1.58
SMARCC1-202ENST00000425518 CD164L2Q6UWJ8 174 aa5.17□□□□□ -1.58
SMARCC1-202ENST00000425518 C2orf48Q96LS8 159 aa5.17□□□□□ -1.58
SMARCC1-202ENST00000425518 CCKP06307 115 aa5.17□□□□□ -1.58
SMARCC1-202ENST00000425518 KIAA0087Q14695 138 aa5.17□□□□□ -1.58
SMARCC1-202ENST00000425518 LOC107984640A0A0U1RRK4 108 aa5.16□□□□□ -1.58
SMARCC1-202ENST00000425518 C6orf223Q8N319 242 aa5.16□□□□□ -1.58
SMARCC1-202ENST00000425518 USP17L23D6RBM5 183 aa5.16□□□□□ -1.58
SMARCC1-202ENST00000425518 TMEM256-PLSCR3K7ERE1 68 aa5.16□□□□□ -1.58
SMARCC1-202ENST00000425518 HILS1P60008 231 aa5.16□□□□□ -1.58
SMARCC1-202ENST00000425518 KRTAP1-1Q07627 177 aa5.16□□□□□ -1.58
SMARCC1-202ENST00000425518 LINC01561Q8N1V8 128 aa5.16□□□□□ -1.58
SMARCC1-202ENST00000425518 SMR3AQ99954 134 aa5.16□□□□□ -1.58
SMARCC1-202ENST00000425518 JMJD7-PLA2G4BH0Y9G9 81 aa5.15□□□□□ -1.58
SMARCC1-202ENST00000425518 KRTAP10-3P60369 221 aa5.15□□□□□ -1.58
SMARCC1-202ENST00000425518 UNQ6190/PRO20217Q6UXQ8 127 aa5.15□□□□□ -1.58
SMARCC1-202ENST00000425518 Q8NDZ9 215 aa5.15□□□□□ -1.58
SMARCC1-202ENST00000425518 C10orf25Q5T742 122 aa5.15□□□□□ -1.59
SMARCC1-202ENST00000425518 LINC00612Q8N6U2 182 aa5.15□□□□□ -1.59
SMARCC1-202ENST00000425518 DAD1P61803 113 aa5.15□□□□□ -1.59
SMARCC1-202ENST00000425518 SPATA3Q8NHX4 192 aa5.15□□□□□ -1.59
SMARCC1-202ENST00000425518 CYSTM1Q9H1C7 97 aa5.15□□□□□ -1.59
SMARCC1-202ENST00000425518 TRAV23DV6A0A075B6W5 121 aa5.14□□□□□ -1.59
SMARCC1-202ENST00000425518 LAMTOR3Q9UHA4 124 aa5.14□□□□□ -1.59
SMARCC1-202ENST00000425518 ENHOQ6UWT2 76 aa5.14□□□□□ -1.59
SMARCC1-202ENST00000425518 FAM19A1Q7Z5A9 133 aa5.14□□□□□ -1.59
SMARCC1-202ENST00000425518 SERP2Q8N6R1 65 aa5.14□□□□□ -1.59
SMARCC1-202ENST00000425518 CRYGAP11844 174 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms