RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, human

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-208	ENST00000422080	DIRC1	Q969H9	104 aa		10.84	□□□□□ -0.67
HDLBP-208	ENST00000422080	SCGB3A1	Q96QR1	104 aa		10.84	□□□□□ -0.67
HDLBP-208	ENST00000422080	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.84	□□□□□ -0.67
HDLBP-208	ENST00000422080	GEMIN7	Q9H840	131 aa	Known RBP	10.84	□□□□□ -0.67
HDLBP-208	ENST00000422080	CDKN2A-AS1	Q9UH64	79 aa		10.84	□□□□□ -0.67
HDLBP-208	ENST00000422080	LINC01546	A6NGU7	62 aa		10.83	□□□□□ -0.68
HDLBP-208	ENST00000422080	COX19	Q49B96	90 aa		10.83	□□□□□ -0.68
HDLBP-208	ENST00000422080	C9orf129	Q5T035	196 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-208	ENST00000422080	KRTAP11-1	Q8IUC1	163 aa		10.83	□□□□□ -0.68
HDLBP-208	ENST00000422080		M0QXV9	152 aa		10.82	□□□□□ -0.68
HDLBP-208	ENST00000422080	ODF1	Q14990	250 aa		10.82	□□□□□ -0.68
HDLBP-208	ENST00000422080	UBE2B	P63146	152 aa		10.8	□□□□□ -0.68
HDLBP-208	ENST00000422080	TINCR	A0A1B0GVN0	87 aa		10.79	□□□□□ -0.68
HDLBP-208	ENST00000422080		F8VRH5	84 aa		10.79	□□□□□ -0.68
HDLBP-208	ENST00000422080	CXCL5	P42830	114 aa		10.79	□□□□□ -0.68
HDLBP-208	ENST00000422080	C10orf91	Q5T1B1	145 aa		10.79	□□□□□ -0.68
HDLBP-208	ENST00000422080	COMMD7	Q86VX2	200 aa		10.79	□□□□□ -0.68
HDLBP-208	ENST00000422080		H0Y9J4	135 aa		10.78	□□□□□ -0.68
HDLBP-208	ENST00000422080	LINC00469	Q8N7U9	141 aa		10.78	□□□□□ -0.68
HDLBP-208	ENST00000422080	CST9L	Q9H4G1	147 aa		10.78	□□□□□ -0.68
HDLBP-208	ENST00000422080	IGLV5-45	A0A087WSX0	123 aa		10.77	□□□□□ -0.69
HDLBP-208	ENST00000422080	FABP9	Q0Z7S8	132 aa		10.77	□□□□□ -0.69
HDLBP-208	ENST00000422080	PDZD11	Q5EBL8	140 aa		10.77	□□□□□ -0.69
HDLBP-208	ENST00000422080	MRPL18	Q9H0U6	180 aa	Known RBP	10.77	□□□□□ -0.69
HDLBP-208	ENST00000422080	LRP2	P98164	4655 aa		10.76	□□□□□ -0.69
HDLBP-208	ENST00000422080	SMIM1	B2RUZ4	78 aa		10.76	□□□□□ -0.69
HDLBP-208	ENST00000422080	RHEB	Q15382	184 aa		10.76	□□□□□ -0.69
HDLBP-208	ENST00000422080	FA2H	Q7L5A8	372 aa		10.76	□□□□□ -0.69
HDLBP-208	ENST00000422080	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.76	□□□□□ -0.69
HDLBP-208	ENST00000422080	C22orf24	Q9Y442	160 aa		10.76	□□□□□ -0.69
HDLBP-208	ENST00000422080	PMVK	Q15126	192 aa		10.75	□□□□□ -0.69
HDLBP-208	ENST00000422080	LBH	Q53QV2	105 aa	Predicted RBP	10.75	□□□□□ -0.69
HDLBP-208	ENST00000422080	XAGE1A	Q9HD64	81 aa		10.75	□□□□□ -0.69
HDLBP-208	ENST00000422080	RPS10P5	Q9NQ39	176 aa		10.75	□□□□□ -0.69
HDLBP-208	ENST00000422080	SMCO4	Q9NRQ5	59 aa		10.75	□□□□□ -0.69
HDLBP-208	ENST00000422080	COX7B2	Q8TF08	81 aa		10.74	□□□□□ -0.69
HDLBP-208	ENST00000422080	PRR26	Q8N8Z3	221 aa		10.73	□□□□□ -0.69
HDLBP-208	ENST00000422080	TP73-AS1	Q9UF72	201 aa		10.72	□□□□□ -0.69
HDLBP-208	ENST00000422080	IGLV1-50	A0A075B6I6	118 aa		10.71	□□□□□ -0.69
HDLBP-208	ENST00000422080	NUPR1	O60356	82 aa		10.71	□□□□□ -0.69
HDLBP-208	ENST00000422080	ZNF861P	O60384	105 aa		10.7	□□□□□ -0.7
HDLBP-208	ENST00000422080	KRTAP1-4	P0C5Y4	121 aa		10.7	□□□□□ -0.7
HDLBP-208	ENST00000422080		H3BRM9	83 aa		10.69	□□□□□ -0.7
HDLBP-208	ENST00000422080	SPINK8	P0C7L1	97 aa		10.69	□□□□□ -0.7
HDLBP-208	ENST00000422080	LINC00614	P0C842	121 aa		10.68	□□□□□ -0.7
HDLBP-208	ENST00000422080	MRPL55	Q7Z7F7	128 aa	Known RBP	10.68	□□□□□ -0.7
HDLBP-208	ENST00000422080	TRAPPC1	Q9Y5R8	145 aa		10.68	□□□□□ -0.7
HDLBP-208	ENST00000422080	IGLC3	P0DOY3	106 aa		10.67	□□□□□ -0.7
HDLBP-208	ENST00000422080		A0A096LNJ9	63 aa		10.66	□□□□□ -0.7
HDLBP-208	ENST00000422080	C18orf32	Q8TCD1	76 aa		10.66	□□□□□ -0.7
HDLBP-208	ENST00000422080	URB1-AS1	Q96HZ7	61 aa		10.65	□□□□□ -0.7
HDLBP-208	ENST00000422080	IGLV5-39	A0A0G2JS06	123 aa		10.64	□□□□□ -0.71
HDLBP-208	ENST00000422080	ATP5L	O75964	103 aa		10.64	□□□□□ -0.71
HDLBP-208	ENST00000422080	HBD	P02042	147 aa		10.64	□□□□□ -0.71
HDLBP-208	ENST00000422080	RPL13A	P40429	203 aa	Known RBP	10.64	□□□□□ -0.71
HDLBP-208	ENST00000422080	NDUFA6	P56556	154 aa		10.64	□□□□□ -0.71
HDLBP-208	ENST00000422080	RAB5B	P61020	215 aa		10.64	□□□□□ -0.71
HDLBP-208	ENST00000422080	LINC00167	Q96N53	147 aa		10.64	□□□□□ -0.71
HDLBP-208	ENST00000422080	IGLV5-37	A0A075B6J1	123 aa		10.63	□□□□□ -0.71
HDLBP-208	ENST00000422080	BCE1	O60756	84 aa		10.63	□□□□□ -0.71
HDLBP-208	ENST00000422080	SNAPIN	O95295	136 aa		10.62	□□□□□ -0.71
HDLBP-208	ENST00000422080	APOC3	P02656	99 aa		10.62	□□□□□ -0.71
HDLBP-208	ENST00000422080	ZNF22	P17026	224 aa	Predicted RBP	10.61	□□□□□ -0.71
HDLBP-208	ENST00000422080	RPL28	P46779	137 aa	Known RBP	10.61	□□□□□ -0.71
HDLBP-208	ENST00000422080	NDUFA5	Q16718	116 aa		10.61	□□□□□ -0.71
HDLBP-208	ENST00000422080	SVBP	Q8N300	66 aa		10.61	□□□□□ -0.71
HDLBP-208	ENST00000422080	RPL37AP8	A6NKH3	93 aa		10.6	□□□□□ -0.71
HDLBP-208	ENST00000422080	PMCHL1	Q16048	86 aa		10.59	□□□□□ -0.71
HDLBP-208	ENST00000422080	NKAPP1	Q8N9T2	125 aa		10.59	□□□□□ -0.71
HDLBP-208	ENST00000422080	GAGE10	A6NGK3	116 aa		10.58	□□□□□ -0.72
HDLBP-208	ENST00000422080	PFN2	P35080	140 aa		10.58	□□□□□ -0.72
HDLBP-208	ENST00000422080	BAGE3	Q86Y29	109 aa		10.58	□□□□□ -0.72
HDLBP-208	ENST00000422080	COX17	Q14061	63 aa		10.57	□□□□□ -0.72
HDLBP-208	ENST00000422080	C11orf86	A6NJI1	115 aa		10.56	□□□□□ -0.72
HDLBP-208	ENST00000422080	SFTA2	Q6UW10	78 aa		10.56	□□□□□ -0.72
HDLBP-208	ENST00000422080	ERG28	Q9UKR5	140 aa		10.56	□□□□□ -0.72
HDLBP-208	ENST00000422080	RNF213	Q63HN8	5207 aa		10.56	□□□□□ -0.72
HDLBP-208	ENST00000422080	TMEM170B	Q5T4T1	132 aa		10.55	□□□□□ -0.72
HDLBP-208	ENST00000422080	KRTAP13-1	Q8IUC0	172 aa		10.54	□□□□□ -0.72
HDLBP-208	ENST00000422080	YPEL4	Q96NS1	127 aa		10.54	□□□□□ -0.72
HDLBP-208	ENST00000422080	SND1-IT1	Q9HBX3	110 aa		10.54	□□□□□ -0.72
HDLBP-208	ENST00000422080	LPA	P08519	4548 aa		10.53	□□□□□ -0.72
HDLBP-208	ENST00000422080	RPL24	P83731	157 aa	Known RBP	10.53	□□□□□ -0.72
HDLBP-208	ENST00000422080	CHCHD1	Q96BP2	118 aa	Known RBP	10.53	□□□□□ -0.72
HDLBP-208	ENST00000422080	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.53	□□□□□ -0.72
HDLBP-208	ENST00000422080	VPREB1	P12018	145 aa		10.52	□□□□□ -0.73
HDLBP-208	ENST00000422080	UBE2A	P49459	152 aa		10.52	□□□□□ -0.73
HDLBP-208	ENST00000422080	TRAV12-1	A0A0B4J245	112 aa		10.51	□□□□□ -0.73
HDLBP-208	ENST00000422080	SCO1	O75880	301 aa		10.51	□□□□□ -0.73
HDLBP-208	ENST00000422080	CRYGA	P11844	174 aa		10.51	□□□□□ -0.73
HDLBP-208	ENST00000422080	ZNF625	Q96I27	306 aa	Predicted RBP	10.51	□□□□□ -0.73
HDLBP-208	ENST00000422080	IGKV2-28	A0A075B6P5	120 aa		10.5	□□□□□ -0.73
HDLBP-208	ENST00000422080		A0A087X002	238 aa		10.5	□□□□□ -0.73
HDLBP-208	ENST00000422080	IGKV2D-28	P01615	120 aa		10.5	□□□□□ -0.73
HDLBP-208	ENST00000422080	IFI27L1	Q96BM0	104 aa		10.5	□□□□□ -0.73
HDLBP-208	ENST00000422080	TMEM223	A0PJW6	202 aa		10.48	□□□□□ -0.73
HDLBP-208	ENST00000422080	TYMSOS	Q8TAI1	123 aa		10.47	□□□□□ -0.73
HDLBP-208	ENST00000422080	LINC00158	P58513	81 aa		10.46	□□□□□ -0.73
HDLBP-208	ENST00000422080	PRR4	Q16378	134 aa		10.46	□□□□□ -0.73
HDLBP-208	ENST00000422080	FAM229B	Q4G0N7	80 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms