RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 FAT3Q8TDW7 4589 aa16.53■□□□□ 0.24
CDK9-202ENST00000421939 KRTAP29-1A8MX34 341 aaPredicted RBP16.52■□□□□ 0.24
CDK9-202ENST00000421939 RAB5BP61020 215 aa16.52■□□□□ 0.24
CDK9-202ENST00000421939 Q8IZM0 81 aa16.52■□□□□ 0.24
CDK9-202ENST00000421939 A0A1W2PNN7 141 aa16.51■□□□□ 0.23
CDK9-202ENST00000421939 J3QL48 77 aa16.51■□□□□ 0.23
CDK9-202ENST00000421939 C9orf116Q5BN46 136 aaPredicted RBP16.51■□□□□ 0.23
CDK9-202ENST00000421939 Q6ZRP5 223 aa16.51■□□□□ 0.23
CDK9-202ENST00000421939 IGLV5-45A0A087WSX0 123 aa16.5■□□□□ 0.23
CDK9-202ENST00000421939 PMCHL1Q16048 86 aa16.5■□□□□ 0.23
CDK9-202ENST00000421939 CKS1BP61024 79 aa16.49■□□□□ 0.23
CDK9-202ENST00000421939 PRR3P79522 188 aaKnown RBP16.49■□□□□ 0.23
CDK9-202ENST00000421939 C6orf226Q5I0X4 101 aa16.49■□□□□ 0.23
CDK9-202ENST00000421939 SMIM1B2RUZ4 78 aa16.47■□□□□ 0.23
CDK9-202ENST00000421939 GAGE2EQ4V326 116 aa16.46■□□□□ 0.23
CDK9-202ENST00000421939 PDZD11Q5EBL8 140 aa16.46■□□□□ 0.23
CDK9-202ENST00000421939 GAGE2DQ9UEU5 116 aa16.46■□□□□ 0.23
CDK9-202ENST00000421939 NDUFC2-KCTD14E9PQ53 114 aa16.45■□□□□ 0.22
CDK9-202ENST00000421939 OXTP01178 125 aa16.44■□□□□ 0.22
CDK9-202ENST00000421939 NDUFA6P56556 154 aa16.44■□□□□ 0.22
CDK9-202ENST00000421939 ATP5LO75964 103 aa16.43■□□□□ 0.22
CDK9-202ENST00000421939 CXCL5P42830 114 aa16.43■□□□□ 0.22
CDK9-202ENST00000421939 F8VRH5 84 aa16.42■□□□□ 0.22
CDK9-202ENST00000421939 IGLC3P0DOY3 106 aa16.42■□□□□ 0.22
CDK9-202ENST00000421939 CHCHD1Q96BP2 118 aaKnown RBP16.42■□□□□ 0.22
CDK9-202ENST00000421939 SPINK8P0C7L1 97 aa16.41■□□□□ 0.22
CDK9-202ENST00000421939 FAM168BA1KXE4 195 aa16.4■□□□□ 0.22
CDK9-202ENST00000421939 H3BRM9 83 aa16.4■□□□□ 0.22
CDK9-202ENST00000421939 COX7B2Q8TF08 81 aa16.4■□□□□ 0.22
CDK9-202ENST00000421939 PHF5AQ7RTV0 110 aaKnown RBP16.39■□□□□ 0.21
CDK9-202ENST00000421939 TRGC2P03986 189 aa16.38■□□□□ 0.21
CDK9-202ENST00000421939 FAM19A5Q7Z5A7 132 aaPredicted RBP16.38■□□□□ 0.21
CDK9-202ENST00000421939 BAGE3Q86Y29 109 aa16.36■□□□□ 0.21
CDK9-202ENST00000421939 ZNF22P17026 224 aaPredicted RBP16.35■□□□□ 0.21
CDK9-202ENST00000421939 C9orf129Q5T035 196 aaKnown RBP16.35■□□□□ 0.21
CDK9-202ENST00000421939 HSBP1O75506 76 aa16.33■□□□□ 0.2
CDK9-202ENST00000421939 KRTAP7-1Q8IUC3 87 aa16.33■□□□□ 0.2
CDK9-202ENST00000421939 PSORS1C2Q9UIG4 136 aa16.33■□□□□ 0.2
CDK9-202ENST00000421939 IGLV5-39A0A0G2JS06 123 aa16.31■□□□□ 0.2
CDK9-202ENST00000421939 C11orf86A6NJI1 115 aa16.31■□□□□ 0.2
CDK9-202ENST00000421939 M0QXV9 152 aa16.31■□□□□ 0.2
CDK9-202ENST00000421939 COLCA2A8K830 154 aa16.3■□□□□ 0.2
CDK9-202ENST00000421939 IFI27L1Q96BM0 104 aa16.3■□□□□ 0.2
CDK9-202ENST00000421939 XAGE1AQ9HD64 81 aa16.29■□□□□ 0.2
CDK9-202ENST00000421939 SPINK6Q6UWN8 80 aa16.28■□□□□ 0.2
CDK9-202ENST00000421939 CHTOPQ9Y3Y2 248 aaKnown RBP16.28■□□□□ 0.2
CDK9-202ENST00000421939 TRAV12-1A0A0B4J245 112 aa16.27■□□□□ 0.2
CDK9-202ENST00000421939 TMEM170BQ5T4T1 132 aa16.27■□□□□ 0.2
CDK9-202ENST00000421939 FAM19A2Q8N3H0 131 aa16.27■□□□□ 0.2
CDK9-202ENST00000421939 SERF1AO75920 110 aa16.25■□□□□ 0.19
CDK9-202ENST00000421939 LINC00310P59036 64 aa16.25■□□□□ 0.19
CDK9-202ENST00000421939 SRSF9Q13242 221 aaKnown RBP eCLIP16.25■□□□□ 0.19
CDK9-202ENST00000421939 C1orf137Q5JT78 98 aa16.25■□□□□ 0.19
CDK9-202ENST00000421939 SERTAD4-AS1Q5TG53 156 aa16.24■□□□□ 0.19
CDK9-202ENST00000421939 KRTAP11-1Q8IUC1 163 aa16.24■□□□□ 0.19
CDK9-202ENST00000421939 UBE2BP63146 152 aa16.23■□□□□ 0.19
CDK9-202ENST00000421939 MT1HL1P0DM35 61 aa16.22■□□□□ 0.19
CDK9-202ENST00000421939 SCO1O75880 301 aa16.19■□□□□ 0.18
CDK9-202ENST00000421939 REG3GQ6UW15 175 aa16.19■□□□□ 0.18
CDK9-202ENST00000421939 C22orf24Q9Y442 160 aa16.19■□□□□ 0.18
CDK9-202ENST00000421939 LEPROTL1O95214 131 aa16.18■□□□□ 0.18
CDK9-202ENST00000421939 TMEM223A0PJW6 202 aa16.16■□□□□ 0.18
CDK9-202ENST00000421939 IGLV7-43P04211 117 aa16.16■□□□□ 0.18
CDK9-202ENST00000421939 ODF1Q14990 250 aa16.16■□□□□ 0.18
CDK9-202ENST00000421939 SFTA2Q6UW10 78 aa16.16■□□□□ 0.18
CDK9-202ENST00000421939 LINC01600Q96MT4 127 aa16.16■□□□□ 0.18
CDK9-202ENST00000421939 PFN2P35080 140 aa16.15■□□□□ 0.18
CDK9-202ENST00000421939 LBHQ53QV2 105 aaPredicted RBP16.15■□□□□ 0.18
CDK9-202ENST00000421939 TP73-AS1Q9UF72 201 aa16.15■□□□□ 0.18
CDK9-202ENST00000421939 H0Y8G0 127 aa16.14■□□□□ 0.17
CDK9-202ENST00000421939 NUPR1O60356 82 aa16.14■□□□□ 0.17
CDK9-202ENST00000421939 HSPB8Q9UJY1 196 aa16.14■□□□□ 0.17
CDK9-202ENST00000421939 ERG28Q9UKR5 140 aa16.14■□□□□ 0.17
CDK9-202ENST00000421939 MRPL55Q7Z7F7 128 aaKnown RBP16.13■□□□□ 0.17
CDK9-202ENST00000421939 PLA2G2DQ9UNK4 145 aa16.13■□□□□ 0.17
CDK9-202ENST00000421939 TNXBP22105 4242 aa16.12■□□□□ 0.17
CDK9-202ENST00000421939 ZNF625Q96I27 306 aaPredicted RBP16.12■□□□□ 0.17
CDK9-202ENST00000421939 COX17Q14061 63 aa16.1■□□□□ 0.17
CDK9-202ENST00000421939 FABP4P15090 132 aa16.09■□□□□ 0.17
CDK9-202ENST00000421939 DIRC1Q969H9 104 aa16.09■□□□□ 0.17
CDK9-202ENST00000421939 HMCN2Q8NDA2 5059 aa16.09■□□□□ 0.17
CDK9-202ENST00000421939 IGLV5-37A0A075B6J1 123 aa16.08■□□□□ 0.16
CDK9-202ENST00000421939 HIST1H2BKO60814 126 aa16.07■□□□□ 0.16
CDK9-202ENST00000421939 HIST1H2BJP06899 126 aa16.07■□□□□ 0.16
CDK9-202ENST00000421939 HIST1H2BOP23527 126 aa16.07■□□□□ 0.16
CDK9-202ENST00000421939 HIST1H2BBP33778 126 aa16.07■□□□□ 0.16
CDK9-202ENST00000421939 HIST1H2BDP58876 126 aa16.07■□□□□ 0.16
CDK9-202ENST00000421939 HIST1H2BCP62807 126 aa16.07■□□□□ 0.16
CDK9-202ENST00000421939 HIST2H2BEQ16778 126 aa16.07■□□□□ 0.16
CDK9-202ENST00000421939 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.07■□□□□ 0.16
CDK9-202ENST00000421939 HIST1H2BHQ93079 126 aa16.07■□□□□ 0.16
CDK9-202ENST00000421939 HIST1H2BNQ99877 126 aa16.07■□□□□ 0.16
CDK9-202ENST00000421939 HIST1H2BMQ99879 126 aa16.07■□□□□ 0.16
CDK9-202ENST00000421939 SND1-IT1Q9HBX3 110 aa16.07■□□□□ 0.16
CDK9-202ENST00000421939 NKAPP1Q8N9T2 125 aa16.06■□□□□ 0.16
CDK9-202ENST00000421939 PLNP26678 52 aa16.05■□□□□ 0.16
CDK9-202ENST00000421939 H0Y9J4 135 aa16.04■□□□□ 0.16
CDK9-202ENST00000421939 LINC00167Q96N53 147 aa16.04■□□□□ 0.16
CDK9-202ENST00000421939 GAGE10A6NGK3 116 aa16.02■□□□□ 0.16
CDK9-202ENST00000421939 RPL37AP8A6NKH3 93 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms