RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 SMCR5Q8TEV8 140 aa12.77□□□□□ -0.37
PPFIA3-202ENST00000421230 RETNQ9HD89 108 aa12.77□□□□□ -0.37
PPFIA3-202ENST00000421230 SMIM9A6NGZ8 99 aa12.76□□□□□ -0.37
PPFIA3-202ENST00000421230 LINC00643Q86TS7 51 aa12.76□□□□□ -0.37
PPFIA3-202ENST00000421230 SMIM1B2RUZ4 78 aa12.76□□□□□ -0.37
PPFIA3-202ENST00000421230 OVOL2Q9BRP0 275 aa12.76□□□□□ -0.37
PPFIA3-202ENST00000421230 ZNF625Q96I27 306 aaPredicted RBP12.75□□□□□ -0.37
PPFIA3-202ENST00000421230 TMEM126AQ9H061 195 aa12.75□□□□□ -0.37
PPFIA3-202ENST00000421230 C22orf24Q9Y442 160 aa12.75□□□□□ -0.37
PPFIA3-202ENST00000421230 IGHV4-28A0A0C4DH34 117 aa12.74□□□□□ -0.37
PPFIA3-202ENST00000421230 FAM236AA0A1B0GUQ0 79 aa12.74□□□□□ -0.37
PPFIA3-202ENST00000421230 FAM236BA0A1B0GV22 79 aa12.74□□□□□ -0.37
PPFIA3-202ENST00000421230 DAZ4Q86SG3 579 aaKnown RBP12.74□□□□□ -0.37
PPFIA3-202ENST00000421230 PPDPFQ9H3Y8 114 aa12.74□□□□□ -0.37
PPFIA3-202ENST00000421230 DAZ3Q9NR90 486 aaKnown RBP12.74□□□□□ -0.37
PPFIA3-202ENST00000421230 A0A0U1RRA0 63 aa12.73□□□□□ -0.37
PPFIA3-202ENST00000421230 BAALC-AS2P0C853 105 aa12.73□□□□□ -0.37
PPFIA3-202ENST00000421230 TRGV2A0A075B6R0 118 aa12.72□□□□□ -0.37
PPFIA3-202ENST00000421230 FAM222AQ5U5X8 452 aa12.72□□□□□ -0.37
PPFIA3-202ENST00000421230 Q8NAQ8 132 aa12.72□□□□□ -0.37
PPFIA3-202ENST00000421230 CSDC2Q9Y534 153 aaKnown RBP12.72□□□□□ -0.37
PPFIA3-202ENST00000421230 LINC00694P0DN24 101 aa12.72□□□□□ -0.37
PPFIA3-202ENST00000421230 DEFB130BP0DP73 79 aa12.72□□□□□ -0.37
PPFIA3-202ENST00000421230 DEFB130AP0DP74 79 aa12.72□□□□□ -0.37
PPFIA3-202ENST00000421230 TENM3Q9P273 2699 aa12.71□□□□□ -0.37
PPFIA3-202ENST00000421230 F5H768 121 aa12.7□□□□□ -0.38
PPFIA3-202ENST00000421230 MIFP14174 115 aa12.7□□□□□ -0.38
PPFIA3-202ENST00000421230 FAM218AQ96MZ4 157 aa12.7□□□□□ -0.38
PPFIA3-202ENST00000421230 MRAPQ8TCY5 172 aa12.7□□□□□ -0.38
PPFIA3-202ENST00000421230 KRTAP21-3Q3LHN1 58 aa12.69□□□□□ -0.38
PPFIA3-202ENST00000421230 C5orf38Q86SI9 138 aa12.68□□□□□ -0.38
PPFIA3-202ENST00000421230 TRAV13-1A0A0B4J241 112 aa12.68□□□□□ -0.38
PPFIA3-202ENST00000421230 CXCL5P42830 114 aa12.68□□□□□ -0.38
PPFIA3-202ENST00000421230 ATP5G1P05496 136 aa12.67□□□□□ -0.38
PPFIA3-202ENST00000421230 NTM-AS1Q6ZSK4 140 aa12.67□□□□□ -0.38
PPFIA3-202ENST00000421230 C3orf22Q8N5N4 141 aa12.67□□□□□ -0.38
PPFIA3-202ENST00000421230 CELA1Q9UNI1 258 aa12.67□□□□□ -0.38
PPFIA3-202ENST00000421230 LINC00612Q8N6U2 182 aa12.66□□□□□ -0.38
PPFIA3-202ENST00000421230 CDC42SE2Q9NRR3 84 aa12.66□□□□□ -0.38
PPFIA3-202ENST00000421230 INAFM2P0DMQ5 153 aa12.65□□□□□ -0.38
PPFIA3-202ENST00000421230 RPL28P46779 137 aaKnown RBP12.65□□□□□ -0.38
PPFIA3-202ENST00000421230 LYRM9A8MSI8 78 aa12.65□□□□□ -0.38
PPFIA3-202ENST00000421230 TRAV13-2A0A0B4J235 113 aa12.64□□□□□ -0.39
PPFIA3-202ENST00000421230 TRBV10-1A0A0K0K1A3 114 aa12.64□□□□□ -0.39
PPFIA3-202ENST00000421230 UQCRQO14949 82 aa12.64□□□□□ -0.39
PPFIA3-202ENST00000421230 MALP21145 153 aa12.63□□□□□ -0.39
PPFIA3-202ENST00000421230 RPL36AP83881 106 aaKnown RBP12.63□□□□□ -0.39
PPFIA3-202ENST00000421230 RPL36ALQ969Q0 106 aaKnown RBP12.63□□□□□ -0.39
PPFIA3-202ENST00000421230 TRGV4A0A0C4DH28 118 aa12.62□□□□□ -0.39
PPFIA3-202ENST00000421230 LINC00526Q96FQ7 95 aa12.62□□□□□ -0.39
PPFIA3-202ENST00000421230 K7EQD1 137 aa12.62□□□□□ -0.39
PPFIA3-202ENST00000421230 FHL2Q14192 279 aa12.62□□□□□ -0.39
PPFIA3-202ENST00000421230 C9orf153Q5TBE3 101 aa12.62□□□□□ -0.39
PPFIA3-202ENST00000421230 HUWE1Q7Z6Z7 4374 aaKnown RBP12.62□□□□□ -0.39
PPFIA3-202ENST00000421230 SPART-AS1P0CW21 52 aa12.61□□□□□ -0.39
PPFIA3-202ENST00000421230 DAD1P61803 113 aa12.61□□□□□ -0.39
PPFIA3-202ENST00000421230 Q9HAA7 133 aa12.61□□□□□ -0.39
PPFIA3-202ENST00000421230 GAGE2AQ6NT46 116 aa12.6□□□□□ -0.39
PPFIA3-202ENST00000421230 LINC00337Q8N6G1 96 aa12.6□□□□□ -0.39
PPFIA3-202ENST00000421230 TM2D3Q9BRN9 247 aa12.6□□□□□ -0.39
PPFIA3-202ENST00000421230 IGKV2-28A0A075B6P5 120 aa12.6□□□□□ -0.39
PPFIA3-202ENST00000421230 IGKV2D-28P01615 120 aa12.6□□□□□ -0.39
PPFIA3-202ENST00000421230 HIST1H4AP62805 103 aaKnown RBP12.6□□□□□ -0.39
PPFIA3-202ENST00000421230 COL7A1Q02388 2944 aa12.59□□□□□ -0.39
PPFIA3-202ENST00000421230 A0A0J9YWU9 116 aa12.58□□□□□ -0.39
PPFIA3-202ENST00000421230 LOC100131303A0A0U1RQF7 123 aa12.58□□□□□ -0.39
PPFIA3-202ENST00000421230 CRPP02741 224 aa12.58□□□□□ -0.39
PPFIA3-202ENST00000421230 DNAH9Q9NYC9 4486 aa12.57□□□□□ -0.4
PPFIA3-202ENST00000421230 MIR7-3HGQ8N6C7 128 aa12.57□□□□□ -0.4
PPFIA3-202ENST00000421230 C2orf48Q96LS8 159 aa12.57□□□□□ -0.4
PPFIA3-202ENST00000421230 MEGF8Q7Z7M0 2845 aa12.57□□□□□ -0.4
PPFIA3-202ENST00000421230 COX7CP15954 63 aa12.57□□□□□ -0.4
PPFIA3-202ENST00000421230 TRBV6-4A0A1B0GX49 114 aa12.56□□□□□ -0.4
PPFIA3-202ENST00000421230 COX7B2Q8TF08 81 aa12.56□□□□□ -0.4
PPFIA3-202ENST00000421230 OBSCN-AS1Q96MR7 158 aa12.56□□□□□ -0.4
PPFIA3-202ENST00000421230 SND1-IT1Q9HBX3 110 aa12.56□□□□□ -0.4
PPFIA3-202ENST00000421230 HTN3P15516 51 aa12.56□□□□□ -0.4
PPFIA3-202ENST00000421230 C11orf68Q9H3H3 251 aaKnown RBP12.56□□□□□ -0.4
PPFIA3-202ENST00000421230 SMIM11BQ8TCY0 68 aa12.55□□□□□ -0.4
PPFIA3-202ENST00000421230 TMEM243Q9BU79 118 aa12.55□□□□□ -0.4
PPFIA3-202ENST00000421230 A0A087WYN8 130 aa12.54□□□□□ -0.4
PPFIA3-202ENST00000421230 C9orf129Q5T035 196 aaKnown RBP12.53□□□□□ -0.4
PPFIA3-202ENST00000421230 H0YGX0 51 aa12.53□□□□□ -0.4
PPFIA3-202ENST00000421230 UBE2L6O14933 153 aa12.53□□□□□ -0.4
PPFIA3-202ENST00000421230 ATOX1O00244 68 aa12.52□□□□□ -0.41
PPFIA3-202ENST00000421230 CRYGAP11844 174 aa12.52□□□□□ -0.41
PPFIA3-202ENST00000421230 PRO0255Q9UI72 69 aa12.52□□□□□ -0.41
PPFIA3-202ENST00000421230 DNAL4O96015 105 aa12.52□□□□□ -0.41
PPFIA3-202ENST00000421230 CCL18P55774 89 aa12.51□□□□□ -0.41
PPFIA3-202ENST00000421230 GYPEP15421 78 aa12.5□□□□□ -0.41
PPFIA3-202ENST00000421230 NANOS2P60321 138 aaKnown RBP12.5□□□□□ -0.41
PPFIA3-202ENST00000421230 Q6ZTC4 211 aa12.5□□□□□ -0.41
PPFIA3-202ENST00000421230 KLK5Q9Y337 293 aaPredicted RBP12.5□□□□□ -0.41
PPFIA3-202ENST00000421230 PAX4O43316 350 aa12.5□□□□□ -0.41
PPFIA3-202ENST00000421230 B9D2Q9BPU9 175 aa12.5□□□□□ -0.41
PPFIA3-202ENST00000421230 C14orf132Q9NPU4 83 aa12.5□□□□□ -0.41
PPFIA3-202ENST00000421230 PRKDCP78527 4128 aaKnown RBP12.5□□□□□ -0.41
PPFIA3-202ENST00000421230 LINC00158P58513 81 aa12.49□□□□□ -0.41
PPFIA3-202ENST00000421230 Q6JHZ5 121 aa12.49□□□□□ -0.41
PPFIA3-202ENST00000421230 C11orf45Q8TAV5 145 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms