RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 PDZD11Q5EBL8 140 aa6.69□□□□□ -1.34
RFC1-203ENST00000418436 Q6ZRU5 148 aa6.69□□□□□ -1.34
RFC1-203ENST00000418436 SPACA4Q8TDM5 124 aa6.69□□□□□ -1.34
RFC1-203ENST00000418436 CHCHD1Q96BP2 118 aaKnown RBP6.69□□□□□ -1.34
RFC1-203ENST00000418436 CAMK2N2Q96S95 79 aa6.69□□□□□ -1.34
RFC1-203ENST00000418436 A0A0J9YXV3 536 aa6.68□□□□□ -1.34
RFC1-203ENST00000418436 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.68□□□□□ -1.34
RFC1-203ENST00000418436 CHTF8P0CG12 524 aa6.68□□□□□ -1.34
RFC1-203ENST00000418436 PMVKQ15126 192 aa6.68□□□□□ -1.34
RFC1-203ENST00000418436 PMCHL1Q16048 86 aa6.68□□□□□ -1.34
RFC1-203ENST00000418436 RNF151Q2KHN1 245 aa6.68□□□□□ -1.34
RFC1-203ENST00000418436 PKIGQ9Y2B9 76 aa6.68□□□□□ -1.34
RFC1-203ENST00000418436 IGLV5-45A0A087WSX0 123 aa6.67□□□□□ -1.34
RFC1-203ENST00000418436 A0A096LNI7 61 aa6.67□□□□□ -1.34
RFC1-203ENST00000418436 TINCRA0A1B0GVN0 87 aa6.67□□□□□ -1.34
RFC1-203ENST00000418436 GEMIN7Q9H840 131 aaKnown RBP6.67□□□□□ -1.34
RFC1-203ENST00000418436 MRPL35Q9NZE8 188 aaKnown RBP6.67□□□□□ -1.34
RFC1-203ENST00000418436 CDKN2A-AS1Q9UH64 79 aa6.67□□□□□ -1.34
RFC1-203ENST00000418436 A0A087WYN8 130 aa6.66□□□□□ -1.34
RFC1-203ENST00000418436 SCO1O75880 301 aa6.66□□□□□ -1.34
RFC1-203ENST00000418436 ATP5LO75964 103 aa6.66□□□□□ -1.34
RFC1-203ENST00000418436 PLAC8Q9NZF1 115 aa6.66□□□□□ -1.34
RFC1-203ENST00000418436 IGKV2-24A0A0C4DH68 120 aa6.65□□□□□ -1.34
RFC1-203ENST00000418436 LOC107984640A0A0U1RRK4 108 aa6.65□□□□□ -1.34
RFC1-203ENST00000418436 NDUFA1O15239 70 aa6.65□□□□□ -1.34
RFC1-203ENST00000418436 C10orf25Q5T742 122 aa6.65□□□□□ -1.34
RFC1-203ENST00000418436 UNQ6190/PRO20217Q6UXQ8 127 aa6.65□□□□□ -1.34
RFC1-203ENST00000418436 BAGE3Q86Y29 109 aa6.65□□□□□ -1.34
RFC1-203ENST00000418436 LINC00474Q9P2X8 69 aa6.65□□□□□ -1.34
RFC1-203ENST00000418436 TLX1NBP0CAT3 122 aa6.64□□□□□ -1.35
RFC1-203ENST00000418436 IGLC3P0DOY3 106 aa6.64□□□□□ -1.35
RFC1-203ENST00000418436 PTTG1IPP53801 180 aa6.64□□□□□ -1.35
RFC1-203ENST00000418436 KRTAP10-4P60372 401 aaPredicted RBP6.64□□□□□ -1.35
RFC1-203ENST00000418436 MAJINQ3KP22 176 aa6.64□□□□□ -1.35
RFC1-203ENST00000418436 Q8IZM0 81 aa6.64□□□□□ -1.35
RFC1-203ENST00000418436 LINC00469Q8N7U9 141 aa6.64□□□□□ -1.35
RFC1-203ENST00000418436 DPH3Q96FX2 82 aa6.64□□□□□ -1.35
RFC1-203ENST00000418436 C6orf48Q9UBA6 75 aa6.64□□□□□ -1.35
RFC1-203ENST00000418436 SRRM2Q9UQ35 2752 aaKnown RBP6.63□□□□□ -1.35
RFC1-203ENST00000418436 TRBV30A0A0K0K1B3 111 aa6.63□□□□□ -1.35
RFC1-203ENST00000418436 SMIM1B2RUZ4 78 aa6.63□□□□□ -1.35
RFC1-203ENST00000418436 HSBP1O75506 76 aa6.63□□□□□ -1.35
RFC1-203ENST00000418436 C2orf82Q6UX34 121 aa6.63□□□□□ -1.35
RFC1-203ENST00000418436 PACRGQ96M98 296 aaPredicted RBP6.63□□□□□ -1.35
RFC1-203ENST00000418436 SERF1AO75920 110 aa6.62□□□□□ -1.35
RFC1-203ENST00000418436 INAFM2P0DMQ5 153 aa6.62□□□□□ -1.35
RFC1-203ENST00000418436 NDUFA6P56556 154 aa6.62□□□□□ -1.35
RFC1-203ENST00000418436 GAGE2BQ13066 116 aa6.62□□□□□ -1.35
RFC1-203ENST00000418436 C6orf226Q5I0X4 101 aa6.62□□□□□ -1.35
RFC1-203ENST00000418436 FAM19A2Q8N3H0 131 aa6.62□□□□□ -1.35
RFC1-203ENST00000418436 STPG4Q8N801 248 aa6.62□□□□□ -1.35
RFC1-203ENST00000418436 TOMM7Q9P0U1 55 aa6.62□□□□□ -1.35
RFC1-203ENST00000418436 TRAV12-1A0A0B4J245 112 aa6.61□□□□□ -1.35
RFC1-203ENST00000418436 NUPR1O60356 82 aa6.61□□□□□ -1.35
RFC1-203ENST00000418436 PRSS2P07478 247 aa6.61□□□□□ -1.35
RFC1-203ENST00000418436 IFI27L1Q96BM0 104 aa6.61□□□□□ -1.35
RFC1-203ENST00000418436 H3BRM9 83 aa6.6□□□□□ -1.35
RFC1-203ENST00000418436 SPINK8P0C7L1 97 aa6.6□□□□□ -1.35
RFC1-203ENST00000418436 ZNF22P17026 224 aaPredicted RBP6.6□□□□□ -1.35
RFC1-203ENST00000418436 CKS1BP61024 79 aa6.6□□□□□ -1.35
RFC1-203ENST00000418436 RPL18AQ02543 176 aaKnown RBP6.6□□□□□ -1.35
RFC1-203ENST00000418436 Q6ZRP5 223 aa6.6□□□□□ -1.35
RFC1-203ENST00000418436 IGLV5-39A0A0G2JS06 123 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 A0A1W2PNN7 141 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 C11orf86A6NJI1 115 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 NDUFC2-KCTD14E9PQ53 114 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 F8VRH5 84 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 HIST1H2BKO60814 126 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 HIST1H2BJP06899 126 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 HIST1H2BOP23527 126 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 HIST1H2BBP33778 126 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 CXCL5P42830 114 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 HIST1H2BDP58876 126 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 RPL37AP61513 92 aaKnown RBP6.59□□□□□ -1.35
RFC1-203ENST00000418436 HIST1H2BCP62807 126 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 HIST2H2BEQ16778 126 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.59□□□□□ -1.35
RFC1-203ENST00000418436 COX7B2Q8TF08 81 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 HIST1H2BHQ93079 126 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 HIST1H2BNQ99877 126 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 HIST1H2BMQ99879 126 aa6.59□□□□□ -1.35
RFC1-203ENST00000418436 CHTOPQ9Y3Y2 248 aaKnown RBP6.59□□□□□ -1.35
RFC1-203ENST00000418436 LEPROTL1O95214 131 aa6.58□□□□□ -1.36
RFC1-203ENST00000418436 C21orf62-AS1Q17RA5 79 aa6.58□□□□□ -1.36
RFC1-203ENST00000418436 C9orf116Q5BN46 136 aaPredicted RBP6.58□□□□□ -1.36
RFC1-203ENST00000418436 S100A1P23297 94 aa6.57□□□□□ -1.36
RFC1-203ENST00000418436 C7orf33Q8WU49 177 aa6.57□□□□□ -1.36
RFC1-203ENST00000418436 PKHD1L1Q86WI1 4243 aa6.56□□□□□ -1.36
RFC1-203ENST00000418436 ODF1Q14990 250 aa6.56□□□□□ -1.36
RFC1-203ENST00000418436 GAGE2EQ4V326 116 aa6.56□□□□□ -1.36
RFC1-203ENST00000418436 GAGE2DQ9UEU5 116 aa6.56□□□□□ -1.36
RFC1-203ENST00000418436 C9orf129Q5T035 196 aaKnown RBP6.55□□□□□ -1.36
RFC1-203ENST00000418436 TMEM170BQ5T4T1 132 aa6.55□□□□□ -1.36
RFC1-203ENST00000418436 KRTAP7-1Q8IUC3 87 aa6.55□□□□□ -1.36
RFC1-203ENST00000418436 HSPB8Q9UJY1 196 aa6.55□□□□□ -1.36
RFC1-203ENST00000418436 TMEM223A0PJW6 202 aa6.54□□□□□ -1.36
RFC1-203ENST00000418436 FAM168BA1KXE4 195 aa6.54□□□□□ -1.36
RFC1-203ENST00000418436 ATP6V1G1O75348 118 aa6.54□□□□□ -1.36
RFC1-203ENST00000418436 HNRNPA3P51991 378 aaKnown RBP6.54□□□□□ -1.36
RFC1-203ENST00000418436 COA6Q5JTJ3 125 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms