RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 LINC00575Q6W349 94 aa5.4□□□□□ -1.54
VRK2-203ENST00000417641 C6orf223Q8N319 242 aa5.4□□□□□ -1.54
VRK2-203ENST00000417641 LINC00482Q8N8I6 264 aa5.4□□□□□ -1.54
VRK2-203ENST00000417641 SERP1Q9Y6X1 66 aa5.4□□□□□ -1.54
VRK2-203ENST00000417641 KLKP1Q107X0 134 aa5.4□□□□□ -1.55
VRK2-203ENST00000417641 MAPK1IP1LQ8NDC0 245 aa5.4□□□□□ -1.55
VRK2-203ENST00000417641 C11orf68Q9H3H3 251 aaKnown RBP5.4□□□□□ -1.55
VRK2-203ENST00000417641 TRGV4A0A0C4DH28 118 aa5.39□□□□□ -1.55
VRK2-203ENST00000417641 A0A1B0GUV1 79 aa5.39□□□□□ -1.55
VRK2-203ENST00000417641 C19orf73Q9NVV2 129 aa5.39□□□□□ -1.55
VRK2-203ENST00000417641 CREBBPQ92793 2442 aa5.39□□□□□ -1.55
VRK2-203ENST00000417641 IGHV4-28A0A0C4DH34 117 aa5.38□□□□□ -1.55
VRK2-203ENST00000417641 IGHV4-31P0DP07 118 aa5.38□□□□□ -1.55
VRK2-203ENST00000417641 TRAV10A0A0B4J240 114 aa5.38□□□□□ -1.55
VRK2-203ENST00000417641 LINC01547P58512 204 aaPredicted RBP5.38□□□□□ -1.55
VRK2-203ENST00000417641 COX17Q14061 63 aa5.38□□□□□ -1.55
VRK2-203ENST00000417641 C6orf99Q4VX62 202 aa5.38□□□□□ -1.55
VRK2-203ENST00000417641 ZNF561-AS1K7EIQ3 104 aa5.37□□□□□ -1.55
VRK2-203ENST00000417641 RBM3P98179 157 aaKnown RBP5.37□□□□□ -1.55
VRK2-203ENST00000417641 KHDC1LQ5JSQ8 128 aa5.37□□□□□ -1.55
VRK2-203ENST00000417641 C16orf95Q9H693 158 aa5.37□□□□□ -1.55
VRK2-203ENST00000417641 MUC6Q6W4X9 2439 aa5.37□□□□□ -1.55
VRK2-203ENST00000417641 C9orf66Q5T8R8 295 aa5.37□□□□□ -1.55
VRK2-203ENST00000417641 Q6ZVQ6 151 aa5.37□□□□□ -1.55
VRK2-203ENST00000417641 LINC00612Q8N6U2 182 aa5.37□□□□□ -1.55
VRK2-203ENST00000417641 MRAPQ8TCY5 172 aa5.37□□□□□ -1.55
VRK2-203ENST00000417641 SPATA3Q8NHX4 192 aa5.36□□□□□ -1.55
VRK2-203ENST00000417641 IGF2RP11717 2491 aa5.36□□□□□ -1.55
VRK2-203ENST00000417641 WFDC10AQ9H1F0 79 aa5.36□□□□□ -1.55
VRK2-203ENST00000417641 CRYBG3Q68DQ2 2970 aa5.35□□□□□ -1.55
VRK2-203ENST00000417641 CMC4P56277 68 aaPredicted RBP5.35□□□□□ -1.55
VRK2-203ENST00000417641 CXCL6P80162 114 aa5.35□□□□□ -1.55
VRK2-203ENST00000417641 FP248Q71RG6 208 aaPredicted RBP5.35□□□□□ -1.55
VRK2-203ENST00000417641 CCL24O00175 119 aa5.35□□□□□ -1.55
VRK2-203ENST00000417641 CD164L2Q6UWJ8 174 aa5.35□□□□□ -1.55
VRK2-203ENST00000417641 LINC00336Q6ZUF6 198 aa5.35□□□□□ -1.55
VRK2-203ENST00000417641 RMI2Q96E14 147 aa5.35□□□□□ -1.55
VRK2-203ENST00000417641 IGLV6-57P01721 117 aa5.34□□□□□ -1.55
VRK2-203ENST00000417641 RPL35AP18077 110 aaKnown RBP5.34□□□□□ -1.55
VRK2-203ENST00000417641 C9orf116Q5BN46 136 aaPredicted RBP5.34□□□□□ -1.55
VRK2-203ENST00000417641 SMIM26A0A096LP01 95 aa5.33□□□□□ -1.56
VRK2-203ENST00000417641 TRBV7-4A0A0J9YYF1 115 aa5.33□□□□□ -1.56
VRK2-203ENST00000417641 RNASE1P07998 156 aaKnown RBP5.33□□□□□ -1.56
VRK2-203ENST00000417641 GYPEP15421 78 aa5.33□□□□□ -1.56
VRK2-203ENST00000417641 PDE6GP18545 87 aa5.33□□□□□ -1.56
VRK2-203ENST00000417641 CLPSL2Q6UWE3 100 aa5.33□□□□□ -1.56
VRK2-203ENST00000417641 ZNF843Q8N446 348 aa5.33□□□□□ -1.56
VRK2-203ENST00000417641 PRO0628Q9UI54 55 aa5.33□□□□□ -1.56
VRK2-203ENST00000417641 SNURFQ9Y675 71 aa5.33□□□□□ -1.56
VRK2-203ENST00000417641 C2CD3Q4AC94 2353 aa5.32□□□□□ -1.56
VRK2-203ENST00000417641 F8WEM9 126 aa5.32□□□□□ -1.56
VRK2-203ENST00000417641 H3BQ85 93 aa5.32□□□□□ -1.56
VRK2-203ENST00000417641 IGLV1-51P01701 117 aa5.32□□□□□ -1.56
VRK2-203ENST00000417641 HAMPP81172 84 aa5.32□□□□□ -1.56
VRK2-203ENST00000417641 LINC00269Q8N2A0 174 aa5.32□□□□□ -1.56
VRK2-203ENST00000417641 MUC7Q8TAX7 377 aa5.32□□□□□ -1.56
VRK2-203ENST00000417641 CHCHD10Q8WYQ3 142 aaPredicted RBP5.32□□□□□ -1.56
VRK2-203ENST00000417641 LAMTOR3Q9UHA4 124 aa5.32□□□□□ -1.56
VRK2-203ENST00000417641 CR1P17927 2039 aa5.32□□□□□ -1.56
VRK2-203ENST00000417641 C10orf25Q5T742 122 aa5.31□□□□□ -1.56
VRK2-203ENST00000417641 Q8N3U1 123 aa5.31□□□□□ -1.56
VRK2-203ENST00000417641 TM2D3Q9BRN9 247 aa5.31□□□□□ -1.56
VRK2-203ENST00000417641 A0A0J9YWU9 116 aa5.31□□□□□ -1.56
VRK2-203ENST00000417641 IGHV4-30-4P0DP06 118 aa5.31□□□□□ -1.56
VRK2-203ENST00000417641 Q6ZQY7 126 aa5.31□□□□□ -1.56
VRK2-203ENST00000417641 LINC01006Q8NI28 216 aa5.31□□□□□ -1.56
VRK2-203ENST00000417641 SPG11Q96JI7 2443 aa5.31□□□□□ -1.56
VRK2-203ENST00000417641 AKAP9Q99996 3911 aa5.3□□□□□ -1.56
VRK2-203ENST00000417641 NDUFC1O43677 76 aa5.3□□□□□ -1.56
VRK2-203ENST00000417641 NOTCH3Q9UM47 2321 aa5.3□□□□□ -1.56
VRK2-203ENST00000417641 CELSR2Q9HCU4 2923 aa5.3□□□□□ -1.56
VRK2-203ENST00000417641 TRBV7-6A0A0J9YX20 115 aa5.3□□□□□ -1.56
VRK2-203ENST00000417641 DEFB130BP0DP73 79 aa5.3□□□□□ -1.56
VRK2-203ENST00000417641 DEFB130AP0DP74 79 aa5.3□□□□□ -1.56
VRK2-203ENST00000417641 UNQ6190/PRO20217Q6UXQ8 127 aa5.29□□□□□ -1.56
VRK2-203ENST00000417641 BBC3Q96PG8 261 aaPredicted RBP5.29□□□□□ -1.56
VRK2-203ENST00000417641 PRO0255Q9UI72 69 aa5.29□□□□□ -1.56
VRK2-203ENST00000417641 NBPF19A0A087WUL8 3843 aa5.29□□□□□ -1.56
VRK2-203ENST00000417641 ERC2-IT1O76042 136 aa5.29□□□□□ -1.56
VRK2-203ENST00000417641 REG3AQ06141 175 aa5.29□□□□□ -1.56
VRK2-203ENST00000417641 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.29□□□□□ -1.56
VRK2-203ENST00000417641 LINC00474Q9P2X8 69 aa5.29□□□□□ -1.56
VRK2-203ENST00000417641 X6R8D5 127 aa5.29□□□□□ -1.56
VRK2-203ENST00000417641 ATP5EP56381 51 aaPredicted RBP5.28□□□□□ -1.56
VRK2-203ENST00000417641 CSMD2Q7Z408 3487 aa5.28□□□□□ -1.56
VRK2-203ENST00000417641 IGLV10-54A0A075B6I4 117 aa5.28□□□□□ -1.56
VRK2-203ENST00000417641 A0A096LPF7 62 aa5.28□□□□□ -1.56
VRK2-203ENST00000417641 GVQW2A0A096LPI5 108 aaPredicted RBP5.28□□□□□ -1.56
VRK2-203ENST00000417641 MIFP14174 115 aa5.28□□□□□ -1.56
VRK2-203ENST00000417641 DNAJC9-AS1A6NH13 148 aa5.27□□□□□ -1.57
VRK2-203ENST00000417641 SCXQ7RTU7 201 aa5.27□□□□□ -1.57
VRK2-203ENST00000417641 ESM1Q9NQ30 184 aa5.27□□□□□ -1.57
VRK2-203ENST00000417641 PIEZO1Q92508 2521 aa5.27□□□□□ -1.57
VRK2-203ENST00000417641 CYSRT1A8MQ03 144 aa5.27□□□□□ -1.57
VRK2-203ENST00000417641 SPAG11BQ08648 103 aa5.27□□□□□ -1.57
VRK2-203ENST00000417641 NREPQ16612 68 aa5.27□□□□□ -1.57
VRK2-203ENST00000417641 CELA1Q9UNI1 258 aa5.27□□□□□ -1.57
VRK2-203ENST00000417641 ELOF1P60002 83 aaKnown RBP5.26□□□□□ -1.57
VRK2-203ENST00000417641 KRTAP10-9P60411 292 aa5.26□□□□□ -1.57
VRK2-203ENST00000417641 KRTAP1-3Q8IUG1 177 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms