RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SPACA4Q8TDM5 124 aa14.74□□□□□ -0.05
SMARCB1-205ENST00000417137 HSPB8Q9UJY1 196 aa14.74□□□□□ -0.05
SMARCB1-205ENST00000417137 IGKV2-24A0A0C4DH68 120 aa14.73□□□□□ -0.05
SMARCB1-205ENST00000417137 SMIM1B2RUZ4 78 aa14.73□□□□□ -0.05
SMARCB1-205ENST00000417137 PANO1I0J062 215 aa14.73□□□□□ -0.05
SMARCB1-205ENST00000417137 NUPR1O60356 82 aa14.73□□□□□ -0.05
SMARCB1-205ENST00000417137 CHTF8P0CG12 524 aa14.73□□□□□ -0.05
SMARCB1-205ENST00000417137 HSPG2P98160 4391 aa14.72□□□□□ -0.05
SMARCB1-205ENST00000417137 TRBV30A0A0K0K1B3 111 aa14.72□□□□□ -0.05
SMARCB1-205ENST00000417137 EPM2AB3EWF7 344 aa14.72□□□□□ -0.05
SMARCB1-205ENST00000417137 MAJINQ3KP22 176 aa14.72□□□□□ -0.05
SMARCB1-205ENST00000417137 A0A096LNI7 61 aa14.71□□□□□ -0.05
SMARCB1-205ENST00000417137 C10orf25Q5T742 122 aa14.71□□□□□ -0.05
SMARCB1-205ENST00000417137 SPINK8P0C7L1 97 aa14.7□□□□□ -0.06
SMARCB1-205ENST00000417137 CXCL5P42830 114 aa14.7□□□□□ -0.06
SMARCB1-205ENST00000417137 GAGE2BQ13066 116 aa14.7□□□□□ -0.06
SMARCB1-205ENST00000417137 C2orf82Q6UX34 121 aa14.7□□□□□ -0.06
SMARCB1-205ENST00000417137 DNAH8Q96JB1 4490 aa14.7□□□□□ -0.06
SMARCB1-205ENST00000417137 A0A087WYN8 130 aa14.69□□□□□ -0.06
SMARCB1-205ENST00000417137 FABP4P15090 132 aa14.69□□□□□ -0.06
SMARCB1-205ENST00000417137 ZNF22P17026 224 aaPredicted RBP14.69□□□□□ -0.06
SMARCB1-205ENST00000417137 PTTG1IPP53801 180 aa14.69□□□□□ -0.06
SMARCB1-205ENST00000417137 COX7B2Q8TF08 81 aa14.69□□□□□ -0.06
SMARCB1-205ENST00000417137 C6orf48Q9UBA6 75 aa14.69□□□□□ -0.06
SMARCB1-205ENST00000417137 C11orf86A6NJI1 115 aa14.68□□□□□ -0.06
SMARCB1-205ENST00000417137 RPL18AQ02543 176 aaKnown RBP14.68□□□□□ -0.06
SMARCB1-205ENST00000417137 TMEM170BQ5T4T1 132 aa14.68□□□□□ -0.06
SMARCB1-205ENST00000417137 F8VRH5 84 aa14.67□□□□□ -0.06
SMARCB1-205ENST00000417137 Q5VSD8 79 aa14.67□□□□□ -0.06
SMARCB1-205ENST00000417137 LINC00528Q8N1L1 170 aa14.67□□□□□ -0.06
SMARCB1-205ENST00000417137 PLAC8Q9NZF1 115 aa14.67□□□□□ -0.06
SMARCB1-205ENST00000417137 H0Y8G0 127 aa14.66□□□□□ -0.06
SMARCB1-205ENST00000417137 TLX1NBP0CAT3 122 aa14.66□□□□□ -0.06
SMARCB1-205ENST00000417137 STPG4Q8N801 248 aa14.66□□□□□ -0.06
SMARCB1-205ENST00000417137 PLA2G1BP04054 148 aaKnown RBP14.64□□□□□ -0.07
SMARCB1-205ENST00000417137 IGLV5-39A0A0G2JS06 123 aa14.63□□□□□ -0.07
SMARCB1-205ENST00000417137 MAP1LC3CQ9BXW4 147 aa14.63□□□□□ -0.07
SMARCB1-205ENST00000417137 COA6Q5JTJ3 125 aaKnown RBP14.62□□□□□ -0.07
SMARCB1-205ENST00000417137 NDUFC2-KCTD14E9PQ53 114 aa14.61□□□□□ -0.07
SMARCB1-205ENST00000417137 ODF1Q14990 250 aa14.61□□□□□ -0.07
SMARCB1-205ENST00000417137 Q6ZRP5 223 aa14.61□□□□□ -0.07
SMARCB1-205ENST00000417137 GAGE2EQ4V326 116 aa14.59□□□□□ -0.07
SMARCB1-205ENST00000417137 C9orf116Q5BN46 136 aaPredicted RBP14.59□□□□□ -0.07
SMARCB1-205ENST00000417137 GAGE2DQ9UEU5 116 aa14.59□□□□□ -0.07
SMARCB1-205ENST00000417137 PLNP26678 52 aa14.58□□□□□ -0.08
SMARCB1-205ENST00000417137 TMEM223A0PJW6 202 aa14.57□□□□□ -0.08
SMARCB1-205ENST00000417137 SFTA2Q6UW10 78 aa14.57□□□□□ -0.08
SMARCB1-205ENST00000417137 C7orf33Q8WU49 177 aa14.57□□□□□ -0.08
SMARCB1-205ENST00000417137 DPM2O94777 84 aa14.55□□□□□ -0.08
SMARCB1-205ENST00000417137 RPL37AP61513 92 aaKnown RBP14.54□□□□□ -0.08
SMARCB1-205ENST00000417137 A0A1W2PNN7 141 aa14.52□□□□□ -0.09
SMARCB1-205ENST00000417137 SYS1-DBNDD2H3BUS1 97 aa14.52□□□□□ -0.09
SMARCB1-205ENST00000417137 IGKCP01834 107 aa14.52□□□□□ -0.09
SMARCB1-205ENST00000417137 INAFM2P0DMQ5 153 aa14.5□□□□□ -0.09
SMARCB1-205ENST00000417137 PMCHL2Q9BQD1 86 aa14.5□□□□□ -0.09
SMARCB1-205ENST00000417137 HERVK_113P61574 105 aa14.49□□□□□ -0.09
SMARCB1-205ENST00000417137 PET117Q6UWS5 81 aa14.49□□□□□ -0.09
SMARCB1-205ENST00000417137 C9orf129Q5T035 196 aaKnown RBP14.47□□□□□ -0.09
SMARCB1-205ENST00000417137 FAT1Q14517 4588 aa14.46□□□□□ -0.09
SMARCB1-205ENST00000417137 COX17Q14061 63 aa14.46□□□□□ -0.09
SMARCB1-205ENST00000417137 ZNF625Q96I27 306 aaPredicted RBP14.46□□□□□ -0.09
SMARCB1-205ENST00000417137 FAM168BA1KXE4 195 aa14.45□□□□□ -0.1
SMARCB1-205ENST00000417137 S100A6P06703 90 aa14.45□□□□□ -0.1
SMARCB1-205ENST00000417137 PFN2P35080 140 aa14.45□□□□□ -0.1
SMARCB1-205ENST00000417137 FAM19A5Q7Z5A7 132 aaPredicted RBP14.45□□□□□ -0.1
SMARCB1-205ENST00000417137 PLEKHB2Q96CS7 222 aa14.45□□□□□ -0.1
SMARCB1-205ENST00000417137 XAGE1AQ9HD64 81 aa14.45□□□□□ -0.1
SMARCB1-205ENST00000417137 ERG28Q9UKR5 140 aa14.45□□□□□ -0.1
SMARCB1-205ENST00000417137 LEPROTO15243 131 aa14.44□□□□□ -0.1
SMARCB1-205ENST00000417137 C3orf79P0CE67 100 aa14.44□□□□□ -0.1
SMARCB1-205ENST00000417137 KRTDAPP60985 99 aa14.44□□□□□ -0.1
SMARCB1-205ENST00000417137 LINC01545Q5VT33 79 aa14.44□□□□□ -0.1
SMARCB1-205ENST00000417137 HERC1Q15751 4861 aa14.43□□□□□ -0.1
SMARCB1-205ENST00000417137 KRTAP10-4P60372 401 aaPredicted RBP14.43□□□□□ -0.1
SMARCB1-205ENST00000417137 HERV-K104P63124 156 aa14.43□□□□□ -0.1
SMARCB1-205ENST00000417137 MYMXA0A1B0GTQ4 84 aa14.41□□□□□ -0.1
SMARCB1-205ENST00000417137 S100A2P29034 98 aa14.41□□□□□ -0.1
SMARCB1-205ENST00000417137 PHF5AQ7RTV0 110 aaKnown RBP14.41□□□□□ -0.1
SMARCB1-205ENST00000417137 NDUFA12Q9UI09 145 aa14.41□□□□□ -0.1
SMARCB1-205ENST00000417137 C20orf202A1L168 122 aa14.4□□□□□ -0.1
SMARCB1-205ENST00000417137 LINC00587B1AMM8 73 aa14.4□□□□□ -0.1
SMARCB1-205ENST00000417137 M0QXV9 152 aa14.39□□□□□ -0.11
SMARCB1-205ENST00000417137 J3QQQ9 107 aa14.38□□□□□ -0.11
SMARCB1-205ENST00000417137 LGALS3P17931 250 aaKnown RBP14.38□□□□□ -0.11
SMARCB1-205ENST00000417137 LINC00158P58513 81 aa14.38□□□□□ -0.11
SMARCB1-205ENST00000417137 VPS13BQ7Z7G8 4022 aa14.38□□□□□ -0.11
SMARCB1-205ENST00000417137 NMUP48645 174 aa14.37□□□□□ -0.11
SMARCB1-205ENST00000417137 AKR1D1P51857 326 aa14.37□□□□□ -0.11
SMARCB1-205ENST00000417137 PRR3P79522 188 aaKnown RBP14.37□□□□□ -0.11
SMARCB1-205ENST00000417137 KRTAP7-1Q8IUC3 87 aa14.37□□□□□ -0.11
SMARCB1-205ENST00000417137 HIST3H2BBQ8N257 126 aa14.37□□□□□ -0.11
SMARCB1-205ENST00000417137 DMBT1Q9UGM3 2413 aaPredicted RBP14.37□□□□□ -0.11
SMARCB1-205ENST00000417137 LBHQ53QV2 105 aaPredicted RBP14.36□□□□□ -0.11
SMARCB1-205ENST00000417137 MEIG1Q5JSS6 88 aa14.36□□□□□ -0.11
SMARCB1-205ENST00000417137 PLA2G2DQ9UNK4 145 aa14.36□□□□□ -0.11
SMARCB1-205ENST00000417137 E9PLD3 99 aa14.35□□□□□ -0.11
SMARCB1-205ENST00000417137 SERTAD4-AS1Q5TG53 156 aa14.35□□□□□ -0.11
SMARCB1-205ENST00000417137 SND1-IT1Q9HBX3 110 aa14.35□□□□□ -0.11
SMARCB1-205ENST00000417137 C22orf24Q9Y442 160 aa14.35□□□□□ -0.11
SMARCB1-205ENST00000417137 TSPEAR-AS2P59090 65 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms