RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 TEX49A0A1B0GTD5 131 aa10.06□□□□□ -0.8
SGCE-202ENST00000415788 RPL36AP83881 106 aaKnown RBP10.06□□□□□ -0.8
SGCE-202ENST00000415788 RPL36ALQ969Q0 106 aaKnown RBP10.06□□□□□ -0.8
SGCE-202ENST00000415788 IGHV3-64A0A075B6Q5 118 aa10.05□□□□□ -0.8
SGCE-202ENST00000415788 A0A096LPF7 62 aa10.05□□□□□ -0.8
SGCE-202ENST00000415788 TIMM17BO60830 172 aa10.05□□□□□ -0.8
SGCE-202ENST00000415788 MIAQ16674 131 aa10.05□□□□□ -0.8
SGCE-202ENST00000415788 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
SGCE-202ENST00000415788 LOC100131303A0A0U1RQF7 123 aa10.04□□□□□ -0.8
SGCE-202ENST00000415788 H7C423 109 aa10.04□□□□□ -0.8
SGCE-202ENST00000415788 TINCRA0A1B0GVN0 87 aa10.03□□□□□ -0.8
SGCE-202ENST00000415788 LST1O00453 97 aa10.03□□□□□ -0.8
SGCE-202ENST00000415788 LINC00694P0DN24 101 aa10.03□□□□□ -0.8
SGCE-202ENST00000415788 NDUFA12Q9UI09 145 aa10.03□□□□□ -0.8
SGCE-202ENST00000415788 PRSS2P07478 247 aa10.02□□□□□ -0.8
SGCE-202ENST00000415788 TNFRSF18Q9Y5U5 241 aa10.02□□□□□ -0.8
SGCE-202ENST00000415788 Q9UF83 564 aa10.02□□□□□ -0.81
SGCE-202ENST00000415788 CCL18P55774 89 aa10.01□□□□□ -0.81
SGCE-202ENST00000415788 CCDC179H3BU77 68 aa10□□□□□ -0.81
SGCE-202ENST00000415788 ACYP1P07311 99 aa10□□□□□ -0.81
SGCE-202ENST00000415788 TIRAPP58753 221 aa10□□□□□ -0.81
SGCE-202ENST00000415788 DAZ4Q86SG3 579 aaKnown RBP10□□□□□ -0.81
SGCE-202ENST00000415788 DAZ3Q9NR90 486 aaKnown RBP10□□□□□ -0.81
SGCE-202ENST00000415788 TRBV7-7A0A0K0K1E9 115 aa10□□□□□ -0.81
SGCE-202ENST00000415788 ADAMTSL4-AS1Q5T5F5 129 aa9.99□□□□□ -0.81
SGCE-202ENST00000415788 FAM104AQ969W3 186 aa9.99□□□□□ -0.81
SGCE-202ENST00000415788 DNAH7Q8WXX0 4024 aa9.98□□□□□ -0.81
SGCE-202ENST00000415788 TRAV8-3A0A0A6YYJ7 113 aa9.98□□□□□ -0.81
SGCE-202ENST00000415788 LYPD5Q6UWN5 251 aa9.98□□□□□ -0.81
SGCE-202ENST00000415788 IMUPQ9GZP8 106 aa9.98□□□□□ -0.81
SGCE-202ENST00000415788 ESRGQ1W209 222 aa9.98□□□□□ -0.81
SGCE-202ENST00000415788 UBE2DNLQ8IWF7 75 aa9.97□□□□□ -0.81
SGCE-202ENST00000415788 COPS9Q8WXC6 57 aa9.97□□□□□ -0.81
SGCE-202ENST00000415788 NDUFA1O15239 70 aa9.96□□□□□ -0.81
SGCE-202ENST00000415788 CIRBPQ14011 172 aaKnown RBP9.96□□□□□ -0.81
SGCE-202ENST00000415788 TMEM101Q96IK0 257 aa9.96□□□□□ -0.81
SGCE-202ENST00000415788 LELP1Q5T871 98 aa9.96□□□□□ -0.82
SGCE-202ENST00000415788 CLEC2BQ92478 149 aa9.96□□□□□ -0.82
SGCE-202ENST00000415788 UPK3BQ9BT76 320 aa9.96□□□□□ -0.82
SGCE-202ENST00000415788 UBE2D4Q9Y2X8 147 aa9.96□□□□□ -0.82
SGCE-202ENST00000415788 LINC00588Q9Y4M8 146 aa9.96□□□□□ -0.82
SGCE-202ENST00000415788 TMEM126AQ9H061 195 aa9.95□□□□□ -0.82
SGCE-202ENST00000415788 IGLV5-45A0A087WSX0 123 aa9.94□□□□□ -0.82
SGCE-202ENST00000415788 IGHV3-38A0A0C4DH36 116 aa9.94□□□□□ -0.82
SGCE-202ENST00000415788 LINC00476Q8WZB0 136 aa9.94□□□□□ -0.82
SGCE-202ENST00000415788 CHCHD7Q9BUK0 85 aa9.94□□□□□ -0.82
SGCE-202ENST00000415788 TRBV6-8A0A0A6YYG3 113 aa9.93□□□□□ -0.82
SGCE-202ENST00000415788 MEIG1Q5JSS6 88 aa9.93□□□□□ -0.82
SGCE-202ENST00000415788 LY6G6CO95867 125 aa9.92□□□□□ -0.82
SGCE-202ENST00000415788 PPDPFQ9H3Y8 114 aa9.92□□□□□ -0.82
SGCE-202ENST00000415788 CSMD3Q7Z407 3707 aa9.92□□□□□ -0.82
SGCE-202ENST00000415788 DYNC2H1Q8NCM8 4307 aaKnown RBP9.92□□□□□ -0.82
SGCE-202ENST00000415788 COX7A2LO14548 114 aa9.91□□□□□ -0.82
SGCE-202ENST00000415788 STARD9Q9P2P6 4700 aa9.91□□□□□ -0.82
SGCE-202ENST00000415788 NPC2P61916 151 aa9.9□□□□□ -0.82
SGCE-202ENST00000415788 LCE6AA0A183 80 aa9.89□□□□□ -0.83
SGCE-202ENST00000415788 TRACP01848 142 aa9.89□□□□□ -0.83
SGCE-202ENST00000415788 NTM-AS1Q6ZSK4 140 aa9.89□□□□□ -0.83
SGCE-202ENST00000415788 LINC00643Q86TS7 51 aa9.89□□□□□ -0.83
SGCE-202ENST00000415788 LINC00308Q8TCZ7 52 aa9.89□□□□□ -0.83
SGCE-202ENST00000415788 HERVK_113P63121 156 aa9.89□□□□□ -0.83
SGCE-202ENST00000415788 RNASE13Q5GAN3 156 aaKnown RBP9.89□□□□□ -0.83
SGCE-202ENST00000415788 FAM19A3Q7Z5A8 133 aa9.89□□□□□ -0.83
SGCE-202ENST00000415788 SMIM20Q8N5G0 67 aa9.89□□□□□ -0.83
SGCE-202ENST00000415788 Q9H8V8 135 aa9.89□□□□□ -0.83
SGCE-202ENST00000415788 IGLV5-39A0A0G2JS06 123 aa9.88□□□□□ -0.83
SGCE-202ENST00000415788 TMEM243Q9BU79 118 aa9.88□□□□□ -0.83
SGCE-202ENST00000415788 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
SGCE-202ENST00000415788 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.87□□□□□ -0.83
SGCE-202ENST00000415788 IGKV2-29A2NJV5 120 aaPredicted RBP9.87□□□□□ -0.83
SGCE-202ENST00000415788 WFDC10BQ8IUB3 73 aa9.87□□□□□ -0.83
SGCE-202ENST00000415788 CHCHD5Q9BSY4 110 aa9.87□□□□□ -0.83
SGCE-202ENST00000415788 DNAH10OSP0CZ25 163 aa9.87□□□□□ -0.83
SGCE-202ENST00000415788 CXCL5P42830 114 aa9.86□□□□□ -0.83
SGCE-202ENST00000415788 LINC01556Q5JQF7 62 aa9.86□□□□□ -0.83
SGCE-202ENST00000415788 SDIM1Q6ZPB5 146 aa9.86□□□□□ -0.83
SGCE-202ENST00000415788 HERV-K104P63124 156 aa9.85□□□□□ -0.83
SGCE-202ENST00000415788 DGAT2L7PQ6IED9 249 aa9.85□□□□□ -0.83
SGCE-202ENST00000415788 UBE2L6O14933 153 aa9.85□□□□□ -0.83
SGCE-202ENST00000415788 INAFM2P0DMQ5 153 aa9.85□□□□□ -0.83
SGCE-202ENST00000415788 DAND5Q8N907 189 aa9.85□□□□□ -0.83
SGCE-202ENST00000415788 FAM236AA0A1B0GUQ0 79 aa9.84□□□□□ -0.83
SGCE-202ENST00000415788 FAM236BA0A1B0GV22 79 aa9.84□□□□□ -0.83
SGCE-202ENST00000415788 CSDC2Q9Y534 153 aaKnown RBP9.83□□□□□ -0.84
SGCE-202ENST00000415788 C3orf22Q8N5N4 141 aa9.83□□□□□ -0.84
SGCE-202ENST00000415788 PLECQ15149 4684 aaKnown RBP9.82□□□□□ -0.84
SGCE-202ENST00000415788 NBDYA0A0U1RRE5 68 aa9.82□□□□□ -0.84
SGCE-202ENST00000415788 UQCRQO14949 82 aa9.82□□□□□ -0.84
SGCE-202ENST00000415788 A0A1B0GUV1 79 aa9.81□□□□□ -0.84
SGCE-202ENST00000415788 BAALC-AS2P0C853 105 aa9.81□□□□□ -0.84
SGCE-202ENST00000415788 LINC00242Q5T6M2 205 aa9.81□□□□□ -0.84
SGCE-202ENST00000415788 TENM2Q9NT68 2774 aa9.81□□□□□ -0.84
SGCE-202ENST00000415788 COX6A2Q02221 97 aa9.81□□□□□ -0.84
SGCE-202ENST00000415788 CFAP161Q6P656 301 aa9.81□□□□□ -0.84
SGCE-202ENST00000415788 SMIM1B2RUZ4 78 aa9.8□□□□□ -0.84
SGCE-202ENST00000415788 C5orf38Q86SI9 138 aa9.8□□□□□ -0.84
SGCE-202ENST00000415788 SMCR5Q8TEV8 140 aa9.8□□□□□ -0.84
SGCE-202ENST00000415788 ZNF625Q96I27 306 aaPredicted RBP9.8□□□□□ -0.84
SGCE-202ENST00000415788 TRAV13-2A0A0B4J235 113 aa9.79□□□□□ -0.84
SGCE-202ENST00000415788 SOSTDC1Q6X4U4 206 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms