RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 GAGE10A6NGK3 116 aa11.4□□□□□ -0.58
UBXN4-202ENST00000415164 RPL37AP8A6NKH3 93 aa11.4□□□□□ -0.58
UBXN4-202ENST00000415164 BCE1O60756 84 aa11.4□□□□□ -0.58
UBXN4-202ENST00000415164 ORMDL2Q53FV1 153 aa11.4□□□□□ -0.58
UBXN4-202ENST00000415164 GEMIN7Q9H840 131 aaKnown RBP11.4□□□□□ -0.58
UBXN4-202ENST00000415164 ANAPC11Q9NYG5 84 aa11.4□□□□□ -0.58
UBXN4-202ENST00000415164 CDKN2A-AS1Q9UH64 79 aa11.4□□□□□ -0.58
UBXN4-202ENST00000415164 LAMTOR2Q9Y2Q5 125 aa11.4□□□□□ -0.58
UBXN4-202ENST00000415164 F8VRH5 84 aa11.39□□□□□ -0.59
UBXN4-202ENST00000415164 HERVK_113P63121 156 aa11.39□□□□□ -0.59
UBXN4-202ENST00000415164 PRSS47A8MTI9 375 aa11.38□□□□□ -0.59
UBXN4-202ENST00000415164 RETNLBQ9BQ08 111 aa11.37□□□□□ -0.59
UBXN4-202ENST00000415164 KRTAP9-2Q9BYQ4 174 aa11.37□□□□□ -0.59
UBXN4-202ENST00000415164 TP73-AS1Q9UF72 201 aa11.37□□□□□ -0.59
UBXN4-202ENST00000415164 SEC11AP67812 179 aa11.36□□□□□ -0.59
UBXN4-202ENST00000415164 LINC00167Q96N53 147 aa11.36□□□□□ -0.59
UBXN4-202ENST00000415164 IGIPA6NJ69 53 aa11.35□□□□□ -0.59
UBXN4-202ENST00000415164 UBE2AP49459 152 aa11.35□□□□□ -0.59
UBXN4-202ENST00000415164 PAPPA-AS1Q5QFB9 102 aa11.35□□□□□ -0.59
UBXN4-202ENST00000415164 FAT4Q6V0I7 4981 aa11.34□□□□□ -0.59
UBXN4-202ENST00000415164 RAB5BP61020 215 aa11.34□□□□□ -0.59
UBXN4-202ENST00000415164 FAM19A3Q7Z5A8 133 aa11.34□□□□□ -0.59
UBXN4-202ENST00000415164 NPSP0C0P6 89 aa11.33□□□□□ -0.6
UBXN4-202ENST00000415164 CXCL5P42830 114 aa11.33□□□□□ -0.6
UBXN4-202ENST00000415164 NXT2Q9NPJ8 142 aaKnown RBP11.32□□□□□ -0.6
UBXN4-202ENST00000415164 NKAPP1Q8N9T2 125 aa11.31□□□□□ -0.6
UBXN4-202ENST00000415164 COX7B2Q8TF08 81 aa11.31□□□□□ -0.6
UBXN4-202ENST00000415164 K7EMI3 77 aa11.3□□□□□ -0.6
UBXN4-202ENST00000415164 SMIM1B2RUZ4 78 aa11.29□□□□□ -0.6
UBXN4-202ENST00000415164 MT-ND4LP03901 98 aa11.29□□□□□ -0.6
UBXN4-202ENST00000415164 KRTAP13-2Q52LG2 175 aa11.29□□□□□ -0.6
UBXN4-202ENST00000415164 SCGB3A1Q96QR1 104 aa11.29□□□□□ -0.6
UBXN4-202ENST00000415164 TIMM17AQ99595 171 aa11.29□□□□□ -0.6
UBXN4-202ENST00000415164 IGKV2-28A0A075B6P5 120 aa11.28□□□□□ -0.6
UBXN4-202ENST00000415164 IGKV2D-28P01615 120 aa11.28□□□□□ -0.6
UBXN4-202ENST00000415164 G0S2P27469 103 aa11.28□□□□□ -0.6
UBXN4-202ENST00000415164 PNRC1Q12796 327 aaPredicted RBP11.28□□□□□ -0.6
UBXN4-202ENST00000415164 LINC00304Q8N9R0 145 aa11.28□□□□□ -0.6
UBXN4-202ENST00000415164 TOMM6Q96B49 74 aa11.28□□□□□ -0.6
UBXN4-202ENST00000415164 ANAPC16Q96DE5 110 aa11.28□□□□□ -0.6
UBXN4-202ENST00000415164 CDIP1Q9H305 208 aa11.28□□□□□ -0.6
UBXN4-202ENST00000415164 MUC17Q685J3 4493 aa11.28□□□□□ -0.6
UBXN4-202ENST00000415164 A0A1B0GVG6 124 aa11.27□□□□□ -0.61
UBXN4-202ENST00000415164 SCO1O75880 301 aa11.27□□□□□ -0.61
UBXN4-202ENST00000415164 SPINK8P0C7L1 97 aa11.27□□□□□ -0.61
UBXN4-202ENST00000415164 PDZD11Q5EBL8 140 aa11.27□□□□□ -0.61
UBXN4-202ENST00000415164 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
UBXN4-202ENST00000415164 KIAA1644Q3SXP7 199 aa11.26□□□□□ -0.61
UBXN4-202ENST00000415164 TINCRA0A1B0GVN0 87 aa11.24□□□□□ -0.61
UBXN4-202ENST00000415164 ADCYAP1P18509 176 aa11.24□□□□□ -0.61
UBXN4-202ENST00000415164 PRLHP81277 87 aa11.24□□□□□ -0.61
UBXN4-202ENST00000415164 ERASQ7Z444 233 aa11.24□□□□□ -0.61
UBXN4-202ENST00000415164 IGLV5-37A0A075B6J1 123 aa11.22□□□□□ -0.61
UBXN4-202ENST00000415164 PFN2P35080 140 aa11.22□□□□□ -0.61
UBXN4-202ENST00000415164 FAM229BQ4G0N7 80 aa11.22□□□□□ -0.61
UBXN4-202ENST00000415164 LCE2AQ5TA79 106 aaPredicted RBP11.22□□□□□ -0.61
UBXN4-202ENST00000415164 FAM19A1Q7Z5A9 133 aa11.22□□□□□ -0.61
UBXN4-202ENST00000415164 KRTAP13-1Q8IUC0 172 aa11.22□□□□□ -0.61
UBXN4-202ENST00000415164 IGLV7-46A0A075B6I9 117 aa11.21□□□□□ -0.61
UBXN4-202ENST00000415164 ATP5LO75964 103 aa11.21□□□□□ -0.61
UBXN4-202ENST00000415164 IGLV5-45A0A087WSX0 123 aa11.18□□□□□ -0.62
UBXN4-202ENST00000415164 TMEM238C9JI98 176 aa11.18□□□□□ -0.62
UBXN4-202ENST00000415164 CST9LQ9H4G1 147 aa11.18□□□□□ -0.62
UBXN4-202ENST00000415164 H3BRM9 83 aa11.17□□□□□ -0.62
UBXN4-202ENST00000415164 TPRXLQ17RH7 258 aa11.17□□□□□ -0.62
UBXN4-202ENST00000415164 TMEM126AQ9H061 195 aa11.16□□□□□ -0.62
UBXN4-202ENST00000415164 PMVKQ15126 192 aa11.15□□□□□ -0.62
UBXN4-202ENST00000415164 C3orf22Q8N5N4 141 aa11.15□□□□□ -0.62
UBXN4-202ENST00000415164 MRPL18Q9H0U6 180 aaKnown RBP11.15□□□□□ -0.62
UBXN4-202ENST00000415164 NDUFA6P56556 154 aa11.14□□□□□ -0.63
UBXN4-202ENST00000415164 RAB14P61106 215 aa11.13□□□□□ -0.63
UBXN4-202ENST00000415164 FA2HQ7L5A8 372 aa11.13□□□□□ -0.63
UBXN4-202ENST00000415164 CBLN2Q8IUK8 224 aa11.13□□□□□ -0.63
UBXN4-202ENST00000415164 ZNF625Q96I27 306 aaPredicted RBP11.13□□□□□ -0.63
UBXN4-202ENST00000415164 PPDPFQ9H3Y8 114 aa11.13□□□□□ -0.63
UBXN4-202ENST00000415164 SMCO4Q9NRQ5 59 aa11.13□□□□□ -0.63
UBXN4-202ENST00000415164 LINC01549A6NIU2 74 aa11.12□□□□□ -0.63
UBXN4-202ENST00000415164 VPREB1P12018 145 aa11.12□□□□□ -0.63
UBXN4-202ENST00000415164 RPL24P83731 157 aaKnown RBP11.12□□□□□ -0.63
UBXN4-202ENST00000415164 HIGD2AQ9BW72 106 aa11.12□□□□□ -0.63
UBXN4-202ENST00000415164 SND1-IT1Q9HBX3 110 aa11.12□□□□□ -0.63
UBXN4-202ENST00000415164 KRTAP9-6A0A140TA67 174 aa11.11□□□□□ -0.63
UBXN4-202ENST00000415164 ERG28Q9UKR5 140 aa11.11□□□□□ -0.63
UBXN4-202ENST00000415164 M0R378 163 aa11.1□□□□□ -0.63
UBXN4-202ENST00000415164 PLEKHB2Q96CS7 222 aa11.1□□□□□ -0.63
UBXN4-202ENST00000415164 IGLV5-39A0A0G2JS06 123 aa11.06□□□□□ -0.64
UBXN4-202ENST00000415164 IGLC3P0DOY3 106 aa11.06□□□□□ -0.64
UBXN4-202ENST00000415164 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
UBXN4-202ENST00000415164 S100PP25815 95 aa11.06□□□□□ -0.64
UBXN4-202ENST00000415164 C4orf48Q5BLP8 95 aa11.06□□□□□ -0.64
UBXN4-202ENST00000415164 LINC01546A6NGU7 62 aa11.05□□□□□ -0.64
UBXN4-202ENST00000415164 LINC00337Q8N6G1 96 aa11.05□□□□□ -0.64
UBXN4-202ENST00000415164 Q8NDZ9 215 aa11.05□□□□□ -0.64
UBXN4-202ENST00000415164 TRAV9-1A0A075B6T8 112 aa11.04□□□□□ -0.64
UBXN4-202ENST00000415164 FABP9Q0Z7S8 132 aa11.04□□□□□ -0.64
UBXN4-202ENST00000415164 GNB1LQ9BYB4 327 aa11.04□□□□□ -0.64
UBXN4-202ENST00000415164 A0A0U1RRA0 63 aa11.03□□□□□ -0.64
UBXN4-202ENST00000415164 CTAG1AP78358 180 aa11.03□□□□□ -0.64
UBXN4-202ENST00000415164 COX17Q14061 63 aa11.03□□□□□ -0.64
UBXN4-202ENST00000415164 SPAG11AQ6PDA7 123 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms