RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 C6orf226Q5I0X4 101 aa6.36□□□□□ -1.39
RIF1-202ENST00000414861 C1orf134Q5TEV5 83 aa6.36□□□□□ -1.39
RIF1-202ENST00000414861 LRCOL1A6NCL2 159 aa6.35□□□□□ -1.39
RIF1-202ENST00000414861 C10orf25Q5T742 122 aa6.35□□□□□ -1.39
RIF1-202ENST00000414861 CFAP161Q6P656 301 aa6.35□□□□□ -1.39
RIF1-202ENST00000414861 C2orf91Q6ZV80 131 aa6.35□□□□□ -1.39
RIF1-202ENST00000414861 TSTD3H0UI37 97 aa6.35□□□□□ -1.39
RIF1-202ENST00000414861 NTN5Q8WTR8 489 aaPredicted RBP6.35□□□□□ -1.39
RIF1-202ENST00000414861 UQCR10Q9UDW1 63 aa6.35□□□□□ -1.39
RIF1-202ENST00000414861 ZNF561-AS1K7EIQ3 104 aa6.34□□□□□ -1.39
RIF1-202ENST00000414861 DLEU1O43261 78 aa6.34□□□□□ -1.39
RIF1-202ENST00000414861 UNQ6190/PRO20217Q6UXQ8 127 aa6.34□□□□□ -1.39
RIF1-202ENST00000414861 A0A0J9YXY3 114 aa6.34□□□□□ -1.39
RIF1-202ENST00000414861 SLPIP03973 132 aa6.34□□□□□ -1.39
RIF1-202ENST00000414861 CKS1BP61024 79 aa6.34□□□□□ -1.39
RIF1-202ENST00000414861 MIEN1Q9BRT3 115 aa6.34□□□□□ -1.39
RIF1-202ENST00000414861 HECTD4Q9Y4D8 3996 aa6.34□□□□□ -1.4
RIF1-202ENST00000414861 FAT2Q9NYQ8 4349 aa6.33□□□□□ -1.4
RIF1-202ENST00000414861 RTL8CO15255 209 aa6.33□□□□□ -1.4
RIF1-202ENST00000414861 CXCL5P42830 114 aa6.33□□□□□ -1.4
RIF1-202ENST00000414861 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
RIF1-202ENST00000414861 SCGB1D4Q6XE38 83 aa6.33□□□□□ -1.4
RIF1-202ENST00000414861 Q6ZRU5 148 aa6.33□□□□□ -1.4
RIF1-202ENST00000414861 CAMK2N2Q96S95 79 aa6.32□□□□□ -1.4
RIF1-202ENST00000414861 PCP4L1A6NKN8 68 aa6.32□□□□□ -1.4
RIF1-202ENST00000414861 C2orf48Q96LS8 159 aa6.32□□□□□ -1.4
RIF1-202ENST00000414861 LITAFQ99732 161 aa6.32□□□□□ -1.4
RIF1-202ENST00000414861 C6orf48Q9UBA6 75 aa6.32□□□□□ -1.4
RIF1-202ENST00000414861 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.31□□□□□ -1.4
RIF1-202ENST00000414861 A0A087WTM6 91 aa6.31□□□□□ -1.4
RIF1-202ENST00000414861 A0A0U1RRA0 63 aa6.31□□□□□ -1.4
RIF1-202ENST00000414861 HNRNPA3P51991 378 aaKnown RBP6.31□□□□□ -1.4
RIF1-202ENST00000414861 DDTP30046 118 aa6.31□□□□□ -1.4
RIF1-202ENST00000414861 HERV-K104P63124 156 aa6.31□□□□□ -1.4
RIF1-202ENST00000414861 TNP2Q05952 138 aa6.31□□□□□ -1.4
RIF1-202ENST00000414861 ADAMTSL4-AS1Q5T5F5 129 aa6.31□□□□□ -1.4
RIF1-202ENST00000414861 DAND5Q8N907 189 aa6.31□□□□□ -1.4
RIF1-202ENST00000414861 SMIM13P0DJ93 91 aa6.3□□□□□ -1.4
RIF1-202ENST00000414861 SYCNQ0VAF6 134 aa6.3□□□□□ -1.4
RIF1-202ENST00000414861 MEIG1Q5JSS6 88 aa6.3□□□□□ -1.4
RIF1-202ENST00000414861 DNAH11Q96DT5 4516 aa6.3□□□□□ -1.4
RIF1-202ENST00000414861 PFN2P35080 140 aa6.3□□□□□ -1.4
RIF1-202ENST00000414861 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
RIF1-202ENST00000414861 HIGD1BQ9P298 99 aa6.3□□□□□ -1.4
RIF1-202ENST00000414861 ERG28Q9UKR5 140 aa6.3□□□□□ -1.4
RIF1-202ENST00000414861 Q8N814 137 aa6.29□□□□□ -1.4
RIF1-202ENST00000414861 CARD19Q96LW7 228 aa6.29□□□□□ -1.4
RIF1-202ENST00000414861 RYR3Q15413 4870 aa6.29□□□□□ -1.4
RIF1-202ENST00000414861 FUSP35637 526 aaKnown RBP eCLIP6.29□□□□□ -1.4
RIF1-202ENST00000414861 C14orf177Q52M58 125 aa6.29□□□□□ -1.4
RIF1-202ENST00000414861 TRBV30A0A0K0K1B3 111 aa6.28□□□□□ -1.4
RIF1-202ENST00000414861 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
RIF1-202ENST00000414861 CTAG1AP78358 180 aa6.28□□□□□ -1.4
RIF1-202ENST00000414861 TIMM17BO60830 172 aa6.28□□□□□ -1.4
RIF1-202ENST00000414861 CNBPP62633 177 aaKnown RBP6.28□□□□□ -1.4
RIF1-202ENST00000414861 TMEM238C9JI98 176 aa6.27□□□□□ -1.41
RIF1-202ENST00000414861 F8WDY8 70 aa6.27□□□□□ -1.41
RIF1-202ENST00000414861 LINC00158P58513 81 aa6.27□□□□□ -1.41
RIF1-202ENST00000414861 NPC2P61916 151 aa6.27□□□□□ -1.41
RIF1-202ENST00000414861 MIR7-3HGQ8N6C7 128 aa6.27□□□□□ -1.41
RIF1-202ENST00000414861 SPANXB1Q9NS25 103 aaPredicted RBP6.27□□□□□ -1.41
RIF1-202ENST00000414861 LINC01620Q4KN68 170 aa6.26□□□□□ -1.41
RIF1-202ENST00000414861 SOSTDC1Q6X4U4 206 aa6.26□□□□□ -1.41
RIF1-202ENST00000414861 HIST1H4GQ99525 98 aa6.26□□□□□ -1.41
RIF1-202ENST00000414861 SPANXDQ9BXN6 97 aa6.26□□□□□ -1.41
RIF1-202ENST00000414861 SPANXCQ9NY87 97 aa6.26□□□□□ -1.41
RIF1-202ENST00000414861 DNAH5Q8TE73 4624 aa6.26□□□□□ -1.41
RIF1-202ENST00000414861 SRSF9Q13242 221 aaKnown RBP eCLIP6.26□□□□□ -1.41
RIF1-202ENST00000414861 CIRBPQ14011 172 aaKnown RBP6.26□□□□□ -1.41
RIF1-202ENST00000414861 LINC00587B1AMM8 73 aa6.25□□□□□ -1.41
RIF1-202ENST00000414861 HSD52Q0P140 79 aa6.25□□□□□ -1.41
RIF1-202ENST00000414861 COX17Q14061 63 aa6.25□□□□□ -1.41
RIF1-202ENST00000414861 PKD1P98161 4303 aa6.25□□□□□ -1.41
RIF1-202ENST00000414861 Q6ZRP5 223 aa6.25□□□□□ -1.41
RIF1-202ENST00000414861 NDUFC2-KCTD14E9PQ53 114 aa6.24□□□□□ -1.41
RIF1-202ENST00000414861 RNF151Q2KHN1 245 aa6.24□□□□□ -1.41
RIF1-202ENST00000414861 SND1-IT1Q9HBX3 110 aa6.24□□□□□ -1.41
RIF1-202ENST00000414861 PKHD1P08F94 4074 aa6.24□□□□□ -1.41
RIF1-202ENST00000414861 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.24□□□□□ -1.41
RIF1-202ENST00000414861 GCSHP23434 173 aa6.24□□□□□ -1.41
RIF1-202ENST00000414861 HINT1P49773 126 aaPredicted RBP6.24□□□□□ -1.41
RIF1-202ENST00000414861 FXYD2P54710 66 aa6.24□□□□□ -1.41
RIF1-202ENST00000414861 KRTAP10-2P60368 255 aa6.24□□□□□ -1.41
RIF1-202ENST00000414861 MUSTN1Q8IVN3 82 aa6.24□□□□□ -1.41
RIF1-202ENST00000414861 LINC00308Q8TCZ7 52 aa6.24□□□□□ -1.41
RIF1-202ENST00000414861 XAGE1AQ9HD64 81 aa6.24□□□□□ -1.41
RIF1-202ENST00000414861 RPL18AQ02543 176 aaKnown RBP6.23□□□□□ -1.41
RIF1-202ENST00000414861 GAGE2EQ4V326 116 aa6.23□□□□□ -1.41
RIF1-202ENST00000414861 CEND1Q8N111 149 aa6.23□□□□□ -1.41
RIF1-202ENST00000414861 C9orf163Q8N9P6 203 aa6.23□□□□□ -1.41
RIF1-202ENST00000414861 GAGE2DQ9UEU5 116 aa6.23□□□□□ -1.41
RIF1-202ENST00000414861 TLX1NBP0CAT3 122 aa6.23□□□□□ -1.41
RIF1-202ENST00000414861 TAL2Q16559 108 aa6.23□□□□□ -1.41
RIF1-202ENST00000414861 BVES-AS1Q5T3Y7 98 aa6.22□□□□□ -1.41
RIF1-202ENST00000414861 Q6ZVH6 145 aa6.22□□□□□ -1.41
RIF1-202ENST00000414861 Q8NDZ9 215 aa6.22□□□□□ -1.41
RIF1-202ENST00000414861 A0A096LNI7 61 aa6.21□□□□□ -1.42
RIF1-202ENST00000414861 LOC107984640A0A0U1RRK4 108 aa6.21□□□□□ -1.42
RIF1-202ENST00000414861 EREGO14944 169 aa6.21□□□□□ -1.42
RIF1-202ENST00000414861 PTTG1IPP53801 180 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms