RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 C6orf48Q9UBA6 75 aa11.81□□□□□ -0.52
TRIM56-202ENST00000412507 LINC01549A6NIU2 74 aa11.8□□□□□ -0.52
TRIM56-202ENST00000412507 HERVK_113P63121 156 aa11.8□□□□□ -0.52
TRIM56-202ENST00000412507 BAGE3Q86Y29 109 aa11.8□□□□□ -0.52
TRIM56-202ENST00000412507 A0A1W2PNN7 141 aa11.79□□□□□ -0.52
TRIM56-202ENST00000412507 SEC11AP67812 179 aa11.79□□□□□ -0.52
TRIM56-202ENST00000412507 C2orf82Q6UX34 121 aa11.79□□□□□ -0.52
TRIM56-202ENST00000412507 URB1-AS1Q96HZ7 61 aa11.79□□□□□ -0.52
TRIM56-202ENST00000412507 GEMIN7Q9H840 131 aaKnown RBP11.79□□□□□ -0.52
TRIM56-202ENST00000412507 CDKN2A-AS1Q9UH64 79 aa11.79□□□□□ -0.52
TRIM56-202ENST00000412507 TOMM7Q9P0U1 55 aa11.78□□□□□ -0.52
TRIM56-202ENST00000412507 LINC00614P0C842 121 aa11.77□□□□□ -0.53
TRIM56-202ENST00000412507 CHCHD1Q96BP2 118 aaKnown RBP11.77□□□□□ -0.53
TRIM56-202ENST00000412507 PRSS2P07478 247 aa11.76□□□□□ -0.53
TRIM56-202ENST00000412507 TLX1NBP0CAT3 122 aa11.76□□□□□ -0.53
TRIM56-202ENST00000412507 C9orf116Q5BN46 136 aaPredicted RBP11.76□□□□□ -0.53
TRIM56-202ENST00000412507 Q6ZRP5 223 aa11.76□□□□□ -0.53
TRIM56-202ENST00000412507 A0A096LNJ9 63 aa11.75□□□□□ -0.53
TRIM56-202ENST00000412507 TRBV30A0A0K0K1B3 111 aa11.75□□□□□ -0.53
TRIM56-202ENST00000412507 PRR3P79522 188 aaKnown RBP11.75□□□□□ -0.53
TRIM56-202ENST00000412507 PACRGQ96M98 296 aaPredicted RBP11.75□□□□□ -0.53
TRIM56-202ENST00000412507 CST9LQ9H4G1 147 aa11.75□□□□□ -0.53
TRIM56-202ENST00000412507 TINCRA0A1B0GVN0 87 aa11.74□□□□□ -0.53
TRIM56-202ENST00000412507 OXTP01178 125 aa11.74□□□□□ -0.53
TRIM56-202ENST00000412507 PMVKQ15126 192 aa11.74□□□□□ -0.53
TRIM56-202ENST00000412507 GAGE2EQ4V326 116 aa11.74□□□□□ -0.53
TRIM56-202ENST00000412507 C6orf226Q5I0X4 101 aa11.74□□□□□ -0.53
TRIM56-202ENST00000412507 Q8IZM0 81 aa11.74□□□□□ -0.53
TRIM56-202ENST00000412507 LINC00469Q8N7U9 141 aa11.74□□□□□ -0.53
TRIM56-202ENST00000412507 GAGE2DQ9UEU5 116 aa11.74□□□□□ -0.53
TRIM56-202ENST00000412507 S100A6P06703 90 aa11.73□□□□□ -0.53
TRIM56-202ENST00000412507 PMCHL1Q16048 86 aa11.73□□□□□ -0.53
TRIM56-202ENST00000412507 COA6Q5JTJ3 125 aaKnown RBP11.73□□□□□ -0.53
TRIM56-202ENST00000412507 HSBP1O75506 76 aa11.72□□□□□ -0.53
TRIM56-202ENST00000412507 SERF1AO75920 110 aa11.72□□□□□ -0.53
TRIM56-202ENST00000412507 NDUFA6P56556 154 aa11.72□□□□□ -0.53
TRIM56-202ENST00000412507 CKS1BP61024 79 aa11.72□□□□□ -0.53
TRIM56-202ENST00000412507 HBDP02042 147 aa11.71□□□□□ -0.53
TRIM56-202ENST00000412507 IGLV5-45A0A087WSX0 123 aa11.7□□□□□ -0.54
TRIM56-202ENST00000412507 FAM168BA1KXE4 195 aa11.7□□□□□ -0.54
TRIM56-202ENST00000412507 SMIM1B2RUZ4 78 aa11.7□□□□□ -0.54
TRIM56-202ENST00000412507 PHF5AQ7RTV0 110 aaKnown RBP11.7□□□□□ -0.54
TRIM56-202ENST00000412507 NDUFC2-KCTD14E9PQ53 114 aa11.69□□□□□ -0.54
TRIM56-202ENST00000412507 PDZD11Q5EBL8 140 aa11.68□□□□□ -0.54
TRIM56-202ENST00000412507 SPINK8P0C7L1 97 aa11.67□□□□□ -0.54
TRIM56-202ENST00000412507 FAM19A5Q7Z5A7 132 aaPredicted RBP11.67□□□□□ -0.54
TRIM56-202ENST00000412507 COX7B2Q8TF08 81 aa11.67□□□□□ -0.54
TRIM56-202ENST00000412507 F8VRH5 84 aa11.66□□□□□ -0.54
TRIM56-202ENST00000412507 LINC00310P59036 64 aa11.66□□□□□ -0.54
TRIM56-202ENST00000412507 C9orf129Q5T035 196 aaKnown RBP11.66□□□□□ -0.54
TRIM56-202ENST00000412507 TMA7Q9Y2S6 64 aaKnown RBP11.66□□□□□ -0.54
TRIM56-202ENST00000412507 IGLC3P0DOY3 106 aa11.65□□□□□ -0.54
TRIM56-202ENST00000412507 CXCL5P42830 114 aa11.65□□□□□ -0.54
TRIM56-202ENST00000412507 PSORS1C2Q9UIG4 136 aa11.65□□□□□ -0.54
TRIM56-202ENST00000412507 ATP5LO75964 103 aa11.64□□□□□ -0.55
TRIM56-202ENST00000412507 KRTAP7-1Q8IUC3 87 aa11.64□□□□□ -0.55
TRIM56-202ENST00000412507 H3BRM9 83 aa11.63□□□□□ -0.55
TRIM56-202ENST00000412507 NUPR1O60356 82 aa11.63□□□□□ -0.55
TRIM56-202ENST00000412507 S100A2P29034 98 aa11.62□□□□□ -0.55
TRIM56-202ENST00000412507 FAM19A2Q8N3H0 131 aa11.62□□□□□ -0.55
TRIM56-202ENST00000412507 C5orf52A6NGY3 159 aa11.61□□□□□ -0.55
TRIM56-202ENST00000412507 ZNF22P17026 224 aaPredicted RBP11.61□□□□□ -0.55
TRIM56-202ENST00000412507 SNRPEP62304 92 aaKnown RBP11.61□□□□□ -0.55
TRIM56-202ENST00000412507 SRSF9Q13242 221 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRIM56-202ENST00000412507 SPINK6Q6UWN8 80 aa11.61□□□□□ -0.55
TRIM56-202ENST00000412507 KRTAP11-1Q8IUC1 163 aa11.61□□□□□ -0.55
TRIM56-202ENST00000412507 HSPB8Q9UJY1 196 aa11.61□□□□□ -0.55
TRIM56-202ENST00000412507 M0QXV9 152 aa11.6□□□□□ -0.55
TRIM56-202ENST00000412507 LEPROTL1O95214 131 aa11.6□□□□□ -0.55
TRIM56-202ENST00000412507 C1orf137Q5JT78 98 aa11.6□□□□□ -0.55
TRIM56-202ENST00000412507 XAGE1AQ9HD64 81 aa11.6□□□□□ -0.55
TRIM56-202ENST00000412507 C11orf86A6NJI1 115 aa11.59□□□□□ -0.55
TRIM56-202ENST00000412507 MT1HL1P0DM35 61 aa11.59□□□□□ -0.55
TRIM56-202ENST00000412507 HIST3H2BBQ8N257 126 aa11.59□□□□□ -0.55
TRIM56-202ENST00000412507 IGLV5-39A0A0G2JS06 123 aa11.57□□□□□ -0.56
TRIM56-202ENST00000412507 SERTAD4-AS1Q5TG53 156 aa11.57□□□□□ -0.56
TRIM56-202ENST00000412507 IFI27L1Q96BM0 104 aa11.57□□□□□ -0.56
TRIM56-202ENST00000412507 CHTOPQ9Y3Y2 248 aaKnown RBP11.57□□□□□ -0.56
TRIM56-202ENST00000412507 UBE2BP63146 152 aa11.56□□□□□ -0.56
TRIM56-202ENST00000412507 TMEM170BQ5T4T1 132 aa11.56□□□□□ -0.56
TRIM56-202ENST00000412507 FABP4P15090 132 aa11.55□□□□□ -0.56
TRIM56-202ENST00000412507 REG3GQ6UW15 175 aa11.54□□□□□ -0.56
TRIM56-202ENST00000412507 HIST1H2BLQ99880 126 aa11.54□□□□□ -0.56
TRIM56-202ENST00000412507 C22orf24Q9Y442 160 aa11.54□□□□□ -0.56
TRIM56-202ENST00000412507 TNXBP22105 4242 aa11.53□□□□□ -0.56
TRIM56-202ENST00000412507 TRAV12-1A0A0B4J245 112 aa11.53□□□□□ -0.56
TRIM56-202ENST00000412507 IGLV7-43P04211 117 aa11.53□□□□□ -0.56
TRIM56-202ENST00000412507 LINC01600Q96MT4 127 aa11.53□□□□□ -0.56
TRIM56-202ENST00000412507 MAP1LC3CQ9BXW4 147 aa11.53□□□□□ -0.56
TRIM56-202ENST00000412507 PFN2P35080 140 aa11.5□□□□□ -0.57
TRIM56-202ENST00000412507 ZNF625Q96I27 306 aaPredicted RBP11.49□□□□□ -0.57
TRIM56-202ENST00000412507 TMEM223A0PJW6 202 aa11.48□□□□□ -0.57
TRIM56-202ENST00000412507 H0Y8G0 127 aa11.48□□□□□ -0.57
TRIM56-202ENST00000412507 LBHQ53QV2 105 aaPredicted RBP11.48□□□□□ -0.57
TRIM56-202ENST00000412507 SYS1-DBNDD2H3BUS1 97 aa11.47□□□□□ -0.57
TRIM56-202ENST00000412507 KRTDAPP60985 99 aa11.47□□□□□ -0.57
TRIM56-202ENST00000412507 PET117Q6UWS5 81 aa11.47□□□□□ -0.57
TRIM56-202ENST00000412507 MRPL55Q7Z7F7 128 aaKnown RBP11.47□□□□□ -0.57
TRIM56-202ENST00000412507 TP73-AS1Q9UF72 201 aa11.47□□□□□ -0.57
TRIM56-202ENST00000412507 ERG28Q9UKR5 140 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms