RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 C9orf116Q5BN46 136 aaPredicted RBP9.27□□□□□ -0.93
RNF43-201ENST00000407977 C2orf48Q96LS8 159 aa9.27□□□□□ -0.93
RNF43-201ENST00000407977 FHL2Q14192 279 aa9.26□□□□□ -0.93
RNF43-201ENST00000407977 OTOGLQ3ZCN5 2332 aa9.25□□□□□ -0.93
RNF43-201ENST00000407977 PSPHP1O15172 72 aa9.25□□□□□ -0.93
RNF43-201ENST00000407977 PRR3P79522 188 aaKnown RBP9.25□□□□□ -0.93
RNF43-201ENST00000407977 LIMD2Q9BT23 127 aa9.25□□□□□ -0.93
RNF43-201ENST00000407977 NAV2Q8IVL1 2488 aa9.25□□□□□ -0.93
RNF43-201ENST00000407977 H0Y9P7 68 aa9.24□□□□□ -0.93
RNF43-201ENST00000407977 IGLV5-39A0A0G2JS06 123 aa9.24□□□□□ -0.93
RNF43-201ENST00000407977 HCG22E2RYF7 251 aa9.24□□□□□ -0.93
RNF43-201ENST00000407977 IGLV1-51P01701 117 aa9.24□□□□□ -0.93
RNF43-201ENST00000407977 INAFM1C9JVW0 142 aa9.23□□□□□ -0.93
RNF43-201ENST00000407977 IGHV4-30-4P0DP06 118 aa9.23□□□□□ -0.93
RNF43-201ENST00000407977 LINC00337Q8N6G1 96 aa9.23□□□□□ -0.93
RNF43-201ENST00000407977 KIF25-AS1Q9Y6Z4 181 aa9.23□□□□□ -0.93
RNF43-201ENST00000407977 A0A1B0GW54 56 aa9.21□□□□□ -0.93
RNF43-201ENST00000407977 PRO0461Q9UI25 63 aa9.21□□□□□ -0.93
RNF43-201ENST00000407977 NANOS2P60321 138 aaKnown RBP9.21□□□□□ -0.94
RNF43-201ENST00000407977 MUC22E2RYF6 1773 aaPredicted RBP9.21□□□□□ -0.94
RNF43-201ENST00000407977 C6orf223Q8N319 242 aa9.21□□□□□ -0.94
RNF43-201ENST00000407977 A0A087WSZ3 146 aa9.2□□□□□ -0.94
RNF43-201ENST00000407977 SMCPP49901 116 aaPredicted RBP9.2□□□□□ -0.94
RNF43-201ENST00000407977 Q9BRP9 147 aa9.2□□□□□ -0.94
RNF43-201ENST00000407977 EDN2P20800 178 aa9.19□□□□□ -0.94
RNF43-201ENST00000407977 PRRC2AP48634 2157 aaKnown RBP9.19□□□□□ -0.94
RNF43-201ENST00000407977 SBSPONQ8IVN8 264 aa9.19□□□□□ -0.94
RNF43-201ENST00000407977 IGHV6-1A0A0B4J1U7 121 aa9.18□□□□□ -0.94
RNF43-201ENST00000407977 Q6ZSN1 163 aa9.18□□□□□ -0.94
RNF43-201ENST00000407977 RETNQ9HD89 108 aa9.18□□□□□ -0.94
RNF43-201ENST00000407977 MYO9AB2RTY4 2548 aa9.18□□□□□ -0.94
RNF43-201ENST00000407977 AVPP01185 164 aa9.17□□□□□ -0.94
RNF43-201ENST00000407977 PCOTHQ58A44 107 aa9.17□□□□□ -0.94
RNF43-201ENST00000407977 HIVEP3Q5T1R4 2406 aa9.17□□□□□ -0.94
RNF43-201ENST00000407977 LY6G6DO95868 133 aa9.15□□□□□ -0.94
RNF43-201ENST00000407977 IGLV5-45A0A087WSX0 123 aa9.15□□□□□ -0.95
RNF43-201ENST00000407977 Q8N2B8 174 aa9.14□□□□□ -0.95
RNF43-201ENST00000407977 C1orf64Q8NEQ6 169 aa9.14□□□□□ -0.95
RNF43-201ENST00000407977 IGHV3OR16-9A0A0B4J2B5 98 aa9.13□□□□□ -0.95
RNF43-201ENST00000407977 SPATA3Q8NHX4 192 aa9.13□□□□□ -0.95
RNF43-201ENST00000407977 LINC00315P59091 139 aa9.13□□□□□ -0.95
RNF43-201ENST00000407977 TP53AIP1Q9HCN2 124 aa9.12□□□□□ -0.95
RNF43-201ENST00000407977 H3BPC8 53 aa9.12□□□□□ -0.95
RNF43-201ENST00000407977 C16orf95Q9H693 158 aa9.12□□□□□ -0.95
RNF43-201ENST00000407977 CCDC168Q8NDH2 2452 aa9.11□□□□□ -0.95
RNF43-201ENST00000407977 CIRBP-AS1Q8TBR5 109 aa9.1□□□□□ -0.95
RNF43-201ENST00000407977 LYPD5Q6UWN5 251 aa9.1□□□□□ -0.95
RNF43-201ENST00000407977 LRP4O75096 1905 aa9.1□□□□□ -0.95
RNF43-201ENST00000407977 C11orf72Q8NBR9 251 aa9.1□□□□□ -0.95
RNF43-201ENST00000407977 FAM19A4Q96LR4 140 aa9.1□□□□□ -0.95
RNF43-201ENST00000407977 SMIM29Q86T20 159 aa9.09□□□□□ -0.95
RNF43-201ENST00000407977 DOPEY1Q5JWR5 2465 aa9.09□□□□□ -0.95
RNF43-201ENST00000407977 PRO3102Q9H379 93 aa9.09□□□□□ -0.95
RNF43-201ENST00000407977 A8MTW9 85 aa9.09□□□□□ -0.95
RNF43-201ENST00000407977 Q6ZRU5 148 aa9.09□□□□□ -0.95
RNF43-201ENST00000407977 LOC110117498A0A087WWA1 95 aa9.09□□□□□ -0.95
RNF43-201ENST00000407977 M0R2N4 97 aa9.09□□□□□ -0.95
RNF43-201ENST00000407977 NUPR2A6NF83 97 aa9.09□□□□□ -0.96
RNF43-201ENST00000407977 CDSNQ15517 529 aa9.07□□□□□ -0.96
RNF43-201ENST00000407977 Q6ZTC4 211 aa9.07□□□□□ -0.96
RNF43-201ENST00000407977 AGRNO00468 2067 aa9.07□□□□□ -0.96
RNF43-201ENST00000407977 C4orf26Q17RF5 130 aa9.06□□□□□ -0.96
RNF43-201ENST00000407977 KIAA0087Q14695 138 aa9.06□□□□□ -0.96
RNF43-201ENST00000407977 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
RNF43-201ENST00000407977 ABCA2Q9BZC7 2435 aa9.05□□□□□ -0.96
RNF43-201ENST00000407977 DEFB116Q30KQ4 102 aa9.05□□□□□ -0.96
RNF43-201ENST00000407977 Q6ZQT0 140 aa9.05□□□□□ -0.96
RNF43-201ENST00000407977 FAM218AQ96MZ4 157 aa9.04□□□□□ -0.96
RNF43-201ENST00000407977 SMCR5Q8TEV8 140 aa9.04□□□□□ -0.96
RNF43-201ENST00000407977 C22orf24Q9Y442 160 aa9.04□□□□□ -0.96
RNF43-201ENST00000407977 LINC01556Q5JQF7 62 aa9.03□□□□□ -0.96
RNF43-201ENST00000407977 CEP192Q8TEP8 1941 aa9.03□□□□□ -0.96
RNF43-201ENST00000407977 A0A1B0GU69 56 aa9.03□□□□□ -0.96
RNF43-201ENST00000407977 ACYP2P14621 99 aa9.03□□□□□ -0.96
RNF43-201ENST00000407977 ELOF1P60002 83 aaKnown RBP9.02□□□□□ -0.96
RNF43-201ENST00000407977 CPAMD8Q8IZJ3 1885 aa9.01□□□□□ -0.97
RNF43-201ENST00000407977 SPINK1P00995 79 aa9.01□□□□□ -0.97
RNF43-201ENST00000407977 PTPRSQ13332 1948 aa9.01□□□□□ -0.97
RNF43-201ENST00000407977 LY6G6CO95867 125 aa9.01□□□□□ -0.97
RNF43-201ENST00000407977 Q8NBF4 154 aa9□□□□□ -0.97
RNF43-201ENST00000407977 COL5A1P20908 1838 aaPredicted RBP9□□□□□ -0.97
RNF43-201ENST00000407977 IGLV5-52A0A0A0MRZ9 124 aa9□□□□□ -0.97
RNF43-201ENST00000407977 ERC2-IT1O76042 136 aa9□□□□□ -0.97
RNF43-201ENST00000407977 PRLHP81277 87 aa9□□□□□ -0.97
RNF43-201ENST00000407977 ADAMTS20P59510 1910 aa9□□□□□ -0.97
RNF43-201ENST00000407977 SPAG11AQ6PDA7 123 aa9□□□□□ -0.97
RNF43-201ENST00000407977 A0A1W2PPR1 153 aa8.98□□□□□ -0.97
RNF43-201ENST00000407977 X6R8D5 127 aa8.97□□□□□ -0.97
RNF43-201ENST00000407977 C6orf48Q9UBA6 75 aa8.97□□□□□ -0.97
RNF43-201ENST00000407977 Q9UF83 564 aa8.96□□□□□ -0.97
RNF43-201ENST00000407977 PIEZO2Q9H5I5 2752 aa8.96□□□□□ -0.98
RNF43-201ENST00000407977 LINC00167Q96N53 147 aa8.95□□□□□ -0.98
RNF43-201ENST00000407977 RETNLBQ9BQ08 111 aa8.95□□□□□ -0.98
RNF43-201ENST00000407977 TRAV22A0A0B4J277 110 aa8.95□□□□□ -0.98
RNF43-201ENST00000407977 SERTAD4-AS1Q5TG53 156 aa8.95□□□□□ -0.98
RNF43-201ENST00000407977 H3BNG1 76 aa8.95□□□□□ -0.98
RNF43-201ENST00000407977 TM2D3Q9BRN9 247 aa8.94□□□□□ -0.98
RNF43-201ENST00000407977 TLN1Q9Y490 2541 aaKnown RBP8.94□□□□□ -0.98
RNF43-201ENST00000407977 LITAFQ99732 161 aa8.94□□□□□ -0.98
RNF43-201ENST00000407977 RAI1Q7Z5J4 1906 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms