RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 FAM240AA0A1B0GVK7 77 aa8.38□□□□□ -1.07
RBM39-206ENST00000403542 MALP21145 153 aa8.38□□□□□ -1.07
RBM39-206ENST00000403542 FHL2Q14192 279 aa8.38□□□□□ -1.07
RBM39-206ENST00000403542 TRAV13-2A0A0B4J235 113 aa8.38□□□□□ -1.07
RBM39-206ENST00000403542 IGHV3OR16-9A0A0B4J2B5 98 aa8.38□□□□□ -1.07
RBM39-206ENST00000403542 NCR3O14931 201 aa8.38□□□□□ -1.07
RBM39-206ENST00000403542 TRACP01848 142 aa8.37□□□□□ -1.07
RBM39-206ENST00000403542 RNASE1P07998 156 aaKnown RBP8.37□□□□□ -1.07
RBM39-206ENST00000403542 PKD1L1Q8TDX9 2849 aa8.37□□□□□ -1.07
RBM39-206ENST00000403542 GYPEP15421 78 aa8.37□□□□□ -1.07
RBM39-206ENST00000403542 SDIM1Q6ZPB5 146 aa8.37□□□□□ -1.07
RBM39-206ENST00000403542 IGKV3D-7A0A0C4DH55 119 aa8.36□□□□□ -1.07
RBM39-206ENST00000403542 TRBV6-4A0A1B0GX49 114 aa8.36□□□□□ -1.07
RBM39-206ENST00000403542 C19orf73Q9NVV2 129 aa8.36□□□□□ -1.07
RBM39-206ENST00000403542 FAM19A3Q7Z5A8 133 aa8.36□□□□□ -1.07
RBM39-206ENST00000403542 CSNK1G2-AS1Q8NCQ2 148 aa8.36□□□□□ -1.07
RBM39-206ENST00000403542 RPL28P46779 137 aaKnown RBP8.35□□□□□ -1.07
RBM39-206ENST00000403542 SMR3AQ99954 134 aa8.35□□□□□ -1.07
RBM39-206ENST00000403542 LINC00959A0A1B0GUT2 108 aa8.35□□□□□ -1.07
RBM39-206ENST00000403542 C9orf116Q5BN46 136 aaPredicted RBP8.35□□□□□ -1.07
RBM39-206ENST00000403542 TRBV7-7A0A0K0K1E9 115 aa8.34□□□□□ -1.07
RBM39-206ENST00000403542 LINC00482Q8N8I6 264 aa8.34□□□□□ -1.07
RBM39-206ENST00000403542 LINC00526Q96FQ7 95 aa8.34□□□□□ -1.07
RBM39-206ENST00000403542 IGLV1-51P01701 117 aa8.34□□□□□ -1.07
RBM39-206ENST00000403542 HIVEP1P15822 2718 aa8.34□□□□□ -1.07
RBM39-206ENST00000403542 LINC00643Q86TS7 51 aa8.33□□□□□ -1.08
RBM39-206ENST00000403542 A0A087WVE0 104 aa8.32□□□□□ -1.08
RBM39-206ENST00000403542 A0A087WZ39 114 aa8.32□□□□□ -1.08
RBM39-206ENST00000403542 MRPL23Q16540 153 aaKnown RBP8.32□□□□□ -1.08
RBM39-206ENST00000403542 SPATA3Q8NHX4 192 aa8.32□□□□□ -1.08
RBM39-206ENST00000403542 KLK5Q9Y337 293 aaPredicted RBP8.32□□□□□ -1.08
RBM39-206ENST00000403542 ACYP1P07311 99 aa8.32□□□□□ -1.08
RBM39-206ENST00000403542 LINC00269Q8N2A0 174 aa8.32□□□□□ -1.08
RBM39-206ENST00000403542 INAFM2P0DMQ5 153 aa8.31□□□□□ -1.08
RBM39-206ENST00000403542 LRRC75A-AS1Q8N1F1 130 aa8.31□□□□□ -1.08
RBM39-206ENST00000403542 HTN3P15516 51 aa8.3□□□□□ -1.08
RBM39-206ENST00000403542 OVOL2Q9BRP0 275 aa8.3□□□□□ -1.08
RBM39-206ENST00000403542 LINC00846Q9NV44 126 aa8.3□□□□□ -1.08
RBM39-206ENST00000403542 IBA57-AS1B1ANH7 110 aa8.3□□□□□ -1.08
RBM39-206ENST00000403542 C9orf153Q5TBE3 101 aa8.3□□□□□ -1.08
RBM39-206ENST00000403542 TMEM86BQ8N661 226 aa8.3□□□□□ -1.08
RBM39-206ENST00000403542 PF4P02776 101 aa8.29□□□□□ -1.08
RBM39-206ENST00000403542 WFDC9Q8NEX5 89 aa8.29□□□□□ -1.08
RBM39-206ENST00000403542 SS18Q15532 418 aa8.28□□□□□ -1.08
RBM39-206ENST00000403542 DEFB135Q30KP9 77 aa8.28□□□□□ -1.08
RBM39-206ENST00000403542 ANGP03950 147 aaKnown RBP8.28□□□□□ -1.08
RBM39-206ENST00000403542 CXCL5P42830 114 aa8.28□□□□□ -1.08
RBM39-206ENST00000403542 FAM222AQ5U5X8 452 aa8.28□□□□□ -1.08
RBM39-206ENST00000403542 KRTAP10-3P60369 221 aa8.26□□□□□ -1.09
RBM39-206ENST00000403542 KRTAP1-1Q07627 177 aa8.26□□□□□ -1.09
RBM39-206ENST00000403542 HIST1H4AP62805 103 aaKnown RBP8.26□□□□□ -1.09
RBM39-206ENST00000403542 C6orf223Q8N319 242 aa8.26□□□□□ -1.09
RBM39-206ENST00000403542 H0YGX0 51 aa8.25□□□□□ -1.09
RBM39-206ENST00000403542 Q8NDZ9 215 aa8.25□□□□□ -1.09
RBM39-206ENST00000403542 NSD1Q96L73 2696 aaPredicted RBP8.25□□□□□ -1.09
RBM39-206ENST00000403542 CHCHD10Q8WYQ3 142 aaPredicted RBP8.24□□□□□ -1.09
RBM39-206ENST00000403542 IMUPQ9GZP8 106 aa8.24□□□□□ -1.09
RBM39-206ENST00000403542 ORMDL1Q9P0S3 153 aa8.24□□□□□ -1.09
RBM39-206ENST00000403542 X6R8D5 127 aa8.24□□□□□ -1.09
RBM39-206ENST00000403542 CYSTM1Q9H1C7 97 aa8.24□□□□□ -1.09
RBM39-206ENST00000403542 PRO0255Q9UI72 69 aa8.24□□□□□ -1.09
RBM39-206ENST00000403542 CMC4P56277 68 aaPredicted RBP8.23□□□□□ -1.09
RBM39-206ENST00000403542 C3orf22Q8N5N4 141 aa8.23□□□□□ -1.09
RBM39-206ENST00000403542 hADV29S1A0JD25 119 aa8.23□□□□□ -1.09
RBM39-206ENST00000403542 NANOS2P60321 138 aaKnown RBP8.23□□□□□ -1.09
RBM39-206ENST00000403542 C6orf99Q4VX62 202 aa8.23□□□□□ -1.09
RBM39-206ENST00000403542 C10orf25Q5T742 122 aa8.23□□□□□ -1.09
RBM39-206ENST00000403542 A0A1B0GX51 115 aa8.22□□□□□ -1.09
RBM39-206ENST00000403542 HILS1P60008 231 aa8.22□□□□□ -1.09
RBM39-206ENST00000403542 LOC107984640A0A0U1RRK4 108 aa8.22□□□□□ -1.09
RBM39-206ENST00000403542 FBN1P35555 2871 aaKnown RBP8.22□□□□□ -1.09
RBM39-206ENST00000403542 REG3AQ06141 175 aa8.21□□□□□ -1.09
RBM39-206ENST00000403542 UNQ6190/PRO20217Q6UXQ8 127 aa8.21□□□□□ -1.1
RBM39-206ENST00000403542 Q8IZM0 81 aa8.21□□□□□ -1.1
RBM39-206ENST00000403542 S100A7L2Q5SY68 101 aa8.2□□□□□ -1.1
RBM39-206ENST00000403542 CELA1Q9UNI1 258 aa8.2□□□□□ -1.1
RBM39-206ENST00000403542 PPDPFQ9H3Y8 114 aa8.2□□□□□ -1.1
RBM39-206ENST00000403542 UQCRQO14949 82 aa8.2□□□□□ -1.1
RBM39-206ENST00000403542 KIAA0087Q14695 138 aa8.2□□□□□ -1.1
RBM39-206ENST00000403542 Q8N814 137 aa8.2□□□□□ -1.1
RBM39-206ENST00000403542 NOTCH1P46531 2555 aa8.19□□□□□ -1.1
RBM39-206ENST00000403542 KIR2DL5BQ8NHK3 375 aa8.19□□□□□ -1.1
RBM39-206ENST00000403542 LINC01561Q8N1V8 128 aa8.19□□□□□ -1.1
RBM39-206ENST00000403542 C16orf95Q9H693 158 aa8.19□□□□□ -1.1
RBM39-206ENST00000403542 DAD1P61803 113 aa8.18□□□□□ -1.1
RBM39-206ENST00000403542 RPL18AQ02543 176 aaKnown RBP8.18□□□□□ -1.1
RBM39-206ENST00000403542 XAGE1AQ9HD64 81 aa8.18□□□□□ -1.1
RBM39-206ENST00000403542 KLK12Q9UKR0 248 aa8.18□□□□□ -1.1
RBM39-206ENST00000403542 IGHV4-28A0A0C4DH34 117 aa8.18□□□□□ -1.1
RBM39-206ENST00000403542 A0A1B0GUV1 79 aa8.18□□□□□ -1.1
RBM39-206ENST00000403542 CD164L2Q6UWJ8 174 aa8.18□□□□□ -1.1
RBM39-206ENST00000403542 BAHCC1Q9P281 2608 aa8.18□□□□□ -1.1
RBM39-206ENST00000403542 TENM3Q9P273 2699 aa8.18□□□□□ -1.1
RBM39-206ENST00000403542 TRAV23DV6A0A075B6W5 121 aa8.17□□□□□ -1.1
RBM39-206ENST00000403542 LY6G6DO95868 133 aa8.17□□□□□ -1.1
RBM39-206ENST00000403542 COX7CP15954 63 aa8.17□□□□□ -1.1
RBM39-206ENST00000403542 FAM19A1Q7Z5A9 133 aa8.17□□□□□ -1.1
RBM39-206ENST00000403542 FAM110AQ9BQ89 295 aa8.17□□□□□ -1.1
RBM39-206ENST00000403542 C2orf48Q96LS8 159 aa8.17□□□□□ -1.1
RBM39-206ENST00000403542 OBSCN-AS1Q96MR7 158 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms